RNA–Protein interactions for RNA: ENST00000583590.5

DDX42-216, Transcript of DEAD-box helicase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene DDX42, Length 4,148 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-216ENST00000583590 ROMO1P60602 79 aa9.46□□□□□ -0.89
DDX42-216ENST00000583590 P0C880 135 aa9.45□□□□□ -0.9
DDX42-216ENST00000583590 M0QZ58 72 aa9.45□□□□□ -0.9
DDX42-216ENST00000583590 ALMS1Q8TCU4 4167 aa9.41□□□□□ -0.9
DDX42-216ENST00000583590 SEC61BP60468 96 aaKnown RBP9.4□□□□□ -0.9
DDX42-216ENST00000583590 KRTAP25-1Q3LHN0 102 aa9.38□□□□□ -0.91
DDX42-216ENST00000583590 A0A0A0MQY5 61 aa9.38□□□□□ -0.91
DDX42-216ENST00000583590 LRP1Q07954 4544 aaKnown RBP9.36□□□□□ -0.91
DDX42-216ENST00000583590 SACSQ9NZJ4 4579 aa9.32□□□□□ -0.92
DDX42-216ENST00000583590 C10orf95Q9H7T3 257 aa9.31□□□□□ -0.92
DDX42-216ENST00000583590 KIAA1109Q2LD37 5005 aa9.29□□□□□ -0.92
DDX42-216ENST00000583590 APOBP04114 4563 aaKnown RBP9.28□□□□□ -0.92
DDX42-216ENST00000583590 CAMK2N1Q7Z7J9 78 aa9.28□□□□□ -0.92
DDX42-216ENST00000583590 FAT2Q9NYQ8 4349 aa9.26□□□□□ -0.93
DDX42-216ENST00000583590 FAT3Q8TDW7 4589 aa9.24□□□□□ -0.93
DDX42-216ENST00000583590 KRTAP13-4Q3LI77 160 aa9.22□□□□□ -0.93
DDX42-216ENST00000583590 MT1HL1P0DM35 61 aa9.21□□□□□ -0.94
DDX42-216ENST00000583590 TPRXLQ17RH7 258 aa9.21□□□□□ -0.94
DDX42-216ENST00000583590 KMT2CQ8NEZ4 4911 aaKnown RBP9.21□□□□□ -0.94
DDX42-216ENST00000583590 RYR1P21817 5038 aa9.19□□□□□ -0.94
DDX42-216ENST00000583590 PKD1P98161 4303 aa9.17□□□□□ -0.94
DDX42-216ENST00000583590 M0R2T5 61 aa9.16□□□□□ -0.94
DDX42-216ENST00000583590 KRTAP10-6P60371 365 aaPredicted RBP9.16□□□□□ -0.94
DDX42-216ENST00000583590 KRTAP4-5Q9BYR2 181 aa9.16□□□□□ -0.94
DDX42-216ENST00000583590 KRTAP3-3Q9BYR6 98 aa9.13□□□□□ -0.95
DDX42-216ENST00000583590 RYR3Q15413 4870 aa9.12□□□□□ -0.95
DDX42-216ENST00000583590 KRTAP12-2P59991 146 aa9.07□□□□□ -0.96
DDX42-216ENST00000583590 RYR2Q92736 4967 aa9.03□□□□□ -0.96
DDX42-216ENST00000583590 KRTAP17-1Q9BYP8 105 aa9.01□□□□□ -0.97
DDX42-216ENST00000583590 KRTAP3-2Q9BYR7 98 aa9□□□□□ -0.97
DDX42-216ENST00000583590 NDUFAF8A1L188 74 aa8.95□□□□□ -0.98
DDX42-216ENST00000583590 KRTAP12-1P59990 96 aa8.91□□□□□ -0.98
DDX42-216ENST00000583590 LRP2P98164 4655 aa8.87□□□□□ -0.99
DDX42-216ENST00000583590 LUZP6Q538Z0 58 aa8.84□□□□□ -0.99
DDX42-216ENST00000583590 HSPG2P98160 4391 aa8.77□□□□□ -1.01
DDX42-216ENST00000583590 PKHD1L1Q86WI1 4243 aa8.66□□□□□ -1.02
DDX42-216ENST00000583590 LPAP08519 4548 aa8.66□□□□□ -1.02
DDX42-216ENST00000583590 LORP23490 312 aaPredicted RBP8.64□□□□□ -1.03
DDX42-216ENST00000583590 PLAC4Q8WY50 150 aa8.62□□□□□ -1.03
DDX42-216ENST00000583590 EPPK1P58107 5090 aaKnown RBP8.6□□□□□ -1.03
DDX42-216ENST00000583590 KRTAP4-1Q9BYQ7 146 aa8.58□□□□□ -1.04
DDX42-216ENST00000583590 TNXBP22105 4242 aa8.5□□□□□ -1.05
DDX42-216ENST00000583590 HERC2O95714 4834 aa8.5□□□□□ -1.05
DDX42-216ENST00000583590 TNP1P09430 55 aa8.49□□□□□ -1.05
DDX42-216ENST00000583590 KRTAP10-10P60014 251 aa8.44□□□□□ -1.06
DDX42-216ENST00000583590 ABCA13Q86UQ4 5058 aa8.41□□□□□ -1.06
DDX42-216ENST00000583590 MUC2Q02817 5179 aa8.27□□□□□ -1.09
DDX42-216ENST00000583590 PP632Q6XCG6 107 aa8.25□□□□□ -1.09
DDX42-216ENST00000583590 KRTAP15-1Q3LI76 137 aa8.16□□□□□ -1.1
DDX42-216ENST00000583590 HERC1Q15751 4861 aa8.03□□□□□ -1.12
DDX42-216ENST00000583590 RNF213Q63HN8 5207 aa7.95□□□□□ -1.14
DDX42-216ENST00000583590 FAT4Q6V0I7 4981 aa7.94□□□□□ -1.14
DDX42-216ENST00000583590 BIRC6Q9NR09 4857 aa7.92□□□□□ -1.14
DDX42-216ENST00000583590 PCLOQ9Y6V0 5065 aa7.8□□□□□ -1.16
DDX42-216ENST00000583590 MT1HP80294 61 aa7.79□□□□□ -1.16
DDX42-216ENST00000583590 KRTAP19-2Q3LHN2 52 aa7.76□□□□□ -1.17
DDX42-216ENST00000583590 LCE3AQ5TA76 89 aa7.71□□□□□ -1.17
DDX42-216ENST00000583590 UBR4Q5T4S7 5183 aa7.71□□□□□ -1.17
DDX42-216ENST00000583590 MUC17Q685J3 4493 aa7.7□□□□□ -1.18
DDX42-216ENST00000583590 MT1FP04733 61 aa7.7□□□□□ -1.18
DDX42-216ENST00000583590 MT2AP02795 61 aa7.69□□□□□ -1.18
DDX42-216ENST00000583590 PRO2289Q9P1D8 64 aa7.67□□□□□ -1.18
DDX42-216ENST00000583590 FLGP20930 4061 aaPredicted RBP7.63□□□□□ -1.19
DDX42-216ENST00000583590 LCE2CQ5TA81 110 aa7.62□□□□□ -1.19
DDX42-216ENST00000583590 KRTAP19-1Q8IUB9 90 aa7.62□□□□□ -1.19
DDX42-216ENST00000583590 SPRR2GQ9BYE4 73 aa7.61□□□□□ -1.19
DDX42-216ENST00000583590 KRTAP10-12P60413 245 aa7.54□□□□□ -1.2
DDX42-216ENST00000583590 HMCN2Q8NDA2 5059 aa7.53□□□□□ -1.2
DDX42-216ENST00000583590 KRTAP12-3P60328 96 aa7.44□□□□□ -1.22
DDX42-216ENST00000583590 KRTAP9-8Q9BYQ0 159 aa7.38□□□□□ -1.23
DDX42-216ENST00000583590 KRTAP23-1A1A580 65 aa7.36□□□□□ -1.23
DDX42-216ENST00000583590 FSIP2Q5CZC0 6907 aa7.32□□□□□ -1.24
DDX42-216ENST00000583590 MT1BP07438 61 aa7.23□□□□□ -1.25
DDX42-216ENST00000583590 KRTAP10-7P60409 375 aaPredicted RBP7.22□□□□□ -1.25
DDX42-216ENST00000583590 MT1XP80297 61 aa7.2□□□□□ -1.26
DDX42-216ENST00000583590 KRTAP10-5P60370 271 aa7.17□□□□□ -1.26
DDX42-216ENST00000583590 KRTAP19-8Q3LI54 63 aa7.17□□□□□ -1.26
DDX42-216ENST00000583590 KRTAP8-1Q8IUC2 63 aa7.11□□□□□ -1.27
DDX42-216ENST00000583590 USH2AO75445 5202 aa7.08□□□□□ -1.28
DDX42-216ENST00000583590 KRTAP9-3Q9BYQ3 159 aa7.07□□□□□ -1.28
DDX42-216ENST00000583590 KRTAP19-5Q3LI72 72 aa7.03□□□□□ -1.28
DDX42-216ENST00000583590 KRTAP4-8A0A0G2JLE6 195 aa6.98□□□□□ -1.29
DDX42-216ENST00000583590 KRTAP4-8Q9BYQ9 185 aa6.98□□□□□ -1.29
DDX42-216ENST00000583590 CRCT1Q9UGL9 99 aa6.95□□□□□ -1.3
DDX42-216ENST00000583590 LCE2BO14633 110 aa6.92□□□□□ -1.3
DDX42-216ENST00000583590 KMT2DO14686 5537 aa6.88□□□□□ -1.31
DDX42-216ENST00000583590 SPRR5A0A1B0GTR4 108 aa6.87□□□□□ -1.31
DDX42-216ENST00000583590 LCE3CQ5T5A8 94 aa6.75□□□□□ -1.33
DDX42-216ENST00000583590 KRTAP4-7Q9BYR0 210 aa6.67□□□□□ -1.34
DDX42-216ENST00000583590 INE1O15225 51 aa6.63□□□□□ -1.35
DDX42-216ENST00000583590 LCE2AQ5TA79 106 aaPredicted RBP6.54□□□□□ -1.36
DDX42-216ENST00000583590 DSTQ03001 7570 aaKnown RBP6.51□□□□□ -1.37
DDX42-216ENST00000583590 SYNE1Q8NF91 8797 aaKnown RBP6.43□□□□□ -1.38
DDX42-216ENST00000583590 OBSCNQ5VST9 7968 aa6.42□□□□□ -1.38
DDX42-216ENST00000583590 SPRR2FQ96RM1 72 aa6.39□□□□□ -1.39
DDX42-216ENST00000583590 FCGBPQ9Y6R7 5405 aaPredicted RBP6.37□□□□□ -1.39
DDX42-216ENST00000583590 KRTAP19-7Q3SYF9 63 aa6.32□□□□□ -1.4
DDX42-216ENST00000583590 MT1GP13640 62 aa6.31□□□□□ -1.4
DDX42-216ENST00000583590 MT1LQ93083 61 aa6.28□□□□□ -1.4
DDX42-216ENST00000583590 MT1EP04732 61 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms