RNA–Protein interactions for RNA: ENST00000570279.1

CFDP1-210, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-210ENST00000570279 MGAM2Q2M2H8 2515 aa2.2□□□□□ -2.06
CFDP1-210ENST00000570279 CSAG1Q6PB30 78 aa2.19□□□□□ -2.06
CFDP1-210ENST00000570279 SRRM2Q9UQ35 2752 aaKnown RBP2.19□□□□□ -2.06
CFDP1-210ENST00000570279 COL6A5A8TX70 2615 aa2.19□□□□□ -2.06
CFDP1-210ENST00000570279 H0YAA0 97 aa2.18□□□□□ -2.06
CFDP1-210ENST00000570279 KRTAP25-1Q3LHN0 102 aa2.18□□□□□ -2.06
CFDP1-210ENST00000570279 ADM2Q7Z4H4 148 aa2.18□□□□□ -2.06
CFDP1-210ENST00000570279 TENM2Q9NT68 2774 aa2.18□□□□□ -2.06
CFDP1-210ENST00000570279 OBSCNQ5VST9 7968 aa2.16□□□□□ -2.06
CFDP1-210ENST00000570279 TRRAPQ9Y4A5 3859 aa2.15□□□□□ -2.06
CFDP1-210ENST00000570279 KRTAP10-4P60372 401 aaPredicted RBP2.15□□□□□ -2.07
CFDP1-210ENST00000570279 C9orf92A6NGG3 77 aa2.14□□□□□ -2.07
CFDP1-210ENST00000570279 ROMO1P60602 79 aa2.14□□□□□ -2.07
CFDP1-210ENST00000570279 RPL37P61927 97 aaKnown RBP2.14□□□□□ -2.07
CFDP1-210ENST00000570279 LCE3EQ5T5B0 92 aa2.14□□□□□ -2.07
CFDP1-210ENST00000570279 DNAH1Q9P2D7 4330 aa2.13□□□□□ -2.07
CFDP1-210ENST00000570279 COL7A1Q02388 2944 aa2.13□□□□□ -2.07
CFDP1-210ENST00000570279 MEGF8Q7Z7M0 2845 aa2.13□□□□□ -2.07
CFDP1-210ENST00000570279 DNAH3Q8TD57 4116 aa2.12□□□□□ -2.07
CFDP1-210ENST00000570279 KRTAP10-8P60410 259 aa2.11□□□□□ -2.07
CFDP1-210ENST00000570279 KRTAP4-3Q9BYR4 195 aa2.11□□□□□ -2.07
CFDP1-210ENST00000570279 FBN3Q75N90 2809 aa2.1□□□□□ -2.07
CFDP1-210ENST00000570279 SMR3BP02814 79 aaPredicted RBP2.1□□□□□ -2.07
CFDP1-210ENST00000570279 S4R3F8 94 aa2.1□□□□□ -2.07
CFDP1-210ENST00000570279 KRTAP12-2P59991 146 aa2.09□□□□□ -2.07
CFDP1-210ENST00000570279 HUWE1Q7Z6Z7 4374 aaKnown RBP2.09□□□□□ -2.07
CFDP1-210ENST00000570279 M0QZ58 72 aa2.08□□□□□ -2.08
CFDP1-210ENST00000570279 CRIPTQ9P021 101 aa2.06□□□□□ -2.08
CFDP1-210ENST00000570279 ANK2Q01484 3957 aa2.06□□□□□ -2.08
CFDP1-210ENST00000570279 DYNC2H1Q8NCM8 4307 aaKnown RBP2.05□□□□□ -2.08
CFDP1-210ENST00000570279 TGP01266 2768 aa2.04□□□□□ -2.08
CFDP1-210ENST00000570279 TPRXLQ17RH7 258 aa2.04□□□□□ -2.08
CFDP1-210ENST00000570279 KRTAP13-4Q3LI77 160 aa2.04□□□□□ -2.08
CFDP1-210ENST00000570279 Q5VSD8 79 aa2.03□□□□□ -2.08
CFDP1-210ENST00000570279 DNAH10Q8IVF4 4471 aa2.03□□□□□ -2.09
CFDP1-210ENST00000570279 A0A0D9SG42 100 aa2.02□□□□□ -2.09
CFDP1-210ENST00000570279 CSMD3Q7Z407 3707 aa2.02□□□□□ -2.09
CFDP1-210ENST00000570279 DNAH9Q9NYC9 4486 aa2.01□□□□□ -2.09
CFDP1-210ENST00000570279 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
CFDP1-210ENST00000570279 P0C880 135 aa2.01□□□□□ -2.09
CFDP1-210ENST00000570279 KRTAP12-1P59990 96 aa2.01□□□□□ -2.09
CFDP1-210ENST00000570279 SPINT4Q6UDR6 99 aa2.01□□□□□ -2.09
CFDP1-210ENST00000570279 VPS13DQ5THJ4 4388 aa2.01□□□□□ -2.09
CFDP1-210ENST00000570279 LYSTQ99698 3801 aa2□□□□□ -2.09
CFDP1-210ENST00000570279 MT1HL1P0DM35 61 aa1.98□□□□□ -2.09
CFDP1-210ENST00000570279 LCE3AQ5TA76 89 aa1.98□□□□□ -2.09
CFDP1-210ENST00000570279 STARD9Q9P2P6 4700 aa1.97□□□□□ -2.09
CFDP1-210ENST00000570279 DNAH8Q96JB1 4490 aa1.97□□□□□ -2.09
CFDP1-210ENST00000570279 DNAH17Q9UFH2 4485 aa1.97□□□□□ -2.09
CFDP1-210ENST00000570279 PLECQ15149 4684 aaKnown RBP1.97□□□□□ -2.09
CFDP1-210ENST00000570279 ALMS1Q8TCU4 4167 aa1.96□□□□□ -2.1
CFDP1-210ENST00000570279 PP632Q6XCG6 107 aa1.96□□□□□ -2.1
CFDP1-210ENST00000570279 CMYA5Q8N3K9 4069 aa1.95□□□□□ -2.1
CFDP1-210ENST00000570279 PRKDCP78527 4128 aaKnown RBP1.95□□□□□ -2.1
CFDP1-210ENST00000570279 R4GN34 69 aa1.95□□□□□ -2.1
CFDP1-210ENST00000570279 FLG2Q5D862 2391 aaPredicted RBP1.95□□□□□ -2.1
CFDP1-210ENST00000570279 LRP1BQ9NZR2 4599 aa1.95□□□□□ -2.1
CFDP1-210ENST00000570279 DNAH7Q8WXX0 4024 aa1.94□□□□□ -2.1
CFDP1-210ENST00000570279 C10orf95Q9H7T3 257 aa1.94□□□□□ -2.1
CFDP1-210ENST00000570279 HECTD4Q9Y4D8 3996 aa1.91□□□□□ -2.1
CFDP1-210ENST00000570279 DNAH2Q9P225 4427 aa1.9□□□□□ -2.11
CFDP1-210ENST00000570279 PLAC4Q8WY50 150 aa1.89□□□□□ -2.11
CFDP1-210ENST00000570279 PKD1P98161 4303 aa1.89□□□□□ -2.11
CFDP1-210ENST00000570279 DNAH6Q9C0G6 4158 aa1.88□□□□□ -2.11
CFDP1-210ENST00000570279 CAMK2N1Q7Z7J9 78 aa1.88□□□□□ -2.11
CFDP1-210ENST00000570279 KMT2AQ03164 3969 aa1.87□□□□□ -2.11
CFDP1-210ENST00000570279 DNAH11Q96DT5 4516 aa1.87□□□□□ -2.11
CFDP1-210ENST00000570279 LUZP6Q538Z0 58 aa1.86□□□□□ -2.11
CFDP1-210ENST00000570279 HMCN1Q96RW7 5635 aa1.86□□□□□ -2.11
CFDP1-210ENST00000570279 SACSQ9NZJ4 4579 aa1.86□□□□□ -2.11
CFDP1-210ENST00000570279 DNAH5Q8TE73 4624 aa1.85□□□□□ -2.11
CFDP1-210ENST00000570279 DMBT1Q9UGM3 2413 aaPredicted RBP1.85□□□□□ -2.11
CFDP1-210ENST00000570279 FRAS1Q86XX4 4008 aa1.84□□□□□ -2.11
CFDP1-210ENST00000570279 FAT2Q9NYQ8 4349 aa1.84□□□□□ -2.11
CFDP1-210ENST00000570279 TNP1P09430 55 aa1.83□□□□□ -2.12
CFDP1-210ENST00000570279 KRTAP19-2Q3LHN2 52 aa1.83□□□□□ -2.12
CFDP1-210ENST00000570279 KRTAP5-5Q701N2 237 aaPredicted RBP1.82□□□□□ -2.12
CFDP1-210ENST00000570279 PKHD1P08F94 4074 aa1.82□□□□□ -2.12
CFDP1-210ENST00000570279 VPS13BQ7Z7G8 4022 aa1.82□□□□□ -2.12
CFDP1-210ENST00000570279 PKHD1L1Q86WI1 4243 aa1.8□□□□□ -2.12
CFDP1-210ENST00000570279 KRTAP4-1Q9BYQ7 146 aa1.8□□□□□ -2.12
CFDP1-210ENST00000570279 DNHD1Q96M86 4753 aa1.8□□□□□ -2.12
CFDP1-210ENST00000570279 DYNC1H1Q14204 4646 aaKnown RBP1.8□□□□□ -2.12
CFDP1-210ENST00000570279 SPRR5A0A1B0GTR4 108 aa1.79□□□□□ -2.12
CFDP1-210ENST00000570279 APOBP04114 4563 aaKnown RBP1.78□□□□□ -2.12
CFDP1-210ENST00000570279 SPRR2GQ9BYE4 73 aa1.77□□□□□ -2.13
CFDP1-210ENST00000570279 HYDINQ4G0P3 5121 aa1.77□□□□□ -2.13
CFDP1-210ENST00000570279 FAT3Q8TDW7 4589 aa1.75□□□□□ -2.13
CFDP1-210ENST00000570279 RYR2Q92736 4967 aa1.74□□□□□ -2.13
CFDP1-210ENST00000570279 LRP1Q07954 4544 aaKnown RBP1.74□□□□□ -2.13
CFDP1-210ENST00000570279 LCE3DQ9BYE3 92 aa1.73□□□□□ -2.13
CFDP1-210ENST00000570279 FAT1Q14517 4588 aa1.73□□□□□ -2.13
CFDP1-210ENST00000570279 LCE1CQ5T751 118 aa1.71□□□□□ -2.14
CFDP1-210ENST00000570279 LCE1BQ5T7P3 118 aa1.71□□□□□ -2.14
CFDP1-210ENST00000570279 RYR1P21817 5038 aa1.7□□□□□ -2.14
CFDP1-210ENST00000570279 TNXBP22105 4242 aa1.7□□□□□ -2.14
CFDP1-210ENST00000570279 KRTAP19-8Q3LI54 63 aa1.69□□□□□ -2.14
CFDP1-210ENST00000570279 KRTAP8-1Q8IUC2 63 aa1.69□□□□□ -2.14
CFDP1-210ENST00000570279 INE1O15225 51 aa1.67□□□□□ -2.14
CFDP1-210ENST00000570279 HSPG2P98160 4391 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms