RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 PELP1Q8IZL8 1130 aaKnown RBP7.62□□□□□ -1.19
CDH8-205ENST00000577730 MYT1Q01538 1121 aa7.62□□□□□ -1.19
CDH8-205ENST00000577730 CENPBP07199 599 aaPredicted RBP7.06□□□□□ -1.28
CDH8-205ENST00000577730 TTBK1Q5TCY1 1321 aaPredicted RBP7.03□□□□□ -1.28
CDH8-205ENST00000577730 ERICH6Q7L0X2 663 aa6.98□□□□□ -1.29
CDH8-205ENST00000577730 ZEB1P37275 1124 aaPredicted RBP6.93□□□□□ -1.3
CDH8-205ENST00000577730 PCGF6Q9BYE7 350 aa6.91□□□□□ -1.3
CDH8-205ENST00000577730 CCER1Q8TC90 406 aaPredicted RBP6.91□□□□□ -1.3
CDH8-205ENST00000577730 HRCP23327 699 aa6.91□□□□□ -1.3
CDH8-205ENST00000577730 SUPT5HO00267 1087 aaKnown RBP6.79□□□□□ -1.32
CDH8-205ENST00000577730 YTHDC1Q96MU7 727 aaKnown RBP6.71□□□□□ -1.33
CDH8-205ENST00000577730 NEFLP07196 543 aa6.69□□□□□ -1.34
CDH8-205ENST00000577730 PPARGC1BQ86YN6 1023 aaKnown RBP6.66□□□□□ -1.34
CDH8-205ENST00000577730 GTF3C3Q9Y5Q9 886 aa6.63□□□□□ -1.35
CDH8-205ENST00000577730 RTL5Q5HYW3 569 aaPredicted RBP6.59□□□□□ -1.35
CDH8-205ENST00000577730 ACIN1Q9UKV3 1341 aaKnown RBP6.58□□□□□ -1.36
CDH8-205ENST00000577730 TRIM26Q12899 539 aaPredicted RBP6.57□□□□□ -1.36
CDH8-205ENST00000577730 DCAF8L2P0C7V8 631 aa6.53□□□□□ -1.36
CDH8-205ENST00000577730 BCL11AQ9H165 835 aa6.51□□□□□ -1.37
CDH8-205ENST00000577730 SCAF1Q9H7N4 1312 aaKnown RBP6.51□□□□□ -1.37
CDH8-205ENST00000577730 GLIPR1L2Q4G1C9 344 aa6.51□□□□□ -1.37
CDH8-205ENST00000577730 MYT1LQ9UL68 1186 aa6.5□□□□□ -1.37
CDH8-205ENST00000577730 EHMT2Q96KQ7 1210 aa6.49□□□□□ -1.37
CDH8-205ENST00000577730 DIEXFQ68CQ4 756 aaKnown RBP6.49□□□□□ -1.37
CDH8-205ENST00000577730 SHROOM4Q9ULL8 1493 aa6.47□□□□□ -1.37
CDH8-205ENST00000577730 EIF5BO60841 1220 aaKnown RBP6.46□□□□□ -1.38
CDH8-205ENST00000577730 DAXXQ9UER7 740 aaPredicted RBP6.46□□□□□ -1.38
CDH8-205ENST00000577730 APLP2Q06481 763 aa6.46□□□□□ -1.38
CDH8-205ENST00000577730 ANP32EQ9BTT0 268 aa6.45□□□□□ -1.38
CDH8-205ENST00000577730 CLSPNQ9HAW4 1339 aa6.41□□□□□ -1.38
CDH8-205ENST00000577730 FAM9AQ8IZU1 332 aaPredicted RBP6.38□□□□□ -1.39
CDH8-205ENST00000577730 NEUROD1Q13562 356 aa6.38□□□□□ -1.39
CDH8-205ENST00000577730 BCANQ96GW7 911 aa6.37□□□□□ -1.39
CDH8-205ENST00000577730 CDK11AQ9UQ88 783 aaPredicted RBP6.36□□□□□ -1.39
CDH8-205ENST00000577730 ZNF316A6NFI3 1004 aaPredicted RBP6.34□□□□□ -1.39
CDH8-205ENST00000577730 PRKCSHP14314 528 aaPredicted RBP6.29□□□□□ -1.4
CDH8-205ENST00000577730 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.27□□□□□ -1.41
CDH8-205ENST00000577730 NISCHQ9Y2I1 1504 aa6.27□□□□□ -1.41
CDH8-205ENST00000577730 ANP32AP39687 249 aaKnown RBP6.27□□□□□ -1.41
CDH8-205ENST00000577730 TRIM41Q8WV44 630 aa6.26□□□□□ -1.41
CDH8-205ENST00000577730 CHIC1Q5VXU3 224 aa6.25□□□□□ -1.41
CDH8-205ENST00000577730 SLC24A1O60721 1099 aa6.21□□□□□ -1.41
CDH8-205ENST00000577730 LOC105371045A0A1W2PR82 267 aa6.21□□□□□ -1.42
CDH8-205ENST00000577730 RANGAP1P46060 587 aaPredicted RBP6.21□□□□□ -1.42
CDH8-205ENST00000577730 NBR1Q14596 966 aa6.21□□□□□ -1.42
CDH8-205ENST00000577730 FKBP8Q14318 412 aa6.2□□□□□ -1.42
CDH8-205ENST00000577730 CSRNP3Q8WYN3 585 aa6.2□□□□□ -1.42
CDH8-205ENST00000577730 ERICH6BQ5W0A0 696 aa6.16□□□□□ -1.42
CDH8-205ENST00000577730 ZBTB47Q9UFB7 747 aaPredicted RBP6.16□□□□□ -1.42
CDH8-205ENST00000577730 DEKP35659 375 aaKnown RBP6.15□□□□□ -1.42
CDH8-205ENST00000577730 RTN4Q9NQC3 1192 aaKnown RBP6.15□□□□□ -1.43
CDH8-205ENST00000577730 NPM2Q86SE8 214 aaKnown RBP6.12□□□□□ -1.43
CDH8-205ENST00000577730 HNRNPUL2Q1KMD3 747 aaKnown RBP6.12□□□□□ -1.43
CDH8-205ENST00000577730 TNNT2P45379 298 aaPredicted RBP6.12□□□□□ -1.43
CDH8-205ENST00000577730 NEFMP07197 916 aa6.11□□□□□ -1.43
CDH8-205ENST00000577730 ANP32CO43423 234 aa6.11□□□□□ -1.43
CDH8-205ENST00000577730 UBTFP17480 764 aaKnown RBP6.11□□□□□ -1.43
CDH8-205ENST00000577730 ANP32BQ92688 251 aaKnown RBP6.1□□□□□ -1.43
CDH8-205ENST00000577730 DCAF1Q9Y4B6 1507 aa6.1□□□□□ -1.43
CDH8-205ENST00000577730 SUPT16HQ9Y5B9 1047 aaKnown RBP6.08□□□□□ -1.44
CDH8-205ENST00000577730 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.08□□□□□ -1.44
CDH8-205ENST00000577730 NAP1L5Q96NT1 182 aaPredicted RBP6.07□□□□□ -1.44
CDH8-205ENST00000577730 NCLP19338 710 aaKnown RBP6.07□□□□□ -1.44
CDH8-205ENST00000577730 PKNOX2Q96KN3 472 aa6.07□□□□□ -1.44
CDH8-205ENST00000577730 CDK11BP21127 795 aaKnown RBP6.06□□□□□ -1.44
CDH8-205ENST00000577730 MIER1Q8N108 512 aa6.06□□□□□ -1.44
CDH8-205ENST00000577730 PPM1GO15355 546 aaPredicted RBP6.06□□□□□ -1.44
CDH8-205ENST00000577730 PODXL2Q9NZ53 605 aa6.06□□□□□ -1.44
CDH8-205ENST00000577730 NOP58Q9Y2X3 529 aaKnown RBP6.06□□□□□ -1.44
CDH8-205ENST00000577730 TSHZ2Q9NRE2 1034 aa6.05□□□□□ -1.44
CDH8-205ENST00000577730 CCDC136Q96JN2 1154 aa6.05□□□□□ -1.44
CDH8-205ENST00000577730 RBM19Q9Y4C8 960 aaKnown RBP6.04□□□□□ -1.44
CDH8-205ENST00000577730 ITGAEP38570 1179 aa6.03□□□□□ -1.44
CDH8-205ENST00000577730 TRIM44Q96DX7 344 aaPredicted RBP6.03□□□□□ -1.44
CDH8-205ENST00000577730 VSIG10Q8N0Z9 540 aa6.03□□□□□ -1.44
CDH8-205ENST00000577730 HSP90AA1P07900 732 aaKnown RBP6.02□□□□□ -1.45
CDH8-205ENST00000577730 RSPH6AQ9H0K4 717 aa6.01□□□□□ -1.45
CDH8-205ENST00000577730 DDRGK1Q96HY6 314 aa6.01□□□□□ -1.45
CDH8-205ENST00000577730 POLR3GLQ9BT43 218 aa6□□□□□ -1.45
CDH8-205ENST00000577730 ANO8Q9HCE9 1232 aaPredicted RBP5.99□□□□□ -1.45
CDH8-205ENST00000577730 ARXQ96QS3 562 aa5.98□□□□□ -1.45
CDH8-205ENST00000577730 HNRNPUQ00839 825 aaKnown RBP eCLIP5.97□□□□□ -1.45
CDH8-205ENST00000577730 CNGB1Q14028 1251 aaPredicted RBP5.97□□□□□ -1.45
CDH8-205ENST00000577730 LAS1LQ9Y4W2 734 aaKnown RBP5.96□□□□□ -1.46
CDH8-205ENST00000577730 HSP90AA2PQ14568 343 aaPredicted RBP5.95□□□□□ -1.46
CDH8-205ENST00000577730 TRIM52Q96A61 297 aa5.95□□□□□ -1.46
CDH8-205ENST00000577730 A0A0U1RQG5 324 aaPredicted RBP5.94□□□□□ -1.46
CDH8-205ENST00000577730 UBE2Q2Q8WVN8 375 aa5.94□□□□□ -1.46
CDH8-205ENST00000577730 UPF2Q9HAU5 1272 aaKnown RBP5.94□□□□□ -1.46
CDH8-205ENST00000577730 L1TD1Q5T7N2 865 aaKnown RBP5.94□□□□□ -1.46
CDH8-205ENST00000577730 PNNQ9H307 717 aaKnown RBP5.94□□□□□ -1.46
CDH8-205ENST00000577730 IRX6P78412 446 aaPredicted RBP5.93□□□□□ -1.46
CDH8-205ENST00000577730 ATP1B4Q9UN42 357 aaPredicted RBP5.93□□□□□ -1.46
CDH8-205ENST00000577730 ZNF326Q5BKZ1 582 aaKnown RBP5.93□□□□□ -1.46
CDH8-205ENST00000577730 PPP4R2Q9NY27 417 aa5.92□□□□□ -1.46
CDH8-205ENST00000577730 AMER1Q5JTC6 1135 aaPredicted RBP5.92□□□□□ -1.46
CDH8-205ENST00000577730 SALL2Q9Y467 1007 aaPredicted RBP5.91□□□□□ -1.46
CDH8-205ENST00000577730 BECN1Q14457 450 aa5.9□□□□□ -1.46
CDH8-205ENST00000577730 CCDC180Q9P1Z9 1646 aa5.9□□□□□ -1.47
CDH8-205ENST00000577730 DDX10Q13206 875 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms