RNA–Protein interactions for RNA: ENST00000606347.1

UCHL3-204, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

TSL 2

Gene UCHL3, Length 722 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-204ENST00000606347 AEBP2Q6ZN18 517 aaPredicted RBP30.29■■■□□ 2.44
UCHL3-204ENST00000606347 CHIC1Q5VXU3 224 aa28.29■■■□□ 2.12
UCHL3-204ENST00000606347 SENP3Q9H4L4 574 aaPredicted RBP25.91■■□□□ 1.74
UCHL3-204ENST00000606347 PHF23Q9BUL5 403 aaPredicted RBP25.52■■□□□ 1.68
UCHL3-204ENST00000606347 FOXD1Q16676 465 aa24.25■■□□□ 1.47
UCHL3-204ENST00000606347 POTEDQ86YR6 584 aa23.41■■□□□ 1.34
UCHL3-204ENST00000606347 MSH5O43196 834 aa22.89■■□□□ 1.25
UCHL3-204ENST00000606347 PIAS4Q8N2W9 510 aaPredicted RBP22.54■■□□□ 1.2
UCHL3-204ENST00000606347 PLPPR3Q6T4P5 718 aa22.23■■□□□ 1.15
UCHL3-204ENST00000606347 PPP6R1Q9UPN7 881 aa22.22■■□□□ 1.15
UCHL3-204ENST00000606347 ADRA2BP18089 450 aa22.14■■□□□ 1.13
UCHL3-204ENST00000606347 MAPK8IP2Q13387 824 aaPredicted RBP20.53■□□□□ 0.88
UCHL3-204ENST00000606347 DMRT2Q9Y5R5 561 aa20.45■□□□□ 0.86
UCHL3-204ENST00000606347 SCAF1Q9H7N4 1312 aaKnown RBP20.22■□□□□ 0.83
UCHL3-204ENST00000606347 CACNB1Q02641 598 aaPredicted RBP20.08■□□□□ 0.81
UCHL3-204ENST00000606347 DCAF8L1A6NGE4 600 aa19.78■□□□□ 0.76
UCHL3-204ENST00000606347 RNF39Q9H2S5 420 aa19.47■□□□□ 0.71
UCHL3-204ENST00000606347 HOXD11P31277 338 aaPredicted RBP19.43■□□□□ 0.7
UCHL3-204ENST00000606347 PPP4R3CPQ6ZMV5 832 aa19.43■□□□□ 0.7
UCHL3-204ENST00000606347 CNKSR2Q8WXI2 1034 aa19.17■□□□□ 0.66
UCHL3-204ENST00000606347 C1QBPQ07021 282 aaKnown RBP19.15■□□□□ 0.66
UCHL3-204ENST00000606347 RNF216Q9NWF9 866 aaPredicted RBP19.14■□□□□ 0.65
UCHL3-204ENST00000606347 DNAJC5BQ9UF47 199 aa18.8■□□□□ 0.6
UCHL3-204ENST00000606347 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.61■□□□□ 0.57
UCHL3-204ENST00000606347 NCBP3Q53F19 620 aaKnown RBP18.49■□□□□ 0.55
UCHL3-204ENST00000606347 NPM3O75607 178 aaKnown RBP18.23■□□□□ 0.51
UCHL3-204ENST00000606347 POTEHQ6S545 545 aa18.23■□□□□ 0.51
UCHL3-204ENST00000606347 U3KPZ7 1027 aaPredicted RBP18.11■□□□□ 0.49
UCHL3-204ENST00000606347 CAPN15O75808 1086 aa18.09■□□□□ 0.49
UCHL3-204ENST00000606347 DSG3P32926 999 aa18.06■□□□□ 0.48
UCHL3-204ENST00000606347 SPINK5Q9NQ38 1064 aaPredicted RBP18.06■□□□□ 0.48
UCHL3-204ENST00000606347 TRHP20396 242 aaPredicted RBP17.67■□□□□ 0.42
UCHL3-204ENST00000606347 ABCB7O75027 752 aa17.63■□□□□ 0.41
UCHL3-204ENST00000606347 SLC4A2P04920 1241 aa17.56■□□□□ 0.4
UCHL3-204ENST00000606347 ZNF219Q9P2Y4 722 aaPredicted RBP17.53■□□□□ 0.4
UCHL3-204ENST00000606347 APLP2Q06481 763 aa17.52■□□□□ 0.4
UCHL3-204ENST00000606347 KCNA4P22459 653 aa17.37■□□□□ 0.37
UCHL3-204ENST00000606347 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.36■□□□□ 0.37
UCHL3-204ENST00000606347 HNRNPUL2Q1KMD3 747 aaKnown RBP17.36■□□□□ 0.37
UCHL3-204ENST00000606347 SAMD1Q6SPF0 538 aaPredicted RBP17.24■□□□□ 0.35
UCHL3-204ENST00000606347 RBM42Q9BTD8 480 aaKnown RBP17.24■□□□□ 0.35
UCHL3-204ENST00000606347 CHRDL2Q6WN34 429 aa17.12■□□□□ 0.33
UCHL3-204ENST00000606347 POLA2Q14181 598 aa17.01■□□□□ 0.31
UCHL3-204ENST00000606347 MYCNP04198 464 aaPredicted RBP16.87■□□□□ 0.29
UCHL3-204ENST00000606347 SP7Q8TDD2 431 aaPredicted RBP16.8■□□□□ 0.28
UCHL3-204ENST00000606347 AKT1S1Q96B36 256 aa16.71■□□□□ 0.27
UCHL3-204ENST00000606347 PIP4P2Q8N4L2 257 aa16.59■□□□□ 0.25
UCHL3-204ENST00000606347 REM2Q8IYK8 340 aaPredicted RBP16.58■□□□□ 0.24
UCHL3-204ENST00000606347 ZBTB12Q9Y330 459 aaPredicted RBP16.57■□□□□ 0.24
UCHL3-204ENST00000606347 ATF5Q9Y2D1 282 aaPredicted RBP16.56■□□□□ 0.24
UCHL3-204ENST00000606347 OSCARQ8IYS5 282 aa16.51■□□□□ 0.23
UCHL3-204ENST00000606347 HAX1O00165 279 aa16.5■□□□□ 0.23
UCHL3-204ENST00000606347 PITPNM1O00562 1244 aa16.42■□□□□ 0.22
UCHL3-204ENST00000606347 FOXD4L1Q9NU39 408 aa16.37■□□□□ 0.21
UCHL3-204ENST00000606347 FXR2P51116 673 aaKnown RBP eCLIP16.35■□□□□ 0.21
UCHL3-204ENST00000606347 SLC4A1APQ9BWU0 796 aaKnown RBP16.28■□□□□ 0.2
UCHL3-204ENST00000606347 EVX2Q03828 476 aa16.22■□□□□ 0.19
UCHL3-204ENST00000606347 SPDYE2BA6NHP3 402 aa16.01■□□□□ 0.15
UCHL3-204ENST00000606347 SPDYE6P0CI01 402 aa16.01■□□□□ 0.15
UCHL3-204ENST00000606347 PRKAR2AP13861 404 aaKnown RBP16.01■□□□□ 0.15
UCHL3-204ENST00000606347 SPDYE2Q495Y8 402 aa16.01■□□□□ 0.15
UCHL3-204ENST00000606347 CLEC11AQ9Y240 323 aa15.99■□□□□ 0.15
UCHL3-204ENST00000606347 FBLN2P98095 1184 aa15.95■□□□□ 0.14
UCHL3-204ENST00000606347 ZBTB22O15209 634 aa15.94■□□□□ 0.14
UCHL3-204ENST00000606347 SPDYE1Q8NFV5 336 aaPredicted RBP15.9■□□□□ 0.14
UCHL3-204ENST00000606347 C19orf67A6NJJ6 358 aa15.86■□□□□ 0.13
UCHL3-204ENST00000606347 ATXN8OSP0DMR3 200 aa15.86■□□□□ 0.13
UCHL3-204ENST00000606347 GABBR2O75899 941 aa15.81■□□□□ 0.12
UCHL3-204ENST00000606347 ZNF692Q9BU19 519 aaPredicted RBP15.77■□□□□ 0.12
UCHL3-204ENST00000606347 LHX8Q68G74 356 aa15.76■□□□□ 0.11
UCHL3-204ENST00000606347 MKRN4PQ13434 485 aaPredicted RBP15.74■□□□□ 0.11
UCHL3-204ENST00000606347 CHADLQ6NUI6 762 aa15.73■□□□□ 0.11
UCHL3-204ENST00000606347 SSUH2Q9Y2M2 353 aa15.72■□□□□ 0.11
UCHL3-204ENST00000606347 PRR29P0C7W0 189 aa15.59■□□□□ 0.09
UCHL3-204ENST00000606347 PABPN1Q86U42 306 aaKnown RBP eCLIP15.53■□□□□ 0.08
UCHL3-204ENST00000606347 CD44P16070 742 aaKnown RBP15.47■□□□□ 0.07
UCHL3-204ENST00000606347 POTEIP0CG38 1075 aa15.46■□□□□ 0.07
UCHL3-204ENST00000606347 FARP1Q9Y4F1 1045 aaPredicted RBP15.38■□□□□ 0.05
UCHL3-204ENST00000606347 PLSCR2Q9NRY7 297 aa15.34■□□□□ 0.05
UCHL3-204ENST00000606347 DCBLD2Q96PD2 775 aa15.29■□□□□ 0.04
UCHL3-204ENST00000606347 CLCN6P51797 869 aa15.25■□□□□ 0.03
UCHL3-204ENST00000606347 ZRANB1Q9UGI0 708 aa15.17■□□□□ 0.02
UCHL3-204ENST00000606347 ZNF579Q8NAF0 562 aaKnown RBP15.15■□□□□ 0.02
UCHL3-204ENST00000606347 GALR2O43603 387 aaPredicted RBP15.06■□□□□ 0
UCHL3-204ENST00000606347 CREBZFQ9NS37 354 aa15.03■□□□□ -0
UCHL3-204ENST00000606347 OTUD5Q96G74 571 aa15.01□□□□□ -0.01
UCHL3-204ENST00000606347 POTEB2H3BUK9 544 aa14.96□□□□□ -0.01
UCHL3-204ENST00000606347 STAG3Q9UJ98 1225 aa14.92□□□□□ -0.02
UCHL3-204ENST00000606347 PHF12Q96QT6 1004 aa14.91□□□□□ -0.02
UCHL3-204ENST00000606347 PAK3O75914 559 aaPredicted RBP14.9□□□□□ -0.02
UCHL3-204ENST00000606347 POTEMA6NI47 508 aa14.89□□□□□ -0.03
UCHL3-204ENST00000606347 POTEGQ6S5H5 508 aa14.83□□□□□ -0.04
UCHL3-204ENST00000606347 PELP1Q8IZL8 1130 aaKnown RBP14.81□□□□□ -0.04
UCHL3-204ENST00000606347 NPM1P06748 294 aaKnown RBP eCLIP14.74□□□□□ -0.05
UCHL3-204ENST00000606347 SPDYE4A6NLX3 237 aa14.71□□□□□ -0.05
UCHL3-204ENST00000606347 METRNQ9UJH8 293 aa14.7□□□□□ -0.06
UCHL3-204ENST00000606347 MS4A3Q96HJ5 214 aa14.68□□□□□ -0.06
UCHL3-204ENST00000606347 CSRNP3Q8WYN3 585 aa14.67□□□□□ -0.06
UCHL3-204ENST00000606347 MNX1P50219 401 aaPredicted RBP14.66□□□□□ -0.06
UCHL3-204ENST00000606347 ASTLQ6HA08 431 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms