RNA–Protein interactions for RNA: ENST00000608853.5

ATXN2-226, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATXN2, Length 4,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-226ENST00000608853 KRTAP3-3Q9BYR6 98 aa5.86□□□□□ -1.47
ATXN2-226ENST00000608853 DNAH7Q8WXX0 4024 aa5.85□□□□□ -1.47
ATXN2-226ENST00000608853 DNAH3Q8TD57 4116 aa5.82□□□□□ -1.48
ATXN2-226ENST00000608853 FRAS1Q86XX4 4008 aa5.8□□□□□ -1.48
ATXN2-226ENST00000608853 STARD9Q9P2P6 4700 aa5.8□□□□□ -1.48
ATXN2-226ENST00000608853 DNAH8Q96JB1 4490 aa5.78□□□□□ -1.48
ATXN2-226ENST00000608853 FAT1Q14517 4588 aa5.75□□□□□ -1.49
ATXN2-226ENST00000608853 KMT2AQ03164 3969 aa5.75□□□□□ -1.49
ATXN2-226ENST00000608853 PRKDCP78527 4128 aaKnown RBP5.74□□□□□ -1.49
ATXN2-226ENST00000608853 DNAH5Q8TE73 4624 aa5.72□□□□□ -1.49
ATXN2-226ENST00000608853 LRP1BQ9NZR2 4599 aa5.71□□□□□ -1.49
ATXN2-226ENST00000608853 PRO2289Q9P1D8 64 aa5.71□□□□□ -1.5
ATXN2-226ENST00000608853 VPS13DQ5THJ4 4388 aa5.69□□□□□ -1.5
ATXN2-226ENST00000608853 DNAH17Q9UFH2 4485 aa5.69□□□□□ -1.5
ATXN2-226ENST00000608853 KRTAP10-4P60372 401 aaPredicted RBP5.66□□□□□ -1.5
ATXN2-226ENST00000608853 HECTD4Q9Y4D8 3996 aa5.66□□□□□ -1.5
ATXN2-226ENST00000608853 MYCBP2O75592 4640 aa5.65□□□□□ -1.51
ATXN2-226ENST00000608853 MT1HL1P0DM35 61 aa5.64□□□□□ -1.51
ATXN2-226ENST00000608853 DNAH2Q9P225 4427 aa5.62□□□□□ -1.51
ATXN2-226ENST00000608853 DNAH6Q9C0G6 4158 aa5.61□□□□□ -1.51
ATXN2-226ENST00000608853 RYR3Q15413 4870 aa5.61□□□□□ -1.51
ATXN2-226ENST00000608853 DYNC2H1Q8NCM8 4307 aaKnown RBP5.56□□□□□ -1.52
ATXN2-226ENST00000608853 ALMS1Q8TCU4 4167 aa5.56□□□□□ -1.52
ATXN2-226ENST00000608853 KMT2CQ8NEZ4 4911 aaKnown RBP5.56□□□□□ -1.52
ATXN2-226ENST00000608853 DYNC1H1Q14204 4646 aaKnown RBP5.5□□□□□ -1.53
ATXN2-226ENST00000608853 VPS13BQ7Z7G8 4022 aa5.49□□□□□ -1.53
ATXN2-226ENST00000608853 FAT3Q8TDW7 4589 aa5.48□□□□□ -1.53
ATXN2-226ENST00000608853 BIRC6Q9NR09 4857 aa5.47□□□□□ -1.53
ATXN2-226ENST00000608853 RYR2Q92736 4967 aa5.45□□□□□ -1.54
ATXN2-226ENST00000608853 KRTAP4-5Q9BYR2 181 aa5.45□□□□□ -1.54
ATXN2-226ENST00000608853 KIAA1109Q2LD37 5005 aa5.42□□□□□ -1.54
ATXN2-226ENST00000608853 LRP1Q07954 4544 aaKnown RBP5.42□□□□□ -1.54
ATXN2-226ENST00000608853 INE1O15225 51 aa5.42□□□□□ -1.54
ATXN2-226ENST00000608853 LORP23490 312 aaPredicted RBP5.42□□□□□ -1.54
ATXN2-226ENST00000608853 RYR1P21817 5038 aa5.42□□□□□ -1.54
ATXN2-226ENST00000608853 HYDINQ4G0P3 5121 aa5.4□□□□□ -1.55
ATXN2-226ENST00000608853 SACSQ9NZJ4 4579 aa5.38□□□□□ -1.55
ATXN2-226ENST00000608853 EPPK1P58107 5090 aaKnown RBP5.38□□□□□ -1.55
ATXN2-226ENST00000608853 KRTAP23-1A1A580 65 aa5.37□□□□□ -1.55
ATXN2-226ENST00000608853 PKHD1P08F94 4074 aa5.33□□□□□ -1.56
ATXN2-226ENST00000608853 KRTAP17-1Q9BYP8 105 aa5.32□□□□□ -1.56
ATXN2-226ENST00000608853 KRTAP10-12P60413 245 aa5.3□□□□□ -1.56
ATXN2-226ENST00000608853 APOBP04114 4563 aaKnown RBP5.29□□□□□ -1.56
ATXN2-226ENST00000608853 HERC2O95714 4834 aa5.26□□□□□ -1.57
ATXN2-226ENST00000608853 FAT2Q9NYQ8 4349 aa5.26□□□□□ -1.57
ATXN2-226ENST00000608853 PKD1P98161 4303 aa5.26□□□□□ -1.57
ATXN2-226ENST00000608853 KRTAP12-3P60328 96 aa5.25□□□□□ -1.57
ATXN2-226ENST00000608853 LCE3AQ5TA76 89 aa5.25□□□□□ -1.57
ATXN2-226ENST00000608853 LRP2P98164 4655 aa5.18□□□□□ -1.58
ATXN2-226ENST00000608853 PCLOQ9Y6V0 5065 aa5.12□□□□□ -1.59
ATXN2-226ENST00000608853 KRTAP4-1Q9BYQ7 146 aa5.1□□□□□ -1.59
ATXN2-226ENST00000608853 HSPG2P98160 4391 aa5.02□□□□□ -1.61
ATXN2-226ENST00000608853 LPAP08519 4548 aa4.99□□□□□ -1.61
ATXN2-226ENST00000608853 PKHD1L1Q86WI1 4243 aa4.96□□□□□ -1.62
ATXN2-226ENST00000608853 CRCT1Q9UGL9 99 aa4.94□□□□□ -1.62
ATXN2-226ENST00000608853 ABCA13Q86UQ4 5058 aa4.93□□□□□ -1.62
ATXN2-226ENST00000608853 SPRR2GQ9BYE4 73 aa4.93□□□□□ -1.62
ATXN2-226ENST00000608853 TNXBP22105 4242 aa4.86□□□□□ -1.63
ATXN2-226ENST00000608853 MT2AP02795 61 aa4.83□□□□□ -1.64
ATXN2-226ENST00000608853 MUC2Q02817 5179 aa4.83□□□□□ -1.64
ATXN2-226ENST00000608853 KRTAP8-1Q8IUC2 63 aa4.83□□□□□ -1.64
ATXN2-226ENST00000608853 MT1HP80294 61 aa4.81□□□□□ -1.64
ATXN2-226ENST00000608853 MT1FP04733 61 aa4.76□□□□□ -1.65
ATXN2-226ENST00000608853 KRTAP10-5P60370 271 aa4.74□□□□□ -1.65
ATXN2-226ENST00000608853 HERC1Q15751 4861 aa4.7□□□□□ -1.66
ATXN2-226ENST00000608853 KRTAP19-1Q8IUB9 90 aa4.69□□□□□ -1.66
ATXN2-226ENST00000608853 RNF213Q63HN8 5207 aa4.69□□□□□ -1.66
ATXN2-226ENST00000608853 SPRR5A0A1B0GTR4 108 aa4.67□□□□□ -1.66
ATXN2-226ENST00000608853 KRTAP19-5Q3LI72 72 aa4.67□□□□□ -1.66
ATXN2-226ENST00000608853 FAT4Q6V0I7 4981 aa4.66□□□□□ -1.66
ATXN2-226ENST00000608853 LCE3CQ5T5A8 94 aa4.65□□□□□ -1.66
ATXN2-226ENST00000608853 FSIP2Q5CZC0 6907 aa4.6□□□□□ -1.67
ATXN2-226ENST00000608853 KRTAP19-8Q3LI54 63 aa4.58□□□□□ -1.68
ATXN2-226ENST00000608853 HMCN2Q8NDA2 5059 aa4.57□□□□□ -1.68
ATXN2-226ENST00000608853 KRTAP10-7P60409 375 aaPredicted RBP4.55□□□□□ -1.68
ATXN2-226ENST00000608853 MT1XP80297 61 aa4.51□□□□□ -1.69
ATXN2-226ENST00000608853 UBR4Q5T4S7 5183 aa4.5□□□□□ -1.69
ATXN2-226ENST00000608853 KRTAP19-4Q3LI73 84 aa4.47□□□□□ -1.69
ATXN2-226ENST00000608853 MT1BP07438 61 aa4.45□□□□□ -1.7
ATXN2-226ENST00000608853 MUC17Q685J3 4493 aa4.42□□□□□ -1.7
ATXN2-226ENST00000608853 LCE2CQ5TA81 110 aa4.39□□□□□ -1.71
ATXN2-226ENST00000608853 KRTAP19-2Q3LHN2 52 aa4.39□□□□□ -1.71
ATXN2-226ENST00000608853 KRTAP9-8Q9BYQ0 159 aa4.39□□□□□ -1.71
ATXN2-226ENST00000608853 OBSCNQ5VST9 7968 aa4.37□□□□□ -1.71
ATXN2-226ENST00000608853 FLGP20930 4061 aaPredicted RBP4.32□□□□□ -1.72
ATXN2-226ENST00000608853 SPRR2FQ96RM1 72 aa4.29□□□□□ -1.72
ATXN2-226ENST00000608853 KRTAP4-8A0A0G2JLE6 195 aa4.28□□□□□ -1.72
ATXN2-226ENST00000608853 KRTAP4-8Q9BYQ9 185 aa4.28□□□□□ -1.72
ATXN2-226ENST00000608853 KRTAP12-4P60329 112 aa4.27□□□□□ -1.73
ATXN2-226ENST00000608853 KRTAP9-3Q9BYQ3 159 aa4.25□□□□□ -1.73
ATXN2-226ENST00000608853 USH2AO75445 5202 aa4.21□□□□□ -1.73
ATXN2-226ENST00000608853 SYNE1Q8NF91 8797 aaKnown RBP4.21□□□□□ -1.74
ATXN2-226ENST00000608853 MT1GP13640 62 aa4.19□□□□□ -1.74
ATXN2-226ENST00000608853 KRTAP9-2Q9BYQ4 174 aa4.19□□□□□ -1.74
ATXN2-226ENST00000608853 LCE3BQ5TA77 95 aa4.17□□□□□ -1.74
ATXN2-226ENST00000608853 KRTAP9-6A0A140TA67 174 aa4.16□□□□□ -1.74
ATXN2-226ENST00000608853 KRTAP4-7Q9BYR0 210 aa4.12□□□□□ -1.75
ATXN2-226ENST00000608853 LCE2AQ5TA79 106 aaPredicted RBP4.12□□□□□ -1.75
ATXN2-226ENST00000608853 KMT2DO14686 5537 aa4.11□□□□□ -1.75
ATXN2-226ENST00000608853 DSTQ03001 7570 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms