RNA–Protein interactions for RNA: ENST00000606347.1

UCHL3-204, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

TSL 2

Gene UCHL3, Length 722 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-204ENST00000606347 TEP1Q99973 2627 aaKnown RBP0.16□□□□□ -2.38
UCHL3-204ENST00000606347 DEFB108AA8MXU0 73 aa0.16□□□□□ -2.38
UCHL3-204ENST00000606347 KRTAP19-5Q3LI72 72 aa0.16□□□□□ -2.38
UCHL3-204ENST00000606347 RPL39P5Q59GN2 51 aa0.16□□□□□ -2.38
UCHL3-204ENST00000606347 FLGP20930 4061 aaPredicted RBP0.16□□□□□ -2.38
UCHL3-204ENST00000606347 VPS13DQ5THJ4 4388 aa0.16□□□□□ -2.38
UCHL3-204ENST00000606347 ANKRD11Q6UB99 2663 aaPredicted RBP0.15□□□□□ -2.39
UCHL3-204ENST00000606347 RANBP2P49792 3224 aaKnown RBP0.15□□□□□ -2.39
UCHL3-204ENST00000606347 SPRR2EP22531 72 aa0.15□□□□□ -2.39
UCHL3-204ENST00000606347 DEFB136Q30KP8 78 aa0.15□□□□□ -2.39
UCHL3-204ENST00000606347 SPRR2FQ96RM1 72 aa0.15□□□□□ -2.39
UCHL3-204ENST00000606347 CELSR3Q9NYQ7 3312 aa0.15□□□□□ -2.39
UCHL3-204ENST00000606347 DEFB1P60022 68 aa0.14□□□□□ -2.39
UCHL3-204ENST00000606347 TMEM167AQ8TBQ9 72 aa0.14□□□□□ -2.39
UCHL3-204ENST00000606347 ZANQ9Y493 2812 aa0.14□□□□□ -2.39
UCHL3-204ENST00000606347 ANK3Q12955 4377 aaKnown RBP0.14□□□□□ -2.39
UCHL3-204ENST00000606347 TLN2Q9Y4G6 2542 aa0.14□□□□□ -2.39
UCHL3-204ENST00000606347 PKHD1P08F94 4074 aa0.13□□□□□ -2.39
UCHL3-204ENST00000606347 DNAH9Q9NYC9 4486 aa0.13□□□□□ -2.39
UCHL3-204ENST00000606347 KALRNO60229 2985 aa0.13□□□□□ -2.39
UCHL3-204ENST00000606347 CRYBG3Q68DQ2 2970 aa0.13□□□□□ -2.39
UCHL3-204ENST00000606347 FLNAP21333 2647 aaKnown RBP0.13□□□□□ -2.39
UCHL3-204ENST00000606347 RHPN1-AS1Q9BWJ2 59 aa0.13□□□□□ -2.39
UCHL3-204ENST00000606347 AKAP9Q99996 3911 aa0.13□□□□□ -2.39
UCHL3-204ENST00000606347 USP9XQ93008 2570 aaPredicted RBP0.13□□□□□ -2.39
UCHL3-204ENST00000606347 TRIOO75962 3097 aa0.13□□□□□ -2.39
UCHL3-204ENST00000606347 LAMA1P25391 3075 aa0.13□□□□□ -2.39
UCHL3-204ENST00000606347 FSIP2Q5CZC0 6907 aa0.13□□□□□ -2.39
UCHL3-204ENST00000606347 MGAM2Q2M2H8 2515 aa0.13□□□□□ -2.39
UCHL3-204ENST00000606347 SPTBN5Q9NRC6 3674 aaKnown RBP0.12□□□□□ -2.39
UCHL3-204ENST00000606347 ZFHX4Q86UP3 3567 aa0.12□□□□□ -2.39
UCHL3-204ENST00000606347 APOBP04114 4563 aaKnown RBP0.12□□□□□ -2.39
UCHL3-204ENST00000606347 FAT3Q8TDW7 4589 aa0.12□□□□□ -2.39
UCHL3-204ENST00000606347 NBEAQ8NFP9 2946 aa0.12□□□□□ -2.39
UCHL3-204ENST00000606347 APELAP0DMC3 54 aa0.12□□□□□ -2.39
UCHL3-204ENST00000606347 HTN1P15515 57 aa0.12□□□□□ -2.39
UCHL3-204ENST00000606347 USP9YO00507 2555 aaPredicted RBP0.12□□□□□ -2.39
UCHL3-204ENST00000606347 DNAH6Q9C0G6 4158 aa0.12□□□□□ -2.39
UCHL3-204ENST00000606347 LAMA5O15230 3695 aa0.11□□□□□ -2.39
UCHL3-204ENST00000606347 FRYQ5TBA9 3013 aa0.11□□□□□ -2.39
UCHL3-204ENST00000606347 DNAH2Q9P225 4427 aa0.11□□□□□ -2.39
UCHL3-204ENST00000606347 SPRR2GQ9BYE4 73 aa0.11□□□□□ -2.39
UCHL3-204ENST00000606347 DOPEY1Q5JWR5 2465 aa0.11□□□□□ -2.39
UCHL3-204ENST00000606347 NBPF19A0A087WUL8 3843 aa0.11□□□□□ -2.39
UCHL3-204ENST00000606347 LRP2P98164 4655 aa0.11□□□□□ -2.39
UCHL3-204ENST00000606347 DYNC2H1Q8NCM8 4307 aaKnown RBP0.11□□□□□ -2.39
UCHL3-204ENST00000606347 HIVEP1P15822 2718 aa0.1□□□□□ -2.39
UCHL3-204ENST00000606347 FAT1Q14517 4588 aa0.1□□□□□ -2.39
UCHL3-204ENST00000606347 SPTAN1Q13813 2472 aaKnown RBP0.09□□□□□ -2.39
UCHL3-204ENST00000606347 TGP01266 2768 aa0.09□□□□□ -2.39
UCHL3-204ENST00000606347 ADGRG4Q8IZF6 3080 aa0.09□□□□□ -2.39
UCHL3-204ENST00000606347 DNAH8Q96JB1 4490 aa0.09□□□□□ -2.39
UCHL3-204ENST00000606347 HTTP42858 3142 aa0.09□□□□□ -2.4
UCHL3-204ENST00000606347 DNAH7Q8WXX0 4024 aa0.09□□□□□ -2.4
UCHL3-204ENST00000606347 ITPR3Q14573 2671 aa0.08□□□□□ -2.4
UCHL3-204ENST00000606347 NBEAL1Q6ZS30 2694 aa0.08□□□□□ -2.4
UCHL3-204ENST00000606347 CEP250Q9BV73 2442 aa0.07□□□□□ -2.4
UCHL3-204ENST00000606347 WDR87Q6ZQQ6 2873 aa0.07□□□□□ -2.4
UCHL3-204ENST00000606347 H3BUX3 64 aa0.06□□□□□ -2.4
UCHL3-204ENST00000606347 DEFB4AO15263 64 aa0.06□□□□□ -2.4
UCHL3-204ENST00000606347 DEFB133Q30KQ1 61 aa0.06□□□□□ -2.4
UCHL3-204ENST00000606347 KRTAP19-7Q3SYF9 63 aa0.06□□□□□ -2.4
UCHL3-204ENST00000606347 STAB2Q8WWQ8 2551 aa0.06□□□□□ -2.4
UCHL3-204ENST00000606347 MGAQ8IWI9 3026 aa0.06□□□□□ -2.4
UCHL3-204ENST00000606347 RELNP78509 3460 aa0.06□□□□□ -2.4
UCHL3-204ENST00000606347 MXRA5Q9NR99 2828 aa0.06□□□□□ -2.4
UCHL3-204ENST00000606347 CSMD1Q96PZ7 3565 aa0.06□□□□□ -2.4
UCHL3-204ENST00000606347 DNAH1Q9P2D7 4330 aa0.06□□□□□ -2.4
UCHL3-204ENST00000606347 KRTAP19-8Q3LI54 63 aa0.05□□□□□ -2.4
UCHL3-204ENST00000606347 DMXL2Q8TDJ6 3036 aa0.05□□□□□ -2.4
UCHL3-204ENST00000606347 ITPR1Q14643 2758 aa0.05□□□□□ -2.4
UCHL3-204ENST00000606347 CFAP54Q96N23 3096 aa0.05□□□□□ -2.4
UCHL3-204ENST00000606347 A0A096LPF7 62 aa0.04□□□□□ -2.4
UCHL3-204ENST00000606347 MT1HP80294 61 aa0.04□□□□□ -2.4
UCHL3-204ENST00000606347 MT1EP04732 61 aa0.03□□□□□ -2.4
UCHL3-204ENST00000606347 DEFB124Q8NES8 71 aa0.03□□□□□ -2.4
UCHL3-204ENST00000606347 DNAH10Q8IVF4 4471 aa0.03□□□□□ -2.4
UCHL3-204ENST00000606347 CFAP46Q8IYW2 2715 aa0.03□□□□□ -2.4
UCHL3-204ENST00000606347 SRCAPQ6ZRS2 3230 aa0.03□□□□□ -2.41
UCHL3-204ENST00000606347 LAMA3Q16787 3333 aa0.02□□□□□ -2.41
UCHL3-204ENST00000606347 C5orf42Q9H799 3197 aa0.02□□□□□ -2.41
UCHL3-204ENST00000606347 TEX15Q9BXT5 2789 aa0.01□□□□□ -2.41
UCHL3-204ENST00000606347 SSPOA2VEC9 5147 aa0.01□□□□□ -2.41
UCHL3-204ENST00000606347 HERC1Q15751 4861 aa0.01□□□□□ -2.41
UCHL3-204ENST00000606347 MT1LQ93083 61 aa0.01□□□□□ -2.41
UCHL3-204ENST00000606347 PLECQ15149 4684 aaKnown RBP0.01□□□□□ -2.41
UCHL3-204ENST00000606347 MACF1Q9UPN3 7388 aaKnown RBP0.01□□□□□ -2.41
UCHL3-204ENST00000606347 LAMA2P24043 3122 aaKnown RBP0□□□□□ -2.41
UCHL3-204ENST00000606347 MT1GP13640 62 aa0□□□□□ -2.41
UCHL3-204ENST00000606347 MT1XP80297 61 aa0□□□□□ -2.41
UCHL3-204ENST00000606347 ATMQ13315 3056 aa0□□□□□ -2.41
UCHL3-204ENST00000606347 TLN1Q9Y490 2541 aaKnown RBP-0.01□□□□□ -2.41
UCHL3-204ENST00000606347 STATHP02808 62 aa-0.01□□□□□ -2.41
UCHL3-204ENST00000606347 LINC01556Q5JQF7 62 aa-0.01□□□□□ -2.41
UCHL3-204ENST00000606347 STARD9Q9P2P6 4700 aa-0.01□□□□□ -2.41
UCHL3-204ENST00000606347 DNAH17Q9UFH2 4485 aa-0.01□□□□□ -2.41
UCHL3-204ENST00000606347 MUC2Q02817 5179 aa-0.02□□□□□ -2.41
UCHL3-204ENST00000606347 KRTAP20-2Q3LI61 65 aa-0.02□□□□□ -2.41
UCHL3-204ENST00000606347 KRTAP6-1Q3LI64 71 aa-0.02□□□□□ -2.41
UCHL3-204ENST00000606347 CMYA5Q8N3K9 4069 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms