RNA–Protein interactions for RNA: ENST00000586539.5

ABCA8-208, Transcript of ATP binding cassette subfamily A member 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCA8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-208ENST00000586539 ANK2Q01484 3957 aa5.06□□□□□ -1.6
ABCA8-208ENST00000586539 STARD9Q9P2P6 4700 aa5.06□□□□□ -1.6
ABCA8-208ENST00000586539 PRKDCP78527 4128 aaKnown RBP5.06□□□□□ -1.6
ABCA8-208ENST00000586539 KRTAP10-4P60372 401 aaPredicted RBP5.03□□□□□ -1.6
ABCA8-208ENST00000586539 DNAH5Q8TE73 4624 aa5□□□□□ -1.61
ABCA8-208ENST00000586539 VPS13DQ5THJ4 4388 aa5□□□□□ -1.61
ABCA8-208ENST00000586539 KRTAP3-2Q9BYR7 98 aa4.97□□□□□ -1.61
ABCA8-208ENST00000586539 KMT2AQ03164 3969 aa4.96□□□□□ -1.62
ABCA8-208ENST00000586539 CMYA5Q8N3K9 4069 aa4.94□□□□□ -1.62
ABCA8-208ENST00000586539 LYSTQ99698 3801 aa4.93□□□□□ -1.62
ABCA8-208ENST00000586539 DNAH17Q9UFH2 4485 aa4.92□□□□□ -1.62
ABCA8-208ENST00000586539 FAT1Q14517 4588 aa4.91□□□□□ -1.62
ABCA8-208ENST00000586539 ALMS1Q8TCU4 4167 aa4.9□□□□□ -1.62
ABCA8-208ENST00000586539 KRTAP4-5Q9BYR2 181 aa4.89□□□□□ -1.63
ABCA8-208ENST00000586539 KRTAP3-3Q9BYR6 98 aa4.89□□□□□ -1.63
ABCA8-208ENST00000586539 DNAH3Q8TD57 4116 aa4.89□□□□□ -1.63
ABCA8-208ENST00000586539 DNAH2Q9P225 4427 aa4.87□□□□□ -1.63
ABCA8-208ENST00000586539 LRP1BQ9NZR2 4599 aa4.87□□□□□ -1.63
ABCA8-208ENST00000586539 KRTAP10-12P60413 245 aa4.86□□□□□ -1.63
ABCA8-208ENST00000586539 DNAH8Q96JB1 4490 aa4.86□□□□□ -1.63
ABCA8-208ENST00000586539 DYNC1H1Q14204 4646 aaKnown RBP4.85□□□□□ -1.63
ABCA8-208ENST00000586539 DNAH7Q8WXX0 4024 aa4.81□□□□□ -1.64
ABCA8-208ENST00000586539 KRTAP12-3P60328 96 aa4.81□□□□□ -1.64
ABCA8-208ENST00000586539 DYNC2H1Q8NCM8 4307 aaKnown RBP4.78□□□□□ -1.64
ABCA8-208ENST00000586539 FRAS1Q86XX4 4008 aa4.77□□□□□ -1.65
ABCA8-208ENST00000586539 DNAH6Q9C0G6 4158 aa4.75□□□□□ -1.65
ABCA8-208ENST00000586539 VPS13BQ7Z7G8 4022 aa4.73□□□□□ -1.65
ABCA8-208ENST00000586539 RYR1P21817 5038 aa4.71□□□□□ -1.66
ABCA8-208ENST00000586539 KRTAP10-5P60370 271 aa4.7□□□□□ -1.66
ABCA8-208ENST00000586539 MYCBP2O75592 4640 aa4.68□□□□□ -1.66
ABCA8-208ENST00000586539 HECTD4Q9Y4D8 3996 aa4.68□□□□□ -1.66
ABCA8-208ENST00000586539 SACSQ9NZJ4 4579 aa4.68□□□□□ -1.66
ABCA8-208ENST00000586539 FAT2Q9NYQ8 4349 aa4.68□□□□□ -1.66
ABCA8-208ENST00000586539 HYDINQ4G0P3 5121 aa4.67□□□□□ -1.66
ABCA8-208ENST00000586539 KIAA1109Q2LD37 5005 aa4.67□□□□□ -1.66
ABCA8-208ENST00000586539 LCE3AQ5TA76 89 aa4.66□□□□□ -1.66
ABCA8-208ENST00000586539 LRP1Q07954 4544 aaKnown RBP4.61□□□□□ -1.67
ABCA8-208ENST00000586539 RYR3Q15413 4870 aa4.6□□□□□ -1.67
ABCA8-208ENST00000586539 APOBP04114 4563 aaKnown RBP4.6□□□□□ -1.67
ABCA8-208ENST00000586539 CRCT1Q9UGL9 99 aa4.59□□□□□ -1.67
ABCA8-208ENST00000586539 PKHD1P08F94 4074 aa4.59□□□□□ -1.67
ABCA8-208ENST00000586539 KRTAP17-1Q9BYP8 105 aa4.56□□□□□ -1.68
ABCA8-208ENST00000586539 FAT3Q8TDW7 4589 aa4.55□□□□□ -1.68
ABCA8-208ENST00000586539 LORP23490 312 aaPredicted RBP4.53□□□□□ -1.68
ABCA8-208ENST00000586539 KRTAP8-1Q8IUC2 63 aa4.52□□□□□ -1.69
ABCA8-208ENST00000586539 RYR2Q92736 4967 aa4.51□□□□□ -1.69
ABCA8-208ENST00000586539 KRTAP4-1Q9BYQ7 146 aa4.49□□□□□ -1.69
ABCA8-208ENST00000586539 MT1HP80294 61 aa4.48□□□□□ -1.69
ABCA8-208ENST00000586539 KMT2CQ8NEZ4 4911 aaKnown RBP4.45□□□□□ -1.7
ABCA8-208ENST00000586539 SPRR2GQ9BYE4 73 aa4.43□□□□□ -1.7
ABCA8-208ENST00000586539 MT2AP02795 61 aa4.41□□□□□ -1.7
ABCA8-208ENST00000586539 PKD1P98161 4303 aa4.4□□□□□ -1.71
ABCA8-208ENST00000586539 HSPG2P98160 4391 aa4.37□□□□□ -1.71
ABCA8-208ENST00000586539 LRP2P98164 4655 aa4.36□□□□□ -1.71
ABCA8-208ENST00000586539 KRTAP19-4Q3LI73 84 aa4.35□□□□□ -1.71
ABCA8-208ENST00000586539 HERC2O95714 4834 aa4.33□□□□□ -1.72
ABCA8-208ENST00000586539 MT1FP04733 61 aa4.28□□□□□ -1.72
ABCA8-208ENST00000586539 SPRR5A0A1B0GTR4 108 aa4.26□□□□□ -1.73
ABCA8-208ENST00000586539 MT3P25713 68 aa4.26□□□□□ -1.73
ABCA8-208ENST00000586539 LPAP08519 4548 aa4.25□□□□□ -1.73
ABCA8-208ENST00000586539 EPPK1P58107 5090 aaKnown RBP4.22□□□□□ -1.73
ABCA8-208ENST00000586539 KRTAP12-4P60329 112 aa4.2□□□□□ -1.74
ABCA8-208ENST00000586539 KRTAP10-7P60409 375 aaPredicted RBP4.18□□□□□ -1.74
ABCA8-208ENST00000586539 PKHD1L1Q86WI1 4243 aa4.17□□□□□ -1.74
ABCA8-208ENST00000586539 LCE3CQ5T5A8 94 aa4.17□□□□□ -1.74
ABCA8-208ENST00000586539 SPRR2FQ96RM1 72 aa4.16□□□□□ -1.74
ABCA8-208ENST00000586539 KRTAP19-8Q3LI54 63 aa4.16□□□□□ -1.74
ABCA8-208ENST00000586539 TNXBP22105 4242 aa4.15□□□□□ -1.74
ABCA8-208ENST00000586539 KRTAP19-5Q3LI72 72 aa4.14□□□□□ -1.75
ABCA8-208ENST00000586539 BIRC6Q9NR09 4857 aa4.14□□□□□ -1.75
ABCA8-208ENST00000586539 ABCA13Q86UQ4 5058 aa4.11□□□□□ -1.75
ABCA8-208ENST00000586539 HERC1Q15751 4861 aa4.09□□□□□ -1.75
ABCA8-208ENST00000586539 KRTAP19-1Q8IUB9 90 aa4.04□□□□□ -1.76
ABCA8-208ENST00000586539 PCLOQ9Y6V0 5065 aa4.04□□□□□ -1.76
ABCA8-208ENST00000586539 SPRR2EP22531 72 aa3.95□□□□□ -1.78
ABCA8-208ENST00000586539 SPRR2BP35325 72 aa3.95□□□□□ -1.78
ABCA8-208ENST00000586539 SPRR2AP35326 72 aa3.95□□□□□ -1.78
ABCA8-208ENST00000586539 LCE2CQ5TA81 110 aa3.94□□□□□ -1.78
ABCA8-208ENST00000586539 MT1XP80297 61 aa3.93□□□□□ -1.78
ABCA8-208ENST00000586539 KRTAP9-8Q9BYQ0 159 aa3.92□□□□□ -1.78
ABCA8-208ENST00000586539 MT1BP07438 61 aa3.92□□□□□ -1.78
ABCA8-208ENST00000586539 MUC2Q02817 5179 aa3.9□□□□□ -1.79
ABCA8-208ENST00000586539 KRTAP19-2Q3LHN2 52 aa3.88□□□□□ -1.79
ABCA8-208ENST00000586539 LCE3EQ5T5B0 92 aa3.87□□□□□ -1.79
ABCA8-208ENST00000586539 MUC17Q685J3 4493 aa3.86□□□□□ -1.79
ABCA8-208ENST00000586539 KRTAP9-3Q9BYQ3 159 aa3.86□□□□□ -1.79
ABCA8-208ENST00000586539 MT1GP13640 62 aa3.85□□□□□ -1.79
ABCA8-208ENST00000586539 LCE3DQ9BYE3 92 aa3.85□□□□□ -1.79
ABCA8-208ENST00000586539 RNF213Q63HN8 5207 aa3.84□□□□□ -1.79
ABCA8-208ENST00000586539 SPRR2DP22532 72 aa3.84□□□□□ -1.79
ABCA8-208ENST00000586539 FLGP20930 4061 aaPredicted RBP3.84□□□□□ -1.79
ABCA8-208ENST00000586539 LCE2BO14633 110 aa3.83□□□□□ -1.8
ABCA8-208ENST00000586539 FAT4Q6V0I7 4981 aa3.8□□□□□ -1.8
ABCA8-208ENST00000586539 UBR4Q5T4S7 5183 aa3.8□□□□□ -1.8
ABCA8-208ENST00000586539 LCE3BQ5TA77 95 aa3.78□□□□□ -1.8
ABCA8-208ENST00000586539 HMCN2Q8NDA2 5059 aa3.73□□□□□ -1.81
ABCA8-208ENST00000586539 FSIP2Q5CZC0 6907 aa3.73□□□□□ -1.81
ABCA8-208ENST00000586539 PRM1P04553 51 aa3.71□□□□□ -1.82
ABCA8-208ENST00000586539 KRTAP4-8A0A0G2JLE6 195 aa3.68□□□□□ -1.82
ABCA8-208ENST00000586539 KRTAP4-8Q9BYQ9 185 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms