RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 FAT2Q9NYQ8 4349 aa5.95□□□□□ -1.46
TOP3A-217ENST00000584582 APOBP04114 4563 aaKnown RBP5.94□□□□□ -1.46
TOP3A-217ENST00000584582 ALMS1Q8TCU4 4167 aa5.93□□□□□ -1.46
TOP3A-217ENST00000584582 A0A0A0MQY5 61 aa5.93□□□□□ -1.46
TOP3A-217ENST00000584582 RPL37P61927 97 aaKnown RBP5.93□□□□□ -1.46
TOP3A-217ENST00000584582 KRTAP10-8P60410 259 aa5.92□□□□□ -1.46
TOP3A-217ENST00000584582 KRTAP3-1Q9BYR8 98 aa5.91□□□□□ -1.46
TOP3A-217ENST00000584582 H1FX-AS1Q4G0G2 97 aa5.9□□□□□ -1.46
TOP3A-217ENST00000584582 RYR1P21817 5038 aa5.88□□□□□ -1.47
TOP3A-217ENST00000584582 RYR3Q15413 4870 aa5.87□□□□□ -1.47
TOP3A-217ENST00000584582 PKD1P98161 4303 aa5.85□□□□□ -1.47
TOP3A-217ENST00000584582 H0YAA0 97 aa5.83□□□□□ -1.48
TOP3A-217ENST00000584582 KRTAP4-5Q9BYR2 181 aa5.83□□□□□ -1.48
TOP3A-217ENST00000584582 RYR2Q92736 4967 aa5.8□□□□□ -1.48
TOP3A-217ENST00000584582 KRTAP17-1Q9BYP8 105 aa5.77□□□□□ -1.49
TOP3A-217ENST00000584582 P0C880 135 aa5.77□□□□□ -1.49
TOP3A-217ENST00000584582 MT1HL1P0DM35 61 aa5.76□□□□□ -1.49
TOP3A-217ENST00000584582 SEC61BP60468 96 aaKnown RBP5.74□□□□□ -1.49
TOP3A-217ENST00000584582 R4GN34 69 aa5.72□□□□□ -1.49
TOP3A-217ENST00000584582 M0QZ58 72 aa5.72□□□□□ -1.49
TOP3A-217ENST00000584582 TPRXLQ17RH7 258 aa5.66□□□□□ -1.5
TOP3A-217ENST00000584582 LRP2P98164 4655 aa5.65□□□□□ -1.5
TOP3A-217ENST00000584582 M0R2T5 61 aa5.63□□□□□ -1.51
TOP3A-217ENST00000584582 KRTAP13-4Q3LI77 160 aa5.62□□□□□ -1.51
TOP3A-217ENST00000584582 ROMO1P60602 79 aa5.62□□□□□ -1.51
TOP3A-217ENST00000584582 HSPG2P98160 4391 aa5.62□□□□□ -1.51
TOP3A-217ENST00000584582 EPPK1P58107 5090 aaKnown RBP5.61□□□□□ -1.51
TOP3A-217ENST00000584582 KRTAP25-1Q3LHN0 102 aa5.61□□□□□ -1.51
TOP3A-217ENST00000584582 C10orf95Q9H7T3 257 aa5.61□□□□□ -1.51
TOP3A-217ENST00000584582 KRTAP3-3Q9BYR6 98 aa5.59□□□□□ -1.51
TOP3A-217ENST00000584582 CAMK2N1Q7Z7J9 78 aa5.59□□□□□ -1.52
TOP3A-217ENST00000584582 KRTAP10-6P60371 365 aaPredicted RBP5.57□□□□□ -1.52
TOP3A-217ENST00000584582 LPAP08519 4548 aa5.55□□□□□ -1.52
TOP3A-217ENST00000584582 PKHD1L1Q86WI1 4243 aa5.52□□□□□ -1.53
TOP3A-217ENST00000584582 KRTAP12-2P59991 146 aa5.5□□□□□ -1.53
TOP3A-217ENST00000584582 KRTAP3-2Q9BYR7 98 aa5.49□□□□□ -1.53
TOP3A-217ENST00000584582 HERC2O95714 4834 aa5.48□□□□□ -1.53
TOP3A-217ENST00000584582 ABCA13Q86UQ4 5058 aa5.44□□□□□ -1.54
TOP3A-217ENST00000584582 MUC2Q02817 5179 aa5.4□□□□□ -1.55
TOP3A-217ENST00000584582 TNXBP22105 4242 aa5.39□□□□□ -1.55
TOP3A-217ENST00000584582 KRTAP12-1P59990 96 aa5.38□□□□□ -1.55
TOP3A-217ENST00000584582 KRTAP4-1Q9BYQ7 146 aa5.38□□□□□ -1.55
TOP3A-217ENST00000584582 NDUFAF8A1L188 74 aa5.36□□□□□ -1.55
TOP3A-217ENST00000584582 LORP23490 312 aaPredicted RBP5.35□□□□□ -1.55
TOP3A-217ENST00000584582 HERC1Q15751 4861 aa5.26□□□□□ -1.57
TOP3A-217ENST00000584582 RNF213Q63HN8 5207 aa5.21□□□□□ -1.58
TOP3A-217ENST00000584582 KRTAP10-10P60014 251 aa5.2□□□□□ -1.58
TOP3A-217ENST00000584582 PLAC4Q8WY50 150 aa5.2□□□□□ -1.58
TOP3A-217ENST00000584582 FAT4Q6V0I7 4981 aa5.17□□□□□ -1.58
TOP3A-217ENST00000584582 BIRC6Q9NR09 4857 aa5.11□□□□□ -1.59
TOP3A-217ENST00000584582 TNP1P09430 55 aa5.09□□□□□ -1.59
TOP3A-217ENST00000584582 PCLOQ9Y6V0 5065 aa5.08□□□□□ -1.6
TOP3A-217ENST00000584582 LUZP6Q538Z0 58 aa5.06□□□□□ -1.6
TOP3A-217ENST00000584582 UBR4Q5T4S7 5183 aa5.05□□□□□ -1.6
TOP3A-217ENST00000584582 KRTAP15-1Q3LI76 137 aa4.98□□□□□ -1.61
TOP3A-217ENST00000584582 MUC17Q685J3 4493 aa4.87□□□□□ -1.63
TOP3A-217ENST00000584582 PP632Q6XCG6 107 aa4.87□□□□□ -1.63
TOP3A-217ENST00000584582 MT1HP80294 61 aa4.87□□□□□ -1.63
TOP3A-217ENST00000584582 HMCN2Q8NDA2 5059 aa4.86□□□□□ -1.63
TOP3A-217ENST00000584582 KRTAP19-2Q3LHN2 52 aa4.86□□□□□ -1.63
TOP3A-217ENST00000584582 MT1FP04733 61 aa4.81□□□□□ -1.64
TOP3A-217ENST00000584582 FSIP2Q5CZC0 6907 aa4.8□□□□□ -1.64
TOP3A-217ENST00000584582 LCE2CQ5TA81 110 aa4.79□□□□□ -1.64
TOP3A-217ENST00000584582 FLGP20930 4061 aaPredicted RBP4.79□□□□□ -1.64
TOP3A-217ENST00000584582 MT2AP02795 61 aa4.79□□□□□ -1.64
TOP3A-217ENST00000584582 KRTAP23-1A1A580 65 aa4.74□□□□□ -1.65
TOP3A-217ENST00000584582 KRTAP19-1Q8IUB9 90 aa4.73□□□□□ -1.65
TOP3A-217ENST00000584582 LCE3AQ5TA76 89 aa4.7□□□□□ -1.66
TOP3A-217ENST00000584582 SPRR2GQ9BYE4 73 aa4.67□□□□□ -1.66
TOP3A-217ENST00000584582 PRO2289Q9P1D8 64 aa4.64□□□□□ -1.67
TOP3A-217ENST00000584582 USH2AO75445 5202 aa4.63□□□□□ -1.67
TOP3A-217ENST00000584582 KRTAP9-8Q9BYQ0 159 aa4.62□□□□□ -1.67
TOP3A-217ENST00000584582 KRTAP10-12P60413 245 aa4.59□□□□□ -1.68
TOP3A-217ENST00000584582 LCE2DQ5TA82 110 aaPredicted RBP4.53□□□□□ -1.68
TOP3A-217ENST00000584582 KRTAP12-3P60328 96 aa4.51□□□□□ -1.69
TOP3A-217ENST00000584582 MT1BP07438 61 aa4.49□□□□□ -1.69
TOP3A-217ENST00000584582 KRTAP10-7P60409 375 aaPredicted RBP4.47□□□□□ -1.69
TOP3A-217ENST00000584582 MT1XP80297 61 aa4.45□□□□□ -1.7
TOP3A-217ENST00000584582 KMT2DO14686 5537 aa4.44□□□□□ -1.7
TOP3A-217ENST00000584582 KRTAP10-5P60370 271 aa4.44□□□□□ -1.7
TOP3A-217ENST00000584582 KRTAP9-3Q9BYQ3 159 aa4.42□□□□□ -1.7
TOP3A-217ENST00000584582 KRTAP19-8Q3LI54 63 aa4.41□□□□□ -1.7
TOP3A-217ENST00000584582 LCE2BO14633 110 aa4.37□□□□□ -1.71
TOP3A-217ENST00000584582 KRTAP4-8A0A0G2JLE6 195 aa4.36□□□□□ -1.71
TOP3A-217ENST00000584582 KRTAP4-8Q9BYQ9 185 aa4.36□□□□□ -1.71
TOP3A-217ENST00000584582 KRTAP19-5Q3LI72 72 aa4.32□□□□□ -1.72
TOP3A-217ENST00000584582 KRTAP8-1Q8IUC2 63 aa4.31□□□□□ -1.72
TOP3A-217ENST00000584582 LCE2AQ5TA79 106 aaPredicted RBP4.3□□□□□ -1.72
TOP3A-217ENST00000584582 CRCT1Q9UGL9 99 aa4.28□□□□□ -1.72
TOP3A-217ENST00000584582 DSTQ03001 7570 aaKnown RBP4.2□□□□□ -1.74
TOP3A-217ENST00000584582 OBSCNQ5VST9 7968 aa4.17□□□□□ -1.74
TOP3A-217ENST00000584582 KRTAP4-7Q9BYR0 210 aa4.15□□□□□ -1.74
TOP3A-217ENST00000584582 SPRR5A0A1B0GTR4 108 aa4.11□□□□□ -1.75
TOP3A-217ENST00000584582 LCE3CQ5T5A8 94 aa4.09□□□□□ -1.75
TOP3A-217ENST00000584582 FCGBPQ9Y6R7 5405 aaPredicted RBP4.09□□□□□ -1.75
TOP3A-217ENST00000584582 SYNE1Q8NF91 8797 aaKnown RBP4.08□□□□□ -1.76
TOP3A-217ENST00000584582 SSPOA2VEC9 5147 aa4.03□□□□□ -1.76
TOP3A-217ENST00000584582 MUC12Q9UKN1 5478 aa4.02□□□□□ -1.77
TOP3A-217ENST00000584582 INE1O15225 51 aa4.01□□□□□ -1.77
TOP3A-217ENST00000584582 SPRR2FQ96RM1 72 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms