RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-223ENST00000604624 ANK2Q01484 3957 aa2.1□□□□□ -2.07
KCNMA1-223ENST00000604624 KRTAP15-1Q3LI76 137 aa2.09□□□□□ -2.07
KCNMA1-223ENST00000604624 XP32Q5T750 250 aa2.09□□□□□ -2.07
KCNMA1-223ENST00000604624 DYNC1H1Q14204 4646 aaKnown RBP2.08□□□□□ -2.08
KCNMA1-223ENST00000604624 KRTAP7-1Q8IUC3 87 aa2.08□□□□□ -2.08
KCNMA1-223ENST00000604624 ZNF469Q96JG9 3925 aaPredicted RBP2.07□□□□□ -2.08
KCNMA1-223ENST00000604624 DNAH10Q8IVF4 4471 aa2.06□□□□□ -2.08
KCNMA1-223ENST00000604624 SACSQ9NZJ4 4579 aa2.05□□□□□ -2.08
KCNMA1-223ENST00000604624 DNAH9Q9NYC9 4486 aa2.05□□□□□ -2.08
KCNMA1-223ENST00000604624 DNAH17Q9UFH2 4485 aa2.05□□□□□ -2.08
KCNMA1-223ENST00000604624 INE1O15225 51 aa2.04□□□□□ -2.08
KCNMA1-223ENST00000604624 DNAH5Q8TE73 4624 aa2.04□□□□□ -2.08
KCNMA1-223ENST00000604624 KRTAP13-4Q3LI77 160 aa2.03□□□□□ -2.08
KCNMA1-223ENST00000604624 LRP1BQ9NZR2 4599 aa2.03□□□□□ -2.08
KCNMA1-223ENST00000604624 KRTAP10-4P60372 401 aaPredicted RBP2.03□□□□□ -2.09
KCNMA1-223ENST00000604624 STARD9Q9P2P6 4700 aa2.02□□□□□ -2.09
KCNMA1-223ENST00000604624 DNAH7Q8WXX0 4024 aa2.02□□□□□ -2.09
KCNMA1-223ENST00000604624 TPRXLQ17RH7 258 aa2.02□□□□□ -2.09
KCNMA1-223ENST00000604624 DYNC2H1Q8NCM8 4307 aaKnown RBP2.01□□□□□ -2.09
KCNMA1-223ENST00000604624 VPS13DQ5THJ4 4388 aa2.01□□□□□ -2.09
KCNMA1-223ENST00000604624 DNAH1Q9P2D7 4330 aa2.01□□□□□ -2.09
KCNMA1-223ENST00000604624 HUWE1Q7Z6Z7 4374 aaKnown RBP2.01□□□□□ -2.09
KCNMA1-223ENST00000604624 UBR4Q5T4S7 5183 aa2□□□□□ -2.09
KCNMA1-223ENST00000604624 KRTAP10-6P60371 365 aaPredicted RBP2□□□□□ -2.09
KCNMA1-223ENST00000604624 KRTAP23-1A1A580 65 aa1.99□□□□□ -2.09
KCNMA1-223ENST00000604624 DNAH6Q9C0G6 4158 aa1.98□□□□□ -2.09
KCNMA1-223ENST00000604624 KRTAP1-4P0C5Y4 121 aa1.98□□□□□ -2.09
KCNMA1-223ENST00000604624 FAT1Q14517 4588 aa1.96□□□□□ -2.1
KCNMA1-223ENST00000604624 KRTAP12-1P59990 96 aa1.96□□□□□ -2.1
KCNMA1-223ENST00000604624 DNAH8Q96JB1 4490 aa1.95□□□□□ -2.1
KCNMA1-223ENST00000604624 PRKDCP78527 4128 aaKnown RBP1.95□□□□□ -2.1
KCNMA1-223ENST00000604624 FAT2Q9NYQ8 4349 aa1.95□□□□□ -2.1
KCNMA1-223ENST00000604624 DNAH2Q9P225 4427 aa1.94□□□□□ -2.1
KCNMA1-223ENST00000604624 KRTAP10-5P60370 271 aa1.94□□□□□ -2.1
KCNMA1-223ENST00000604624 KRTAP10-7P60409 375 aaPredicted RBP1.94□□□□□ -2.1
KCNMA1-223ENST00000604624 KRTAP13-3Q3SY46 172 aa1.93□□□□□ -2.1
KCNMA1-223ENST00000604624 APOBP04114 4563 aaKnown RBP1.93□□□□□ -2.1
KCNMA1-223ENST00000604624 KRTAP10-12P60413 245 aa1.9□□□□□ -2.1
KCNMA1-223ENST00000604624 FRAS1Q86XX4 4008 aa1.89□□□□□ -2.11
KCNMA1-223ENST00000604624 RNF213Q63HN8 5207 aa1.88□□□□□ -2.11
KCNMA1-223ENST00000604624 HSPG2P98160 4391 aa1.88□□□□□ -2.11
KCNMA1-223ENST00000604624 ALMS1Q8TCU4 4167 aa1.88□□□□□ -2.11
KCNMA1-223ENST00000604624 FAT3Q8TDW7 4589 aa1.88□□□□□ -2.11
KCNMA1-223ENST00000604624 HECTD4Q9Y4D8 3996 aa1.86□□□□□ -2.11
KCNMA1-223ENST00000604624 FAT4Q6V0I7 4981 aa1.86□□□□□ -2.11
KCNMA1-223ENST00000604624 MT1HL1P0DM35 61 aa1.84□□□□□ -2.12
KCNMA1-223ENST00000604624 KMT2AQ03164 3969 aa1.83□□□□□ -2.12
KCNMA1-223ENST00000604624 KRTAP12-3P60328 96 aa1.83□□□□□ -2.12
KCNMA1-223ENST00000604624 PKHD1L1Q86WI1 4243 aa1.82□□□□□ -2.12
KCNMA1-223ENST00000604624 MYCBP2O75592 4640 aa1.81□□□□□ -2.12
KCNMA1-223ENST00000604624 PKD1P98161 4303 aa1.81□□□□□ -2.12
KCNMA1-223ENST00000604624 VPS13BQ7Z7G8 4022 aa1.8□□□□□ -2.12
KCNMA1-223ENST00000604624 KRTAP3-3Q9BYR6 98 aa1.79□□□□□ -2.12
KCNMA1-223ENST00000604624 KRTAP3-2Q9BYR7 98 aa1.79□□□□□ -2.12
KCNMA1-223ENST00000604624 LORP23490 312 aaPredicted RBP1.77□□□□□ -2.13
KCNMA1-223ENST00000604624 LCE3AQ5TA76 89 aa1.76□□□□□ -2.13
KCNMA1-223ENST00000604624 PKHD1P08F94 4074 aa1.75□□□□□ -2.13
KCNMA1-223ENST00000604624 KRTAP8-1Q8IUC2 63 aa1.75□□□□□ -2.13
KCNMA1-223ENST00000604624 KRTAP3-1Q9BYR8 98 aa1.75□□□□□ -2.13
KCNMA1-223ENST00000604624 KRTAP19-2Q3LHN2 52 aa1.74□□□□□ -2.13
KCNMA1-223ENST00000604624 KRTAP17-1Q9BYP8 105 aa1.73□□□□□ -2.13
KCNMA1-223ENST00000604624 LRP1Q07954 4544 aaKnown RBP1.69□□□□□ -2.14
KCNMA1-223ENST00000604624 MUC17Q685J3 4493 aa1.69□□□□□ -2.14
KCNMA1-223ENST00000604624 USH2AO75445 5202 aa1.69□□□□□ -2.14
KCNMA1-223ENST00000604624 MUC2Q02817 5179 aa1.65□□□□□ -2.15
KCNMA1-223ENST00000604624 SSPOA2VEC9 5147 aa1.63□□□□□ -2.15
KCNMA1-223ENST00000604624 TNXBP22105 4242 aa1.63□□□□□ -2.15
KCNMA1-223ENST00000604624 SPRR2FQ96RM1 72 aa1.63□□□□□ -2.15
KCNMA1-223ENST00000604624 LRP2P98164 4655 aa1.62□□□□□ -2.15
KCNMA1-223ENST00000604624 LCE2CQ5TA81 110 aa1.61□□□□□ -2.15
KCNMA1-223ENST00000604624 LCE3BQ5TA77 95 aa1.61□□□□□ -2.15
KCNMA1-223ENST00000604624 KRTAP4-5Q9BYR2 181 aa1.6□□□□□ -2.15
KCNMA1-223ENST00000604624 LCE2AQ5TA79 106 aaPredicted RBP1.59□□□□□ -2.16
KCNMA1-223ENST00000604624 KRTAP19-4Q3LI73 84 aa1.56□□□□□ -2.16
KCNMA1-223ENST00000604624 SPRR2GQ9BYE4 73 aa1.56□□□□□ -2.16
KCNMA1-223ENST00000604624 KRTAP12-4P60329 112 aa1.56□□□□□ -2.16
KCNMA1-223ENST00000604624 KRTAP19-8Q3LI54 63 aa1.56□□□□□ -2.16
KCNMA1-223ENST00000604624 LCE3CQ5T5A8 94 aa1.56□□□□□ -2.16
KCNMA1-223ENST00000604624 KRTAP4-1Q9BYQ7 146 aa1.54□□□□□ -2.16
KCNMA1-223ENST00000604624 KRTAP19-5Q3LI72 72 aa1.53□□□□□ -2.16
KCNMA1-223ENST00000604624 SPRR5A0A1B0GTR4 108 aa1.52□□□□□ -2.17
KCNMA1-223ENST00000604624 LCE3EQ5T5B0 92 aa1.52□□□□□ -2.17
KCNMA1-223ENST00000604624 FLGP20930 4061 aaPredicted RBP1.51□□□□□ -2.17
KCNMA1-223ENST00000604624 MT1HP80294 61 aa1.51□□□□□ -2.17
KCNMA1-223ENST00000604624 KRTAP9-8Q9BYQ0 159 aa1.5□□□□□ -2.17
KCNMA1-223ENST00000604624 MT3P25713 68 aa1.5□□□□□ -2.17
KCNMA1-223ENST00000604624 KRTAP19-1Q8IUB9 90 aa1.5□□□□□ -2.17
KCNMA1-223ENST00000604624 SPRR2EP22531 72 aa1.49□□□□□ -2.17
KCNMA1-223ENST00000604624 SPRR2BP35325 72 aa1.49□□□□□ -2.17
KCNMA1-223ENST00000604624 SPRR2AP35326 72 aa1.49□□□□□ -2.17
KCNMA1-223ENST00000604624 MT2AP02795 61 aa1.47□□□□□ -2.17
KCNMA1-223ENST00000604624 LCE3DQ9BYE3 92 aa1.47□□□□□ -2.17
KCNMA1-223ENST00000604624 LCE2DQ5TA82 110 aaPredicted RBP1.46□□□□□ -2.18
KCNMA1-223ENST00000604624 LPAP08519 4548 aa1.46□□□□□ -2.18
KCNMA1-223ENST00000604624 KRTAP9-3Q9BYQ3 159 aa1.46□□□□□ -2.18
KCNMA1-223ENST00000604624 SYNE2Q8WXH0 6885 aaKnown RBP1.46□□□□□ -2.18
KCNMA1-223ENST00000604624 MT1GP13640 62 aa1.45□□□□□ -2.18
KCNMA1-223ENST00000604624 SPRR2DP22532 72 aa1.45□□□□□ -2.18
KCNMA1-223ENST00000604624 LCE2BO14633 110 aa1.44□□□□□ -2.18
KCNMA1-223ENST00000604624 MT1BP07438 61 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms