RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 DNAH10Q8IVF4 4471 aa1.6□□□□□ -2.15
CDH8-205ENST00000577730 MKI67P46013 3256 aaKnown RBP1.6□□□□□ -2.15
CDH8-205ENST00000577730 HUWE1Q7Z6Z7 4374 aaKnown RBP1.59□□□□□ -2.15
CDH8-205ENST00000577730 FBN3Q75N90 2809 aa1.59□□□□□ -2.16
CDH8-205ENST00000577730 OTOGQ6ZRI0 2925 aa1.58□□□□□ -2.16
CDH8-205ENST00000577730 BOD1L1Q8NFC6 3051 aa1.58□□□□□ -2.16
CDH8-205ENST00000577730 DNAH5Q8TE73 4624 aa1.58□□□□□ -2.16
CDH8-205ENST00000577730 EYSQ5T1H1 3165 aa1.57□□□□□ -2.16
CDH8-205ENST00000577730 MYCBP2O75592 4640 aa1.57□□□□□ -2.16
CDH8-205ENST00000577730 USP34Q70CQ2 3546 aa1.57□□□□□ -2.16
CDH8-205ENST00000577730 PLECQ15149 4684 aaKnown RBP1.57□□□□□ -2.16
CDH8-205ENST00000577730 KRTAP4-1Q9BYQ7 146 aa1.57□□□□□ -2.16
CDH8-205ENST00000577730 FAT1Q14517 4588 aa1.56□□□□□ -2.16
CDH8-205ENST00000577730 APOBP04114 4563 aaKnown RBP1.56□□□□□ -2.16
CDH8-205ENST00000577730 SACSQ9NZJ4 4579 aa1.56□□□□□ -2.16
CDH8-205ENST00000577730 MUC12Q9UKN1 5478 aa1.56□□□□□ -2.16
CDH8-205ENST00000577730 CELSR1Q9NYQ6 3014 aa1.55□□□□□ -2.16
CDH8-205ENST00000577730 DNAH8Q96JB1 4490 aa1.55□□□□□ -2.16
CDH8-205ENST00000577730 LAMA3Q16787 3333 aa1.55□□□□□ -2.16
CDH8-205ENST00000577730 MT2AP02795 61 aa1.54□□□□□ -2.16
CDH8-205ENST00000577730 VCANP13611 3396 aa1.54□□□□□ -2.16
CDH8-205ENST00000577730 KRTAP4-8Q9BYQ9 185 aa1.54□□□□□ -2.16
CDH8-205ENST00000577730 DMXL1Q9Y485 3027 aa1.53□□□□□ -2.16
CDH8-205ENST00000577730 DNAH17Q9UFH2 4485 aa1.53□□□□□ -2.16
CDH8-205ENST00000577730 CDH23Q9H251 3354 aa1.53□□□□□ -2.16
CDH8-205ENST00000577730 REV3LO60673 3130 aa1.53□□□□□ -2.16
CDH8-205ENST00000577730 CELSR3Q9NYQ7 3312 aa1.53□□□□□ -2.16
CDH8-205ENST00000577730 ANK3Q12955 4377 aaKnown RBP1.53□□□□□ -2.16
CDH8-205ENST00000577730 SZT2Q5T011 3432 aa1.52□□□□□ -2.17
CDH8-205ENST00000577730 XIRP2A4UGR9 3374 aa1.52□□□□□ -2.17
CDH8-205ENST00000577730 KRTAP9-2Q9BYQ4 174 aa1.52□□□□□ -2.17
CDH8-205ENST00000577730 CFAP47Q6ZTR5 3102 aa1.51□□□□□ -2.17
CDH8-205ENST00000577730 KRTAP10-7P60409 375 aaPredicted RBP1.51□□□□□ -2.17
CDH8-205ENST00000577730 DYNC1H1Q14204 4646 aaKnown RBP1.51□□□□□ -2.17
CDH8-205ENST00000577730 COL7A1Q02388 2944 aa1.51□□□□□ -2.17
CDH8-205ENST00000577730 KRTAP5-3Q6L8H2 238 aa1.51□□□□□ -2.17
CDH8-205ENST00000577730 KRTAP4-2Q9BYR5 136 aa1.51□□□□□ -2.17
CDH8-205ENST00000577730 SPTBN5Q9NRC6 3674 aaKnown RBP1.51□□□□□ -2.17
CDH8-205ENST00000577730 MT1FP04733 61 aa1.51□□□□□ -2.17
CDH8-205ENST00000577730 COL6A3P12111 3177 aa1.51□□□□□ -2.17
CDH8-205ENST00000577730 MUC5ACP98088 5654 aa1.5□□□□□ -2.17
CDH8-205ENST00000577730 LCE3EQ5T5B0 92 aa1.5□□□□□ -2.17
CDH8-205ENST00000577730 KRTAP4-5Q9BYR2 181 aa1.5□□□□□ -2.17
CDH8-205ENST00000577730 DNAH9Q9NYC9 4486 aa1.5□□□□□ -2.17
CDH8-205ENST00000577730 KRTAP19-8Q3LI54 63 aa1.5□□□□□ -2.17
CDH8-205ENST00000577730 DNAH14Q0VDD8 3507 aa1.49□□□□□ -2.17
CDH8-205ENST00000577730 MT1HP80294 61 aa1.49□□□□□ -2.17
CDH8-205ENST00000577730 KRTAP19-1Q8IUB9 90 aa1.49□□□□□ -2.17
CDH8-205ENST00000577730 LCE3DQ9BYE3 92 aa1.49□□□□□ -2.17
CDH8-205ENST00000577730 KRTAP9-9Q9BYP9 154 aa1.49□□□□□ -2.17
CDH8-205ENST00000577730 KRTAP9-4Q9BYQ2 154 aa1.49□□□□□ -2.17
CDH8-205ENST00000577730 ZFHX4Q86UP3 3567 aa1.48□□□□□ -2.17
CDH8-205ENST00000577730 LCE3BQ5TA77 95 aa1.48□□□□□ -2.17
CDH8-205ENST00000577730 DCHS1Q96JQ0 3298 aa1.48□□□□□ -2.17
CDH8-205ENST00000577730 MYO15AQ9UKN7 3530 aa1.48□□□□□ -2.17
CDH8-205ENST00000577730 MT1XP80297 61 aa1.48□□□□□ -2.17
CDH8-205ENST00000577730 STARD9Q9P2P6 4700 aa1.47□□□□□ -2.17
CDH8-205ENST00000577730 LRP1BQ9NZR2 4599 aa1.46□□□□□ -2.18
CDH8-205ENST00000577730 KRTAP9-8Q9BYQ0 159 aa1.46□□□□□ -2.18
CDH8-205ENST00000577730 MT3P25713 68 aa1.46□□□□□ -2.18
CDH8-205ENST00000577730 PRM1P04553 51 aa1.45□□□□□ -2.18
CDH8-205ENST00000577730 KRTAP9-6A0A140TA67 174 aa1.45□□□□□ -2.18
CDH8-205ENST00000577730 DMDP11532 3685 aa1.45□□□□□ -2.18
CDH8-205ENST00000577730 WDFY3Q8IZQ1 3526 aa1.45□□□□□ -2.18
CDH8-205ENST00000577730 MT1GP13640 62 aa1.45□□□□□ -2.18
CDH8-205ENST00000577730 HSPG2P98160 4391 aa1.44□□□□□ -2.18
CDH8-205ENST00000577730 FBN1P35555 2871 aaKnown RBP1.44□□□□□ -2.18
CDH8-205ENST00000577730 CUBNO60494 3623 aa1.43□□□□□ -2.18
CDH8-205ENST00000577730 KRTAP4-12Q9BQ66 201 aa1.43□□□□□ -2.18
CDH8-205ENST00000577730 DNAH1Q9P2D7 4330 aa1.43□□□□□ -2.18
CDH8-205ENST00000577730 MT1BP07438 61 aa1.43□□□□□ -2.18
CDH8-205ENST00000577730 KRTAP2-3P0C7H8 128 aa1.43□□□□□ -2.18
CDH8-205ENST00000577730 KRTAP2-4Q9BYR9 128 aa1.43□□□□□ -2.18
CDH8-205ENST00000577730 KRTAP2-1Q9BYU5 128 aa1.43□□□□□ -2.18
CDH8-205ENST00000577730 LRP1Q07954 4544 aaKnown RBP1.42□□□□□ -2.18
CDH8-205ENST00000577730 LOC400499M0QZD8 3231 aa1.42□□□□□ -2.18
CDH8-205ENST00000577730 MUC3AQ02505 3323 aa1.42□□□□□ -2.18
CDH8-205ENST00000577730 KRTAP4-8A0A0G2JLE6 195 aa1.42□□□□□ -2.18
CDH8-205ENST00000577730 SPEGQ15772 3267 aa1.42□□□□□ -2.18
CDH8-205ENST00000577730 VPS13DQ5THJ4 4388 aa1.41□□□□□ -2.18
CDH8-205ENST00000577730 ASPMQ8IZT6 3477 aa1.41□□□□□ -2.18
CDH8-205ENST00000577730 CSMD1Q96PZ7 3565 aa1.4□□□□□ -2.18
CDH8-205ENST00000577730 KRTAP4-7Q9BYR0 210 aa1.4□□□□□ -2.19
CDH8-205ENST00000577730 FAT2Q9NYQ8 4349 aa1.39□□□□□ -2.19
CDH8-205ENST00000577730 KRTAP5-2Q701N4 177 aa1.38□□□□□ -2.19
CDH8-205ENST00000577730 LCE2BO14633 110 aa1.38□□□□□ -2.19
CDH8-205ENST00000577730 LCE2AQ5TA79 106 aaPredicted RBP1.37□□□□□ -2.19
CDH8-205ENST00000577730 CMYA5Q8N3K9 4069 aa1.37□□□□□ -2.19
CDH8-205ENST00000577730 MT1LQ93083 61 aa1.37□□□□□ -2.19
CDH8-205ENST00000577730 SPRR2FQ96RM1 72 aa1.37□□□□□ -2.19
CDH8-205ENST00000577730 AKAP9Q99996 3911 aa1.36□□□□□ -2.19
CDH8-205ENST00000577730 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.35□□□□□ -2.19
CDH8-205ENST00000577730 SPENQ96T58 3664 aaKnown RBP1.34□□□□□ -2.19
CDH8-205ENST00000577730 SMG1Q96Q15 3661 aaKnown RBP1.34□□□□□ -2.19
CDH8-205ENST00000577730 LAMA5O15230 3695 aa1.34□□□□□ -2.19
CDH8-205ENST00000577730 DYNC2H1Q8NCM8 4307 aaKnown RBP1.34□□□□□ -2.2
CDH8-205ENST00000577730 MT1EP04732 61 aa1.34□□□□□ -2.2
CDH8-205ENST00000577730 DNAH3Q8TD57 4116 aa1.33□□□□□ -2.2
CDH8-205ENST00000577730 SVEP1Q4LDE5 3571 aa1.33□□□□□ -2.2
CDH8-205ENST00000577730 RELNP78509 3460 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms