RNA–Protein interactions for RNA: ENST00000599227.5

ZNF544-213, Transcript of zinc finger protein 544, humanhuman

TSL 1 (best) BASIC

Gene ZNF544, Length 3,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-213ENST00000599227 KRTAP3-1Q9BYR8 98 aa5.98□□□□□ -1.45
ZNF544-213ENST00000599227 PKD1P98161 4303 aa5.97□□□□□ -1.45
ZNF544-213ENST00000599227 RYR1P21817 5038 aa5.94□□□□□ -1.46
ZNF544-213ENST00000599227 COX6B2Q6YFQ2 88 aa5.94□□□□□ -1.46
ZNF544-213ENST00000599227 A8MUU9 505 aa5.93□□□□□ -1.46
ZNF544-213ENST00000599227 H1FX-AS1Q4G0G2 97 aa5.93□□□□□ -1.46
ZNF544-213ENST00000599227 ROMO1P60602 79 aa5.92□□□□□ -1.46
ZNF544-213ENST00000599227 C20orf166-AS1Q96NR2 134 aa5.91□□□□□ -1.46
ZNF544-213ENST00000599227 APOBP04114 4563 aaKnown RBP5.87□□□□□ -1.47
ZNF544-213ENST00000599227 SACSQ9NZJ4 4579 aa5.87□□□□□ -1.47
ZNF544-213ENST00000599227 A0A1B0GVY2 172 aa5.86□□□□□ -1.47
ZNF544-213ENST00000599227 RYR3Q15413 4870 aa5.85□□□□□ -1.47
ZNF544-213ENST00000599227 KRTAP21-3Q3LHN1 58 aa5.85□□□□□ -1.47
ZNF544-213ENST00000599227 S4R3F8 94 aa5.85□□□□□ -1.47
ZNF544-213ENST00000599227 RPS29P62273 56 aaKnown RBP5.84□□□□□ -1.47
ZNF544-213ENST00000599227 KRTAP10-8P60410 259 aa5.83□□□□□ -1.48
ZNF544-213ENST00000599227 KRTAP25-1Q3LHN0 102 aa5.82□□□□□ -1.48
ZNF544-213ENST00000599227 KRTAP4-5Q9BYR2 181 aa5.82□□□□□ -1.48
ZNF544-213ENST00000599227 XP32Q5T750 250 aa5.81□□□□□ -1.48
ZNF544-213ENST00000599227 NDUFAF8A1L188 74 aa5.8□□□□□ -1.48
ZNF544-213ENST00000599227 KRTAP10-4P60372 401 aaPredicted RBP5.8□□□□□ -1.48
ZNF544-213ENST00000599227 P0C880 135 aa5.77□□□□□ -1.49
ZNF544-213ENST00000599227 C10orf95Q9H7T3 257 aa5.75□□□□□ -1.49
ZNF544-213ENST00000599227 KRTAP13-4Q3LI77 160 aa5.74□□□□□ -1.49
ZNF544-213ENST00000599227 LRP2P98164 4655 aa5.73□□□□□ -1.49
ZNF544-213ENST00000599227 RPL37P61927 97 aaKnown RBP5.73□□□□□ -1.49
ZNF544-213ENST00000599227 KRTAP17-1Q9BYP8 105 aa5.73□□□□□ -1.49
ZNF544-213ENST00000599227 M0QZ58 72 aa5.7□□□□□ -1.5
ZNF544-213ENST00000599227 HSPG2P98160 4391 aa5.7□□□□□ -1.5
ZNF544-213ENST00000599227 EPPK1P58107 5090 aaKnown RBP5.69□□□□□ -1.5
ZNF544-213ENST00000599227 R4GN34 69 aa5.68□□□□□ -1.5
ZNF544-213ENST00000599227 M0R2T5 61 aa5.68□□□□□ -1.5
ZNF544-213ENST00000599227 KRTAP10-6P60371 365 aaPredicted RBP5.67□□□□□ -1.5
ZNF544-213ENST00000599227 KRTAP23-1A1A580 65 aa5.67□□□□□ -1.5
ZNF544-213ENST00000599227 SEC61BP60468 96 aaKnown RBP5.66□□□□□ -1.5
ZNF544-213ENST00000599227 PKHD1L1Q86WI1 4243 aa5.64□□□□□ -1.51
ZNF544-213ENST00000599227 RYR2Q92736 4967 aa5.63□□□□□ -1.51
ZNF544-213ENST00000599227 LPAP08519 4548 aa5.61□□□□□ -1.51
ZNF544-213ENST00000599227 CAMK2N1Q7Z7J9 78 aa5.6□□□□□ -1.51
ZNF544-213ENST00000599227 MUC2Q02817 5179 aa5.58□□□□□ -1.52
ZNF544-213ENST00000599227 KRTAP12-2P59991 146 aa5.58□□□□□ -1.52
ZNF544-213ENST00000599227 MT1HL1P0DM35 61 aa5.57□□□□□ -1.52
ZNF544-213ENST00000599227 TPRXLQ17RH7 258 aa5.57□□□□□ -1.52
ZNF544-213ENST00000599227 LUZP6Q538Z0 58 aa5.5□□□□□ -1.53
ZNF544-213ENST00000599227 TNXBP22105 4242 aa5.49□□□□□ -1.53
ZNF544-213ENST00000599227 ABCA13Q86UQ4 5058 aa5.48□□□□□ -1.53
ZNF544-213ENST00000599227 HERC2O95714 4834 aa5.46□□□□□ -1.53
ZNF544-213ENST00000599227 KRTAP12-1P59990 96 aa5.45□□□□□ -1.54
ZNF544-213ENST00000599227 RNF213Q63HN8 5207 aa5.43□□□□□ -1.54
ZNF544-213ENST00000599227 PCLOQ9Y6V0 5065 aa5.36□□□□□ -1.55
ZNF544-213ENST00000599227 HERC1Q15751 4861 aa5.35□□□□□ -1.55
ZNF544-213ENST00000599227 KRTAP4-1Q9BYQ7 146 aa5.32□□□□□ -1.56
ZNF544-213ENST00000599227 FAT4Q6V0I7 4981 aa5.32□□□□□ -1.56
ZNF544-213ENST00000599227 KRTAP15-1Q3LI76 137 aa5.26□□□□□ -1.57
ZNF544-213ENST00000599227 FSIP2Q5CZC0 6907 aa5.23□□□□□ -1.57
ZNF544-213ENST00000599227 UBR4Q5T4S7 5183 aa5.19□□□□□ -1.58
ZNF544-213ENST00000599227 KRTAP10-10P60014 251 aa5.18□□□□□ -1.58
ZNF544-213ENST00000599227 PLAC4Q8WY50 150 aa5.12□□□□□ -1.59
ZNF544-213ENST00000599227 HMCN2Q8NDA2 5059 aa5□□□□□ -1.61
ZNF544-213ENST00000599227 TNP1P09430 55 aa5□□□□□ -1.61
ZNF544-213ENST00000599227 MUC17Q685J3 4493 aa4.99□□□□□ -1.61
ZNF544-213ENST00000599227 BIRC6Q9NR09 4857 aa4.94□□□□□ -1.62
ZNF544-213ENST00000599227 KRTAP19-2Q3LHN2 52 aa4.87□□□□□ -1.63
ZNF544-213ENST00000599227 USH2AO75445 5202 aa4.86□□□□□ -1.63
ZNF544-213ENST00000599227 PP632Q6XCG6 107 aa4.84□□□□□ -1.64
ZNF544-213ENST00000599227 OBSCNQ5VST9 7968 aa4.81□□□□□ -1.64
ZNF544-213ENST00000599227 FLGP20930 4061 aaPredicted RBP4.79□□□□□ -1.64
ZNF544-213ENST00000599227 MT1HP80294 61 aa4.73□□□□□ -1.65
ZNF544-213ENST00000599227 MT1FP04733 61 aa4.71□□□□□ -1.65
ZNF544-213ENST00000599227 KMT2DO14686 5537 aa4.69□□□□□ -1.66
ZNF544-213ENST00000599227 LCE3AQ5TA76 89 aa4.68□□□□□ -1.66
ZNF544-213ENST00000599227 MT2AP02795 61 aa4.66□□□□□ -1.66
ZNF544-213ENST00000599227 KRTAP19-1Q8IUB9 90 aa4.65□□□□□ -1.67
ZNF544-213ENST00000599227 DSTQ03001 7570 aaKnown RBP4.58□□□□□ -1.68
ZNF544-213ENST00000599227 SPRR2GQ9BYE4 73 aa4.57□□□□□ -1.68
ZNF544-213ENST00000599227 LCE4AQ5TA78 99 aa4.53□□□□□ -1.68
ZNF544-213ENST00000599227 SYNE1Q8NF91 8797 aaKnown RBP4.52□□□□□ -1.69
ZNF544-213ENST00000599227 KRTAP9-4Q9BYQ2 154 aa4.51□□□□□ -1.69
ZNF544-213ENST00000599227 KRTAP10-12P60413 245 aa4.5□□□□□ -1.69
ZNF544-213ENST00000599227 CRCT1Q9UGL9 99 aa4.5□□□□□ -1.69
ZNF544-213ENST00000599227 PRO2289Q9P1D8 64 aa4.49□□□□□ -1.69
ZNF544-213ENST00000599227 KRTAP9-9Q9BYP9 154 aa4.48□□□□□ -1.69
ZNF544-213ENST00000599227 KRTAP9-8Q9BYQ0 159 aa4.46□□□□□ -1.7
ZNF544-213ENST00000599227 KRTAP10-7P60409 375 aaPredicted RBP4.45□□□□□ -1.7
ZNF544-213ENST00000599227 KRTAP9-6A0A140TA67 174 aa4.44□□□□□ -1.7
ZNF544-213ENST00000599227 KRTAP9-7A8MTY7 169 aa4.44□□□□□ -1.7
ZNF544-213ENST00000599227 KRTAP12-3P60328 96 aa4.44□□□□□ -1.7
ZNF544-213ENST00000599227 KRTAP4-8A0A0G2JLE6 195 aa4.42□□□□□ -1.7
ZNF544-213ENST00000599227 KRTAP4-8Q9BYQ9 185 aa4.42□□□□□ -1.7
ZNF544-213ENST00000599227 FCGBPQ9Y6R7 5405 aaPredicted RBP4.41□□□□□ -1.7
ZNF544-213ENST00000599227 LCE5AQ5TCM9 118 aa4.4□□□□□ -1.71
ZNF544-213ENST00000599227 MT1BP07438 61 aa4.39□□□□□ -1.71
ZNF544-213ENST00000599227 MT1XP80297 61 aa4.39□□□□□ -1.71
ZNF544-213ENST00000599227 KRTAP10-5P60370 271 aa4.38□□□□□ -1.71
ZNF544-213ENST00000599227 SPRR5A0A1B0GTR4 108 aa4.38□□□□□ -1.71
ZNF544-213ENST00000599227 KRTAP8-1Q8IUC2 63 aa4.32□□□□□ -1.72
ZNF544-213ENST00000599227 KRTAP19-8Q3LI54 63 aa4.3□□□□□ -1.72
ZNF544-213ENST00000599227 KRTAP19-4Q3LI73 84 aa4.29□□□□□ -1.72
ZNF544-213ENST00000599227 KRTAP19-5Q3LI72 72 aa4.28□□□□□ -1.72
ZNF544-213ENST00000599227 INE1O15225 51 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms