RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 PCOTHQ58A44 107 aa2.64□□□□□ -1.99
CDC27-215ENST00000573550 HECTD4Q9Y4D8 3996 aa2.64□□□□□ -1.99
CDC27-215ENST00000573550 A6NED7 52 aa2.63□□□□□ -1.99
CDC27-215ENST00000573550 ACYP2P14621 99 aa2.63□□□□□ -1.99
CDC27-215ENST00000573550 RPS29P62273 56 aaKnown RBP2.63□□□□□ -1.99
CDC27-215ENST00000573550 KTN1-AS1Q86SY8 53 aa2.63□□□□□ -1.99
CDC27-215ENST00000573550 LINC00313P59037 77 aa2.62□□□□□ -1.99
CDC27-215ENST00000573550 DNAH6Q9C0G6 4158 aa2.62□□□□□ -1.99
CDC27-215ENST00000573550 PLECQ15149 4684 aaKnown RBP2.61□□□□□ -1.99
CDC27-215ENST00000573550 A6NN06 94 aa2.61□□□□□ -1.99
CDC27-215ENST00000573550 Q5W150 140 aa2.61□□□□□ -1.99
CDC27-215ENST00000573550 LCA10Q71F78 164 aa2.61□□□□□ -1.99
CDC27-215ENST00000573550 CIRBP-AS1Q8TBR5 109 aa2.61□□□□□ -1.99
CDC27-215ENST00000573550 TGP01266 2768 aa2.61□□□□□ -1.99
CDC27-215ENST00000573550 DNAH17Q9UFH2 4485 aa2.6□□□□□ -1.99
CDC27-215ENST00000573550 SPAG11AQ6PDA7 123 aa2.6□□□□□ -1.99
CDC27-215ENST00000573550 STARD9Q9P2P6 4700 aa2.6□□□□□ -1.99
CDC27-215ENST00000573550 SPINK1P00995 79 aa2.59□□□□□ -1.99
CDC27-215ENST00000573550 KRTAP13-2Q52LG2 175 aa2.59□□□□□ -1.99
CDC27-215ENST00000573550 SPINK6Q6UWN8 80 aa2.59□□□□□ -1.99
CDC27-215ENST00000573550 SEC61GP60059 68 aa2.58□□□□□ -2
CDC27-215ENST00000573550 C7orf65Q6ZTY9 151 aa2.58□□□□□ -2
CDC27-215ENST00000573550 ALMS1Q8TCU4 4167 aa2.57□□□□□ -2
CDC27-215ENST00000573550 DNAH8Q96JB1 4490 aa2.57□□□□□ -2
CDC27-215ENST00000573550 LY6G6CO95867 125 aa2.56□□□□□ -2
CDC27-215ENST00000573550 SPINK7P58062 85 aa2.56□□□□□ -2
CDC27-215ENST00000573550 SPTSSBQ8NFR3 76 aa2.56□□□□□ -2
CDC27-215ENST00000573550 DNAH2Q9P225 4427 aa2.55□□□□□ -2
CDC27-215ENST00000573550 A0A1B0GU69 56 aa2.55□□□□□ -2
CDC27-215ENST00000573550 SPATA8Q6RVD6 105 aa2.55□□□□□ -2
CDC27-215ENST00000573550 UQCR11O14957 56 aa2.54□□□□□ -2
CDC27-215ENST00000573550 KRTAP21-3Q3LHN1 58 aa2.54□□□□□ -2
CDC27-215ENST00000573550 KMT2AQ03164 3969 aa2.54□□□□□ -2
CDC27-215ENST00000573550 FRAS1Q86XX4 4008 aa2.53□□□□□ -2
CDC27-215ENST00000573550 CAMK2N1Q7Z7J9 78 aa2.53□□□□□ -2
CDC27-215ENST00000573550 LINC00304Q8N9R0 145 aa2.52□□□□□ -2.01
CDC27-215ENST00000573550 C20orf166-AS1Q96NR2 134 aa2.52□□□□□ -2.01
CDC27-215ENST00000573550 A8MUU9 505 aa2.51□□□□□ -2.01
CDC27-215ENST00000573550 MIR22HGQ0VDD5 57 aa2.51□□□□□ -2.01
CDC27-215ENST00000573550 RBM12B-AS1Q9P1G2 102 aa2.51□□□□□ -2.01
CDC27-215ENST00000573550 DNAH5Q8TE73 4624 aa2.5□□□□□ -2.01
CDC27-215ENST00000573550 PKD1P98161 4303 aa2.5□□□□□ -2.01
CDC27-215ENST00000573550 DNAH11Q96DT5 4516 aa2.49□□□□□ -2.01
CDC27-215ENST00000573550 FAT2Q9NYQ8 4349 aa2.48□□□□□ -2.01
CDC27-215ENST00000573550 KRTAP10-4P60372 401 aaPredicted RBP2.46□□□□□ -2.02
CDC27-215ENST00000573550 LRP1BQ9NZR2 4599 aa2.46□□□□□ -2.02
CDC27-215ENST00000573550 VPS13BQ7Z7G8 4022 aa2.45□□□□□ -2.02
CDC27-215ENST00000573550 RETNLBQ9BQ08 111 aa2.45□□□□□ -2.02
CDC27-215ENST00000573550 COX6B2Q6YFQ2 88 aa2.43□□□□□ -2.02
CDC27-215ENST00000573550 PKHD1L1Q86WI1 4243 aa2.43□□□□□ -2.02
CDC27-215ENST00000573550 H0YAA0 97 aa2.42□□□□□ -2.02
CDC27-215ENST00000573550 LINC01554Q52M75 96 aa2.42□□□□□ -2.02
CDC27-215ENST00000573550 SACSQ9NZJ4 4579 aa2.42□□□□□ -2.02
CDC27-215ENST00000573550 DNHD1Q96M86 4753 aa2.41□□□□□ -2.02
CDC27-215ENST00000573550 FLG2Q5D862 2391 aaPredicted RBP2.41□□□□□ -2.02
CDC27-215ENST00000573550 A0A1B0GU33 70 aa2.41□□□□□ -2.02
CDC27-215ENST00000573550 H1FX-AS1Q4G0G2 97 aa2.41□□□□□ -2.02
CDC27-215ENST00000573550 PKHD1P08F94 4074 aa2.4□□□□□ -2.02
CDC27-215ENST00000573550 APOBP04114 4563 aaKnown RBP2.38□□□□□ -2.03
CDC27-215ENST00000573550 C9orf92A6NGG3 77 aa2.38□□□□□ -2.03
CDC27-215ENST00000573550 K7ERS5 55 aa2.38□□□□□ -2.03
CDC27-215ENST00000573550 RPL37P61927 97 aaKnown RBP2.37□□□□□ -2.03
CDC27-215ENST00000573550 ADM2Q7Z4H4 148 aa2.36□□□□□ -2.03
CDC27-215ENST00000573550 DYNC1H1Q14204 4646 aaKnown RBP2.35□□□□□ -2.03
CDC27-215ENST00000573550 SMR3BP02814 79 aaPredicted RBP2.35□□□□□ -2.03
CDC27-215ENST00000573550 KRTAP25-1Q3LHN0 102 aa2.35□□□□□ -2.03
CDC27-215ENST00000573550 CSAG1Q6PB30 78 aa2.35□□□□□ -2.03
CDC27-215ENST00000573550 KRTAP5-7Q6L8G8 165 aa2.33□□□□□ -2.04
CDC27-215ENST00000573550 S4R3F8 94 aa2.32□□□□□ -2.04
CDC27-215ENST00000573550 HYDINQ4G0P3 5121 aa2.32□□□□□ -2.04
CDC27-215ENST00000573550 ROMO1P60602 79 aa2.31□□□□□ -2.04
CDC27-215ENST00000573550 Q5VSD8 79 aa2.31□□□□□ -2.04
CDC27-215ENST00000573550 TNXBP22105 4242 aa2.31□□□□□ -2.04
CDC27-215ENST00000573550 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
CDC27-215ENST00000573550 TPRXLQ17RH7 258 aa2.3□□□□□ -2.04
CDC27-215ENST00000573550 FAT1Q14517 4588 aa2.28□□□□□ -2.04
CDC27-215ENST00000573550 DMBT1Q9UGM3 2413 aaPredicted RBP2.27□□□□□ -2.05
CDC27-215ENST00000573550 M0QZ58 72 aa2.27□□□□□ -2.05
CDC27-215ENST00000573550 MT1HL1P0DM35 61 aa2.26□□□□□ -2.05
CDC27-215ENST00000573550 FAT3Q8TDW7 4589 aa2.26□□□□□ -2.05
CDC27-215ENST00000573550 RYR2Q92736 4967 aa2.26□□□□□ -2.05
CDC27-215ENST00000573550 KRTAP13-4Q3LI77 160 aa2.25□□□□□ -2.05
CDC27-215ENST00000573550 HSPG2P98160 4391 aa2.24□□□□□ -2.05
CDC27-215ENST00000573550 LRP1Q07954 4544 aaKnown RBP2.23□□□□□ -2.05
CDC27-215ENST00000573550 P0C880 135 aa2.23□□□□□ -2.05
CDC27-215ENST00000573550 KRTAP12-1P59990 96 aa2.21□□□□□ -2.06
CDC27-215ENST00000573550 A0A0D9SG42 100 aa2.2□□□□□ -2.06
CDC27-215ENST00000573550 CRIPTQ9P021 101 aa2.2□□□□□ -2.06
CDC27-215ENST00000573550 KMT2CQ8NEZ4 4911 aaKnown RBP2.2□□□□□ -2.06
CDC27-215ENST00000573550 KRTAP5-8O75690 187 aa2.18□□□□□ -2.06
CDC27-215ENST00000573550 RYR1P21817 5038 aa2.17□□□□□ -2.06
CDC27-215ENST00000573550 MYCBP2O75592 4640 aa2.16□□□□□ -2.06
CDC27-215ENST00000573550 R4GN34 69 aa2.14□□□□□ -2.07
CDC27-215ENST00000573550 SPINT4Q6UDR6 99 aa2.13□□□□□ -2.07
CDC27-215ENST00000573550 RYR3Q15413 4870 aa2.11□□□□□ -2.07
CDC27-215ENST00000573550 C10orf95Q9H7T3 257 aa2.11□□□□□ -2.07
CDC27-215ENST00000573550 KRTAP19-2Q3LHN2 52 aa2.1□□□□□ -2.07
CDC27-215ENST00000573550 LRP2P98164 4655 aa2.09□□□□□ -2.07
CDC27-215ENST00000573550 KIAA1109Q2LD37 5005 aa2.09□□□□□ -2.07
CDC27-215ENST00000573550 KRTAP12-3P60328 96 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms