RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 MYCBP2O75592 4640 aa7.11□□□□□ -1.27
HPS1-215ENST00000613394 XP32Q5T750 250 aa7.11□□□□□ -1.27
HPS1-215ENST00000613394 P0C880 135 aa7.1□□□□□ -1.27
HPS1-215ENST00000613394 KRTAP10-8P60410 259 aa7.1□□□□□ -1.27
HPS1-215ENST00000613394 C10orf95Q9H7T3 257 aa7.09□□□□□ -1.27
HPS1-215ENST00000613394 PKD1P98161 4303 aa7.08□□□□□ -1.28
HPS1-215ENST00000613394 KRTAP10-4P60372 401 aaPredicted RBP7.07□□□□□ -1.28
HPS1-215ENST00000613394 KRTAP13-4Q3LI77 160 aa7.04□□□□□ -1.28
HPS1-215ENST00000613394 LRP1Q07954 4544 aaKnown RBP7□□□□□ -1.29
HPS1-215ENST00000613394 KRTAP10-6P60371 365 aaPredicted RBP6.99□□□□□ -1.29
HPS1-215ENST00000613394 APOBP04114 4563 aaKnown RBP6.98□□□□□ -1.29
HPS1-215ENST00000613394 KRTAP3-3Q9BYR6 98 aa6.95□□□□□ -1.3
HPS1-215ENST00000613394 RYR2Q92736 4967 aa6.95□□□□□ -1.3
HPS1-215ENST00000613394 KIAA1109Q2LD37 5005 aa6.94□□□□□ -1.3
HPS1-215ENST00000613394 M0QZ58 72 aa6.94□□□□□ -1.3
HPS1-215ENST00000613394 R4GN34 69 aa6.92□□□□□ -1.3
HPS1-215ENST00000613394 KRTAP12-2P59991 146 aa6.89□□□□□ -1.31
HPS1-215ENST00000613394 TPRXLQ17RH7 258 aa6.88□□□□□ -1.31
HPS1-215ENST00000613394 KRTAP3-2Q9BYR7 98 aa6.88□□□□□ -1.31
HPS1-215ENST00000613394 RYR3Q15413 4870 aa6.88□□□□□ -1.31
HPS1-215ENST00000613394 J3QL48 77 aa6.87□□□□□ -1.31
HPS1-215ENST00000613394 FAT3Q8TDW7 4589 aa6.84□□□□□ -1.31
HPS1-215ENST00000613394 NDUFAF8A1L188 74 aa6.8□□□□□ -1.32
HPS1-215ENST00000613394 KRTAP17-1Q9BYP8 105 aa6.78□□□□□ -1.32
HPS1-215ENST00000613394 RYR1P21817 5038 aa6.78□□□□□ -1.32
HPS1-215ENST00000613394 KRTAP12-1P59990 96 aa6.77□□□□□ -1.33
HPS1-215ENST00000613394 MT1HL1P0DM35 61 aa6.74□□□□□ -1.33
HPS1-215ENST00000613394 CAMK2N1Q7Z7J9 78 aa6.74□□□□□ -1.33
HPS1-215ENST00000613394 HSPG2P98160 4391 aa6.73□□□□□ -1.33
HPS1-215ENST00000613394 SEC61BP60468 96 aaKnown RBP6.71□□□□□ -1.33
HPS1-215ENST00000613394 KRTAP4-5Q9BYR2 181 aa6.71□□□□□ -1.34
HPS1-215ENST00000613394 EPPK1P58107 5090 aaKnown RBP6.68□□□□□ -1.34
HPS1-215ENST00000613394 LRP2P98164 4655 aa6.66□□□□□ -1.34
HPS1-215ENST00000613394 PKHD1L1Q86WI1 4243 aa6.64□□□□□ -1.35
HPS1-215ENST00000613394 TNXBP22105 4242 aa6.5□□□□□ -1.37
HPS1-215ENST00000613394 LORP23490 312 aaPredicted RBP6.5□□□□□ -1.37
HPS1-215ENST00000613394 LPAP08519 4548 aa6.49□□□□□ -1.37
HPS1-215ENST00000613394 LUZP6Q538Z0 58 aa6.46□□□□□ -1.38
HPS1-215ENST00000613394 KRTAP15-1Q3LI76 137 aa6.45□□□□□ -1.38
HPS1-215ENST00000613394 PLAC4Q8WY50 150 aa6.44□□□□□ -1.38
HPS1-215ENST00000613394 ABCA13Q86UQ4 5058 aa6.42□□□□□ -1.38
HPS1-215ENST00000613394 HERC2O95714 4834 aa6.42□□□□□ -1.38
HPS1-215ENST00000613394 M0R2T5 61 aa6.41□□□□□ -1.38
HPS1-215ENST00000613394 KRTAP4-1Q9BYQ7 146 aa6.35□□□□□ -1.39
HPS1-215ENST00000613394 TNP1P09430 55 aa6.25□□□□□ -1.41
HPS1-215ENST00000613394 MUC2Q02817 5179 aa6.23□□□□□ -1.41
HPS1-215ENST00000613394 PP632Q6XCG6 107 aa6.19□□□□□ -1.42
HPS1-215ENST00000613394 HERC1Q15751 4861 aa6.18□□□□□ -1.42
HPS1-215ENST00000613394 BIRC6Q9NR09 4857 aa6.13□□□□□ -1.43
HPS1-215ENST00000613394 A0A0A0MQY5 61 aa6.13□□□□□ -1.43
HPS1-215ENST00000613394 PCLOQ9Y6V0 5065 aa6.05□□□□□ -1.44
HPS1-215ENST00000613394 KRTAP10-10P60014 251 aa6.03□□□□□ -1.44
HPS1-215ENST00000613394 RNF213Q63HN8 5207 aa6□□□□□ -1.45
HPS1-215ENST00000613394 FAT4Q6V0I7 4981 aa5.95□□□□□ -1.46
HPS1-215ENST00000613394 MUC17Q685J3 4493 aa5.9□□□□□ -1.46
HPS1-215ENST00000613394 UBR4Q5T4S7 5183 aa5.88□□□□□ -1.47
HPS1-215ENST00000613394 KRTAP19-2Q3LHN2 52 aa5.88□□□□□ -1.47
HPS1-215ENST00000613394 HMCN2Q8NDA2 5059 aa5.82□□□□□ -1.48
HPS1-215ENST00000613394 FLGP20930 4061 aaPredicted RBP5.78□□□□□ -1.48
HPS1-215ENST00000613394 LCE3AQ5TA76 89 aa5.78□□□□□ -1.48
HPS1-215ENST00000613394 KRTAP19-1Q8IUB9 90 aa5.69□□□□□ -1.5
HPS1-215ENST00000613394 MT1HP80294 61 aa5.66□□□□□ -1.5
HPS1-215ENST00000613394 SPRR2GQ9BYE4 73 aa5.66□□□□□ -1.5
HPS1-215ENST00000613394 MT1FP04733 61 aa5.65□□□□□ -1.5
HPS1-215ENST00000613394 LCE2CQ5TA81 110 aa5.64□□□□□ -1.51
HPS1-215ENST00000613394 MT2AP02795 61 aa5.63□□□□□ -1.51
HPS1-215ENST00000613394 KRTAP23-1A1A580 65 aa5.62□□□□□ -1.51
HPS1-215ENST00000613394 KRTAP10-12P60413 245 aa5.55□□□□□ -1.52
HPS1-215ENST00000613394 KRTAP12-3P60328 96 aa5.52□□□□□ -1.53
HPS1-215ENST00000613394 PRO2289Q9P1D8 64 aa5.48□□□□□ -1.53
HPS1-215ENST00000613394 KRTAP9-8Q9BYQ0 159 aa5.44□□□□□ -1.54
HPS1-215ENST00000613394 SPRR5A0A1B0GTR4 108 aa5.43□□□□□ -1.54
HPS1-215ENST00000613394 KRTAP8-1Q8IUC2 63 aa5.38□□□□□ -1.55
HPS1-215ENST00000613394 MT1XP80297 61 aa5.38□□□□□ -1.55
HPS1-215ENST00000613394 MT1BP07438 61 aa5.37□□□□□ -1.55
HPS1-215ENST00000613394 KRTAP10-7P60409 375 aaPredicted RBP5.37□□□□□ -1.55
HPS1-215ENST00000613394 KRTAP10-5P60370 271 aa5.37□□□□□ -1.55
HPS1-215ENST00000613394 KRTAP19-8Q3LI54 63 aa5.33□□□□□ -1.56
HPS1-215ENST00000613394 FSIP2Q5CZC0 6907 aa5.32□□□□□ -1.56
HPS1-215ENST00000613394 USH2AO75445 5202 aa5.29□□□□□ -1.56
HPS1-215ENST00000613394 KRTAP19-5Q3LI72 72 aa5.22□□□□□ -1.57
HPS1-215ENST00000613394 KRTAP9-3Q9BYQ3 159 aa5.2□□□□□ -1.58
HPS1-215ENST00000613394 KMT2DO14686 5537 aa5.16□□□□□ -1.58
HPS1-215ENST00000613394 INE1O15225 51 aa5.15□□□□□ -1.58
HPS1-215ENST00000613394 KRTAP4-8A0A0G2JLE6 195 aa5.14□□□□□ -1.59
HPS1-215ENST00000613394 KRTAP4-8Q9BYQ9 185 aa5.14□□□□□ -1.59
HPS1-215ENST00000613394 LCE3CQ5T5A8 94 aa5.07□□□□□ -1.6
HPS1-215ENST00000613394 LCE2BO14633 110 aa5.07□□□□□ -1.6
HPS1-215ENST00000613394 KRTAP4-7Q9BYR0 210 aa4.99□□□□□ -1.61
HPS1-215ENST00000613394 CRCT1Q9UGL9 99 aa4.97□□□□□ -1.61
HPS1-215ENST00000613394 LCE2AQ5TA79 106 aaPredicted RBP4.97□□□□□ -1.61
HPS1-215ENST00000613394 KRTAP9-6A8MVA2 160 aa4.81□□□□□ -1.64
HPS1-215ENST00000613394 KRTAP19-7Q3SYF9 63 aa4.75□□□□□ -1.65
HPS1-215ENST00000613394 SSPOA2VEC9 5147 aa4.74□□□□□ -1.65
HPS1-215ENST00000613394 DSTQ03001 7570 aaKnown RBP4.73□□□□□ -1.65
HPS1-215ENST00000613394 MT1LQ93083 61 aa4.68□□□□□ -1.66
HPS1-215ENST00000613394 FCGBPQ9Y6R7 5405 aaPredicted RBP4.67□□□□□ -1.66
HPS1-215ENST00000613394 MT1EP04732 61 aa4.66□□□□□ -1.66
HPS1-215ENST00000613394 SYNE1Q8NF91 8797 aaKnown RBP4.65□□□□□ -1.66
HPS1-215ENST00000613394 KRTAP4-3Q9BYR4 195 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms