RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 AEBP2Q6ZN18 517 aaPredicted RBP26.29■■□□□ 1.8
CDC27-215ENST00000573550 CHIC1Q5VXU3 224 aa25.62■■□□□ 1.69
CDC27-215ENST00000573550 PHF23Q9BUL5 403 aaPredicted RBP22.55■■□□□ 1.2
CDC27-215ENST00000573550 SENP3Q9H4L4 574 aaPredicted RBP22.27■■□□□ 1.16
CDC27-215ENST00000573550 PLPPR3Q6T4P5 718 aa20.76■□□□□ 0.91
CDC27-215ENST00000573550 FOXD1Q16676 465 aa20.7■□□□□ 0.9
CDC27-215ENST00000573550 PPP6R1Q9UPN7 881 aa19.9■□□□□ 0.78
CDC27-215ENST00000573550 ADRA2BP18089 450 aa19.85■□□□□ 0.77
CDC27-215ENST00000573550 PIAS4Q8N2W9 510 aaPredicted RBP19.49■□□□□ 0.71
CDC27-215ENST00000573550 MSH5O43196 834 aa19.07■□□□□ 0.64
CDC27-215ENST00000573550 PPP4R3CPQ6ZMV5 832 aa18.3■□□□□ 0.52
CDC27-215ENST00000573550 SCAF1Q9H7N4 1312 aaKnown RBP18.11■□□□□ 0.49
CDC27-215ENST00000573550 MAPK8IP2Q13387 824 aaPredicted RBP18.03■□□□□ 0.48
CDC27-215ENST00000573550 KCNA4P22459 653 aa17.85■□□□□ 0.45
CDC27-215ENST00000573550 DMRT2Q9Y5R5 561 aa17.8■□□□□ 0.44
CDC27-215ENST00000573550 CNKSR2Q8WXI2 1034 aa17.78■□□□□ 0.44
CDC27-215ENST00000573550 NCBP3Q53F19 620 aaKnown RBP17.76■□□□□ 0.43
CDC27-215ENST00000573550 NPM3O75607 178 aaKnown RBP17.56■□□□□ 0.4
CDC27-215ENST00000573550 POTEDQ86YR6 584 aa17.46■□□□□ 0.39
CDC27-215ENST00000573550 RNF216Q9NWF9 866 aaPredicted RBP17.46■□□□□ 0.39
CDC27-215ENST00000573550 HOXD11P31277 338 aaPredicted RBP17.42■□□□□ 0.38
CDC27-215ENST00000573550 DNAJC5BQ9UF47 199 aa17.09■□□□□ 0.33
CDC27-215ENST00000573550 DCAF8L1A6NGE4 600 aa16.95■□□□□ 0.3
CDC27-215ENST00000573550 SLC4A1APQ9BWU0 796 aaKnown RBP16.95■□□□□ 0.3
CDC27-215ENST00000573550 SLC4A2P04920 1241 aa16.61■□□□□ 0.25
CDC27-215ENST00000573550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.53■□□□□ 0.241e-6■■□□□ 12.2
CDC27-215ENST00000573550 ZBTB22O15209 634 aa16.46■□□□□ 0.23
CDC27-215ENST00000573550 EHMT2Q96KQ7 1210 aa16.42■□□□□ 0.22
CDC27-215ENST00000573550 FOXD4L1Q9NU39 408 aa16.42■□□□□ 0.22
CDC27-215ENST00000573550 RNF39Q9H2S5 420 aa16.37■□□□□ 0.21
CDC27-215ENST00000573550 U3KPZ7 1027 aaPredicted RBP16.33■□□□□ 0.2
CDC27-215ENST00000573550 CSRNP3Q8WYN3 585 aa16.3■□□□□ 0.2
CDC27-215ENST00000573550 MYCNP04198 464 aaPredicted RBP16.21■□□□□ 0.19
CDC27-215ENST00000573550 C1QBPQ07021 282 aaKnown RBP16.14■□□□□ 0.17
CDC27-215ENST00000573550 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.05■□□□□ 0.16
CDC27-215ENST00000573550 HNRNPUL2Q1KMD3 747 aaKnown RBP16.05■□□□□ 0.16
CDC27-215ENST00000573550 SAMD1Q6SPF0 538 aaPredicted RBP16■□□□□ 0.15
CDC27-215ENST00000573550 CACNB1Q02641 598 aaPredicted RBP15.91■□□□□ 0.14
CDC27-215ENST00000573550 SPINK5Q9NQ38 1064 aaPredicted RBP15.88■□□□□ 0.13
CDC27-215ENST00000573550 APLP2Q06481 763 aa15.87■□□□□ 0.13
CDC27-215ENST00000573550 ATXN8OSP0DMR3 200 aa15.85■□□□□ 0.13
CDC27-215ENST00000573550 ATF5Q9Y2D1 282 aaPredicted RBP15.82■□□□□ 0.12
CDC27-215ENST00000573550 CAPN15O75808 1086 aa15.76■□□□□ 0.11
CDC27-215ENST00000573550 ZNF219Q9P2Y4 722 aaPredicted RBP15.69■□□□□ 0.1
CDC27-215ENST00000573550 TRHP20396 242 aaPredicted RBP15.68■□□□□ 0.1
CDC27-215ENST00000573550 DSG3P32926 999 aa15.56■□□□□ 0.08
CDC27-215ENST00000573550 ABCB7O75027 752 aa15.48■□□□□ 0.07
CDC27-215ENST00000573550 POLA2Q14181 598 aa15.44■□□□□ 0.06
CDC27-215ENST00000573550 ZBTB12Q9Y330 459 aaPredicted RBP15.17■□□□□ 0.02
CDC27-215ENST00000573550 MKRN4PQ13434 485 aaPredicted RBP15.13■□□□□ 0.01
CDC27-215ENST00000573550 FBLN2P98095 1184 aa15.08■□□□□ 0
CDC27-215ENST00000573550 OSCARQ8IYS5 282 aa14.94□□□□□ -0.02
CDC27-215ENST00000573550 RBM42Q9BTD8 480 aaKnown RBP14.79□□□□□ -0.04
CDC27-215ENST00000573550 SPDYE2BA6NHP3 402 aa14.77□□□□□ -0.05
CDC27-215ENST00000573550 SPDYE6P0CI01 402 aa14.77□□□□□ -0.05
CDC27-215ENST00000573550 SPDYE2Q495Y8 402 aa14.77□□□□□ -0.05
CDC27-215ENST00000573550 SPDYE4A6NLX3 237 aa14.73□□□□□ -0.05
CDC27-215ENST00000573550 FKBP8Q14318 412 aa14.7□□□□□ -0.06
CDC27-215ENST00000573550 ZNF692Q9BU19 519 aaPredicted RBP14.69□□□□□ -0.06
CDC27-215ENST00000573550 SSUH2Q9Y2M2 353 aa14.69□□□□□ -0.06
CDC27-215ENST00000573550 AKT1S1Q96B36 256 aa14.61□□□□□ -0.07
CDC27-215ENST00000573550 PROM2Q8N271 834 aa14.54□□□□□ -0.08
CDC27-215ENST00000573550 PABPN1Q86U42 306 aaKnown RBP eCLIP14.51□□□□□ -0.09
CDC27-215ENST00000573550 REM2Q8IYK8 340 aaPredicted RBP14.48□□□□□ -0.09
CDC27-215ENST00000573550 PITPNM1O00562 1244 aa14.33□□□□□ -0.12
CDC27-215ENST00000573550 SPDYE1Q8NFV5 336 aaPredicted RBP14.33□□□□□ -0.12
CDC27-215ENST00000573550 CLEC11AQ9Y240 323 aa14.25□□□□□ -0.13
CDC27-215ENST00000573550 STAG3Q9UJ98 1225 aa14.23□□□□□ -0.13
CDC27-215ENST00000573550 CHRDL2Q6WN34 429 aa14.21□□□□□ -0.13
CDC27-215ENST00000573550 FBXO3Q9UK99 471 aa14.17□□□□□ -0.14
CDC27-215ENST00000573550 PRR29P0C7W0 189 aa14.12□□□□□ -0.15
CDC27-215ENST00000573550 FXR2P51116 673 aaKnown RBP eCLIP14.07□□□□□ -0.16
CDC27-215ENST00000573550 PIP4P2Q8N4L2 257 aa14.03□□□□□ -0.16
CDC27-215ENST00000573550 VASPP50552 380 aaPredicted RBP14.02□□□□□ -0.17
CDC27-215ENST00000573550 CREBZFQ9NS37 354 aa13.98□□□□□ -0.17
CDC27-215ENST00000573550 PRKAR2AP13861 404 aaKnown RBP13.94□□□□□ -0.18
CDC27-215ENST00000573550 CHADLQ6NUI6 762 aa13.94□□□□□ -0.18
CDC27-215ENST00000573550 MIER1Q8N108 512 aa13.93□□□□□ -0.18
CDC27-215ENST00000573550 PLCD3Q8N3E9 789 aa13.9□□□□□ -0.18
CDC27-215ENST00000573550 MNX1P50219 401 aaPredicted RBP13.86□□□□□ -0.19
CDC27-215ENST00000573550 PLEKHG5O94827 1062 aa13.84□□□□□ -0.19
CDC27-215ENST00000573550 IFNLR1Q8IU57 520 aaPredicted RBP13.84□□□□□ -0.19
CDC27-215ENST00000573550 FARP1Q9Y4F1 1045 aaPredicted RBP13.81□□□□□ -0.2
CDC27-215ENST00000573550 POTEHQ6S545 545 aa13.8□□□□□ -0.2
CDC27-215ENST00000573550 ZBTB47Q9UFB7 747 aaPredicted RBP13.76□□□□□ -0.21
CDC27-215ENST00000573550 KLHL34Q8N239 644 aa13.72□□□□□ -0.21
CDC27-215ENST00000573550 NPM1P06748 294 aaKnown RBP eCLIP13.69□□□□□ -0.22
CDC27-215ENST00000573550 NUBP1P53384 320 aa13.64□□□□□ -0.23
CDC27-215ENST00000573550 SPOCK2Q92563 424 aa13.63□□□□□ -0.23
CDC27-215ENST00000573550 C19orf67A6NJJ6 358 aa13.59□□□□□ -0.23
CDC27-215ENST00000573550 RASEFQ8IZ41 740 aa13.59□□□□□ -0.23
CDC27-215ENST00000573550 HAX1O00165 279 aa13.54□□□□□ -0.24
CDC27-215ENST00000573550 CD44P16070 742 aaKnown RBP13.54□□□□□ -0.24
CDC27-215ENST00000573550 FAM212AQ96EL1 285 aa13.5□□□□□ -0.25
CDC27-215ENST00000573550 EVX2Q03828 476 aa13.49□□□□□ -0.25
CDC27-215ENST00000573550 TSPYL2Q9H2G4 693 aaPredicted RBP13.49□□□□□ -0.25
CDC27-215ENST00000573550 PAK3O75914 559 aaPredicted RBP13.46□□□□□ -0.25
CDC27-215ENST00000573550 ZRANB1Q9UGI0 708 aa13.45□□□□□ -0.26
CDC27-215ENST00000573550 DCAF8Q5TAQ9 597 aa13.44□□□□□ -0.26
CDC27-215ENST00000573550 GSE1Q14687 1217 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms