RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 DNAH17Q9UFH2 4485 aa6.48□□□□□ -1.37
SNPH-203ENST00000614659 DNAH10Q8IVF4 4471 aa6.47□□□□□ -1.37
SNPH-203ENST00000614659 ZNF469Q96JG9 3925 aaPredicted RBP6.44□□□□□ -1.38
SNPH-203ENST00000614659 KRTAP10-12P60413 245 aa6.42□□□□□ -1.38
SNPH-203ENST00000614659 PLECQ15149 4684 aaKnown RBP6.41□□□□□ -1.38
SNPH-203ENST00000614659 DNAH3Q8TD57 4116 aa6.38□□□□□ -1.39
SNPH-203ENST00000614659 DNAH5Q8TE73 4624 aa6.37□□□□□ -1.39
SNPH-203ENST00000614659 DNAH11Q96DT5 4516 aa6.34□□□□□ -1.39
SNPH-203ENST00000614659 COL7A1Q02388 2944 aa6.33□□□□□ -1.4
SNPH-203ENST00000614659 LORP23490 312 aaPredicted RBP6.25□□□□□ -1.41
SNPH-203ENST00000614659 DYNC2H1Q8NCM8 4307 aaKnown RBP6.24□□□□□ -1.41
SNPH-203ENST00000614659 DNAH6Q9C0G6 4158 aa6.22□□□□□ -1.41
SNPH-203ENST00000614659 KRTAP12-3P60328 96 aa6.22□□□□□ -1.41
SNPH-203ENST00000614659 DYNC1H1Q14204 4646 aaKnown RBP6.2□□□□□ -1.42
SNPH-203ENST00000614659 ANK2Q01484 3957 aa6.2□□□□□ -1.42
SNPH-203ENST00000614659 MT1HP80294 61 aa6.18□□□□□ -1.42
SNPH-203ENST00000614659 LCE3AQ5TA76 89 aa6.18□□□□□ -1.42
SNPH-203ENST00000614659 SACSQ9NZJ4 4579 aa6.16□□□□□ -1.42
SNPH-203ENST00000614659 STARD9Q9P2P6 4700 aa6.16□□□□□ -1.42
SNPH-203ENST00000614659 DNAH8Q96JB1 4490 aa6.15□□□□□ -1.43
SNPH-203ENST00000614659 KRTAP8-1Q8IUC2 63 aa6.14□□□□□ -1.43
SNPH-203ENST00000614659 FAT2Q9NYQ8 4349 aa6.1□□□□□ -1.43
SNPH-203ENST00000614659 LRP1BQ9NZR2 4599 aa6.1□□□□□ -1.43
SNPH-203ENST00000614659 KRTAP4-1Q9BYQ7 146 aa6.07□□□□□ -1.44
SNPH-203ENST00000614659 CRCT1Q9UGL9 99 aa6.06□□□□□ -1.44
SNPH-203ENST00000614659 MT2AP02795 61 aa6.01□□□□□ -1.45
SNPH-203ENST00000614659 SPRR2GQ9BYE4 73 aa6.01□□□□□ -1.45
SNPH-203ENST00000614659 CMYA5Q8N3K9 4069 aa6.01□□□□□ -1.45
SNPH-203ENST00000614659 DNHD1Q96M86 4753 aa6.01□□□□□ -1.45
SNPH-203ENST00000614659 CSMD3Q7Z407 3707 aa5.97□□□□□ -1.45
SNPH-203ENST00000614659 PRKDCP78527 4128 aaKnown RBP5.94□□□□□ -1.46
SNPH-203ENST00000614659 DNAH7Q8WXX0 4024 aa5.88□□□□□ -1.47
SNPH-203ENST00000614659 FAT1Q14517 4588 aa5.87□□□□□ -1.47
SNPH-203ENST00000614659 MT1FP04733 61 aa5.83□□□□□ -1.48
SNPH-203ENST00000614659 KMT2AQ03164 3969 aa5.82□□□□□ -1.48
SNPH-203ENST00000614659 VPS13BQ7Z7G8 4022 aa5.82□□□□□ -1.48
SNPH-203ENST00000614659 KRTAP10-5P60370 271 aa5.79□□□□□ -1.48
SNPH-203ENST00000614659 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
SNPH-203ENST00000614659 HECTD4Q9Y4D8 3996 aa5.78□□□□□ -1.48
SNPH-203ENST00000614659 APOBP04114 4563 aaKnown RBP5.76□□□□□ -1.49
SNPH-203ENST00000614659 RYR2Q92736 4967 aa5.72□□□□□ -1.49
SNPH-203ENST00000614659 RYR1P21817 5038 aa5.72□□□□□ -1.49
SNPH-203ENST00000614659 SPRR2FQ96RM1 72 aa5.7□□□□□ -1.5
SNPH-203ENST00000614659 HERC1Q15751 4861 aa5.7□□□□□ -1.5
SNPH-203ENST00000614659 HSPG2P98160 4391 aa5.66□□□□□ -1.5
SNPH-203ENST00000614659 KRTAP10-7P60409 375 aaPredicted RBP5.65□□□□□ -1.5
SNPH-203ENST00000614659 RYR3Q15413 4870 aa5.64□□□□□ -1.51
SNPH-203ENST00000614659 KRTAP19-8Q3LI54 63 aa5.64□□□□□ -1.51
SNPH-203ENST00000614659 FAT3Q8TDW7 4589 aa5.64□□□□□ -1.51
SNPH-203ENST00000614659 KRTAP17-1Q9BYP8 105 aa5.63□□□□□ -1.51
SNPH-203ENST00000614659 BIRC6Q9NR09 4857 aa5.61□□□□□ -1.51
SNPH-203ENST00000614659 FRAS1Q86XX4 4008 aa5.58□□□□□ -1.52
SNPH-203ENST00000614659 MYCBP2O75592 4640 aa5.56□□□□□ -1.52
SNPH-203ENST00000614659 LYSTQ99698 3801 aa5.56□□□□□ -1.52
SNPH-203ENST00000614659 LCE3CQ5T5A8 94 aa5.56□□□□□ -1.52
SNPH-203ENST00000614659 KRTAP19-5Q3LI72 72 aa5.55□□□□□ -1.52
SNPH-203ENST00000614659 KRTAP19-1Q8IUB9 90 aa5.55□□□□□ -1.52
SNPH-203ENST00000614659 SPRR2EP22531 72 aa5.47□□□□□ -1.53
SNPH-203ENST00000614659 SPRR2BP35325 72 aa5.47□□□□□ -1.53
SNPH-203ENST00000614659 SPRR2AP35326 72 aa5.47□□□□□ -1.53
SNPH-203ENST00000614659 KIAA1109Q2LD37 5005 aa5.46□□□□□ -1.54
SNPH-203ENST00000614659 PKHD1L1Q86WI1 4243 aa5.42□□□□□ -1.54
SNPH-203ENST00000614659 LRP1Q07954 4544 aaKnown RBP5.41□□□□□ -1.54
SNPH-203ENST00000614659 PKD1P98161 4303 aa5.41□□□□□ -1.54
SNPH-203ENST00000614659 HYDINQ4G0P3 5121 aa5.4□□□□□ -1.54
SNPH-203ENST00000614659 SPRR5A0A1B0GTR4 108 aa5.4□□□□□ -1.54
SNPH-203ENST00000614659 MT1XP80297 61 aa5.39□□□□□ -1.55
SNPH-203ENST00000614659 KRTAP9-8Q9BYQ0 159 aa5.39□□□□□ -1.55
SNPH-203ENST00000614659 MT1BP07438 61 aa5.35□□□□□ -1.55
SNPH-203ENST00000614659 SPRR2DP22532 72 aa5.33□□□□□ -1.56
SNPH-203ENST00000614659 LCE2CQ5TA81 110 aa5.33□□□□□ -1.56
SNPH-203ENST00000614659 KRTAP9-3Q9BYQ3 159 aa5.32□□□□□ -1.56
SNPH-203ENST00000614659 HERC2O95714 4834 aa5.31□□□□□ -1.56
SNPH-203ENST00000614659 PKHD1P08F94 4074 aa5.29□□□□□ -1.56
SNPH-203ENST00000614659 LCE2BO14633 110 aa5.28□□□□□ -1.56
SNPH-203ENST00000614659 TNXBP22105 4242 aa5.25□□□□□ -1.57
SNPH-203ENST00000614659 KRTAP19-2Q3LHN2 52 aa5.21□□□□□ -1.58
SNPH-203ENST00000614659 PCLOQ9Y6V0 5065 aa5.21□□□□□ -1.58
SNPH-203ENST00000614659 MT1GP13640 62 aa5.19□□□□□ -1.58
SNPH-203ENST00000614659 MUC17Q685J3 4493 aa5.17□□□□□ -1.58
SNPH-203ENST00000614659 KRTAP12-4P60329 112 aa5.15□□□□□ -1.59
SNPH-203ENST00000614659 LCE2DQ5TA82 110 aaPredicted RBP5.14□□□□□ -1.59
SNPH-203ENST00000614659 LRP2P98164 4655 aa5.11□□□□□ -1.59
SNPH-203ENST00000614659 KRTAP9-2Q9BYQ4 174 aa5.1□□□□□ -1.59
SNPH-203ENST00000614659 KRTAP19-6Q3LI70 58 aa5.04□□□□□ -1.6
SNPH-203ENST00000614659 FLGP20930 4061 aaPredicted RBP5.02□□□□□ -1.61
SNPH-203ENST00000614659 KMT2CQ8NEZ4 4911 aaKnown RBP5□□□□□ -1.61
SNPH-203ENST00000614659 LCE3BQ5TA77 95 aa4.97□□□□□ -1.61
SNPH-203ENST00000614659 KRTAP19-3Q7Z4W3 81 aa4.97□□□□□ -1.61
SNPH-203ENST00000614659 LPAP08519 4548 aa4.96□□□□□ -1.61
SNPH-203ENST00000614659 KRTAP9-6A0A140TA67 174 aa4.96□□□□□ -1.62
SNPH-203ENST00000614659 KRTAP4-8A0A0G2JLE6 195 aa4.94□□□□□ -1.62
SNPH-203ENST00000614659 KRTAP4-8Q9BYQ9 185 aa4.94□□□□□ -1.62
SNPH-203ENST00000614659 LCE2AQ5TA79 106 aaPredicted RBP4.93□□□□□ -1.62
SNPH-203ENST00000614659 MT1LQ93083 61 aa4.87□□□□□ -1.63
SNPH-203ENST00000614659 MT1EP04732 61 aa4.85□□□□□ -1.63
SNPH-203ENST00000614659 ABCA13Q86UQ4 5058 aa4.79□□□□□ -1.64
SNPH-203ENST00000614659 LCE3DQ9BYE3 92 aa4.79□□□□□ -1.64
SNPH-203ENST00000614659 EPPK1P58107 5090 aaKnown RBP4.76□□□□□ -1.65
SNPH-203ENST00000614659 LCE3EQ5T5B0 92 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms