RNA–Protein interactions for RNA: ENST00000570001.5

PDXDC1-217, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 4,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-217ENST00000570001 TPRXLQ17RH7 258 aa6.06□□□□□ -1.44
PDXDC1-217ENST00000570001 PKHD1P08F94 4074 aa6.05□□□□□ -1.44
PDXDC1-217ENST00000570001 PKD1P98161 4303 aa6.04□□□□□ -1.44
PDXDC1-217ENST00000570001 KRTAP3-1Q9BYR8 98 aa6.02□□□□□ -1.45
PDXDC1-217ENST00000570001 MT1HL1P0DM35 61 aa6.01□□□□□ -1.45
PDXDC1-217ENST00000570001 PRAC1Q96KF2 57 aa6□□□□□ -1.45
PDXDC1-217ENST00000570001 RYR2Q92736 4967 aa5.99□□□□□ -1.45
PDXDC1-217ENST00000570001 ADM2Q7Z4H4 148 aa5.98□□□□□ -1.45
PDXDC1-217ENST00000570001 M0QZ58 72 aa5.98□□□□□ -1.45
PDXDC1-217ENST00000570001 APOBP04114 4563 aaKnown RBP5.96□□□□□ -1.46
PDXDC1-217ENST00000570001 H3BS24 57 aa5.96□□□□□ -1.46
PDXDC1-217ENST00000570001 H0YAA0 97 aa5.93□□□□□ -1.46
PDXDC1-217ENST00000570001 PLAC4Q8WY50 150 aa5.89□□□□□ -1.47
PDXDC1-217ENST00000570001 KMT2CQ8NEZ4 4911 aaKnown RBP5.89□□□□□ -1.47
PDXDC1-217ENST00000570001 KRTAP4-5Q9BYR2 181 aa5.87□□□□□ -1.47
PDXDC1-217ENST00000570001 KIAA1109Q2LD37 5005 aa5.84□□□□□ -1.47
PDXDC1-217ENST00000570001 RYR3Q15413 4870 aa5.83□□□□□ -1.48
PDXDC1-217ENST00000570001 LRP1Q07954 4544 aaKnown RBP5.82□□□□□ -1.48
PDXDC1-217ENST00000570001 ROMO1P60602 79 aa5.82□□□□□ -1.48
PDXDC1-217ENST00000570001 RYR1P21817 5038 aa5.81□□□□□ -1.48
PDXDC1-217ENST00000570001 P0C880 135 aa5.81□□□□□ -1.48
PDXDC1-217ENST00000570001 LUZP6Q538Z0 58 aa5.81□□□□□ -1.48
PDXDC1-217ENST00000570001 KRTAP17-1Q9BYP8 105 aa5.78□□□□□ -1.48
PDXDC1-217ENST00000570001 HSPG2P98160 4391 aa5.75□□□□□ -1.49
PDXDC1-217ENST00000570001 KRTAP3-3Q9BYR6 98 aa5.74□□□□□ -1.49
PDXDC1-217ENST00000570001 MYCBP2O75592 4640 aa5.73□□□□□ -1.49
PDXDC1-217ENST00000570001 KRTAP10-6P60371 365 aaPredicted RBP5.71□□□□□ -1.49
PDXDC1-217ENST00000570001 FAT3Q8TDW7 4589 aa5.69□□□□□ -1.5
PDXDC1-217ENST00000570001 PKHD1L1Q86WI1 4243 aa5.68□□□□□ -1.5
PDXDC1-217ENST00000570001 KRTAP25-1Q3LHN0 102 aa5.68□□□□□ -1.5
PDXDC1-217ENST00000570001 KRTAP13-4Q3LI77 160 aa5.64□□□□□ -1.51
PDXDC1-217ENST00000570001 A0A0A0MQY5 61 aa5.64□□□□□ -1.51
PDXDC1-217ENST00000570001 KRTAP3-2Q9BYR7 98 aa5.64□□□□□ -1.51
PDXDC1-217ENST00000570001 TNXBP22105 4242 aa5.6□□□□□ -1.51
PDXDC1-217ENST00000570001 KRTAP12-2P59991 146 aa5.56□□□□□ -1.52
PDXDC1-217ENST00000570001 EPPK1P58107 5090 aaKnown RBP5.54□□□□□ -1.52
PDXDC1-217ENST00000570001 KRTAP10-10P60014 251 aa5.53□□□□□ -1.52
PDXDC1-217ENST00000570001 KRTAP12-1P59990 96 aa5.52□□□□□ -1.53
PDXDC1-217ENST00000570001 C10orf95Q9H7T3 257 aa5.49□□□□□ -1.53
PDXDC1-217ENST00000570001 LRP2P98164 4655 aa5.48□□□□□ -1.53
PDXDC1-217ENST00000570001 TNP1P09430 55 aa5.47□□□□□ -1.53
PDXDC1-217ENST00000570001 KRTAP4-1Q9BYQ7 146 aa5.46□□□□□ -1.53
PDXDC1-217ENST00000570001 HERC2O95714 4834 aa5.46□□□□□ -1.54
PDXDC1-217ENST00000570001 LPAP08519 4548 aa5.38□□□□□ -1.55
PDXDC1-217ENST00000570001 BIRC6Q9NR09 4857 aa5.36□□□□□ -1.55
PDXDC1-217ENST00000570001 ABCA13Q86UQ4 5058 aa5.35□□□□□ -1.55
PDXDC1-217ENST00000570001 LORP23490 312 aaPredicted RBP5.32□□□□□ -1.56
PDXDC1-217ENST00000570001 PRO2289Q9P1D8 64 aa5.31□□□□□ -1.56
PDXDC1-217ENST00000570001 NDUFAF8A1L188 74 aa5.28□□□□□ -1.56
PDXDC1-217ENST00000570001 PP632Q6XCG6 107 aa5.25□□□□□ -1.57
PDXDC1-217ENST00000570001 HERC1Q15751 4861 aa5.12□□□□□ -1.59
PDXDC1-217ENST00000570001 MT1HP80294 61 aa5.08□□□□□ -1.6
PDXDC1-217ENST00000570001 KRTAP19-2Q3LHN2 52 aa5.08□□□□□ -1.6
PDXDC1-217ENST00000570001 PCLOQ9Y6V0 5065 aa5.04□□□□□ -1.6
PDXDC1-217ENST00000570001 MUC17Q685J3 4493 aa5.02□□□□□ -1.61
PDXDC1-217ENST00000570001 LCE2CQ5TA81 110 aa4.99□□□□□ -1.61
PDXDC1-217ENST00000570001 FLGP20930 4061 aaPredicted RBP4.98□□□□□ -1.61
PDXDC1-217ENST00000570001 MT2AP02795 61 aa4.97□□□□□ -1.61
PDXDC1-217ENST00000570001 SPRR2GQ9BYE4 73 aa4.97□□□□□ -1.61
PDXDC1-217ENST00000570001 MUC2Q02817 5179 aa4.97□□□□□ -1.61
PDXDC1-217ENST00000570001 HMCN2Q8NDA2 5059 aa4.95□□□□□ -1.62
PDXDC1-217ENST00000570001 MT1FP04733 61 aa4.94□□□□□ -1.62
PDXDC1-217ENST00000570001 KRTAP15-1Q3LI76 137 aa4.92□□□□□ -1.62
PDXDC1-217ENST00000570001 KRTAP19-1Q8IUB9 90 aa4.88□□□□□ -1.63
PDXDC1-217ENST00000570001 KRTAP23-1A1A580 65 aa4.85□□□□□ -1.63
PDXDC1-217ENST00000570001 RNF213Q63HN8 5207 aa4.84□□□□□ -1.63
PDXDC1-217ENST00000570001 KRTAP9-8Q9BYQ0 159 aa4.81□□□□□ -1.64
PDXDC1-217ENST00000570001 UBR4Q5T4S7 5183 aa4.8□□□□□ -1.64
PDXDC1-217ENST00000570001 FAT4Q6V0I7 4981 aa4.8□□□□□ -1.64
PDXDC1-217ENST00000570001 LCE3AQ5TA76 89 aa4.78□□□□□ -1.64
PDXDC1-217ENST00000570001 KRTAP10-12P60413 245 aa4.77□□□□□ -1.65
PDXDC1-217ENST00000570001 KRTAP19-8Q3LI54 63 aa4.74□□□□□ -1.65
PDXDC1-217ENST00000570001 MT1BP07438 61 aa4.66□□□□□ -1.66
PDXDC1-217ENST00000570001 KRTAP12-3P60328 96 aa4.66□□□□□ -1.66
PDXDC1-217ENST00000570001 KRTAP9-3Q9BYQ3 159 aa4.64□□□□□ -1.67
PDXDC1-217ENST00000570001 MT1XP80297 61 aa4.61□□□□□ -1.67
PDXDC1-217ENST00000570001 KRTAP10-5P60370 271 aa4.6□□□□□ -1.67
PDXDC1-217ENST00000570001 CRCT1Q9UGL9 99 aa4.56□□□□□ -1.68
PDXDC1-217ENST00000570001 KRTAP8-1Q8IUC2 63 aa4.54□□□□□ -1.68
PDXDC1-217ENST00000570001 KRTAP10-7P60409 375 aaPredicted RBP4.53□□□□□ -1.68
PDXDC1-217ENST00000570001 LCE2BO14633 110 aa4.48□□□□□ -1.69
PDXDC1-217ENST00000570001 LCE2AQ5TA79 106 aaPredicted RBP4.44□□□□□ -1.7
PDXDC1-217ENST00000570001 KRTAP19-5Q3LI72 72 aa4.41□□□□□ -1.7
PDXDC1-217ENST00000570001 SPRR5A0A1B0GTR4 108 aa4.33□□□□□ -1.72
PDXDC1-217ENST00000570001 KRTAP4-8A0A0G2JLE6 195 aa4.3□□□□□ -1.72
PDXDC1-217ENST00000570001 KRTAP4-8Q9BYQ9 185 aa4.3□□□□□ -1.72
PDXDC1-217ENST00000570001 LCE3CQ5T5A8 94 aa4.26□□□□□ -1.73
PDXDC1-217ENST00000570001 FSIP2Q5CZC0 6907 aa4.23□□□□□ -1.73
PDXDC1-217ENST00000570001 INE1O15225 51 aa4.21□□□□□ -1.73
PDXDC1-217ENST00000570001 SPRR2FQ96RM1 72 aa4.21□□□□□ -1.74
PDXDC1-217ENST00000570001 USH2AO75445 5202 aa4.19□□□□□ -1.74
PDXDC1-217ENST00000570001 KRTAP19-6Q3LI70 58 aa4.12□□□□□ -1.75
PDXDC1-217ENST00000570001 KRTAP19-4Q3LI73 84 aa4.12□□□□□ -1.75
PDXDC1-217ENST00000570001 MT1EP04732 61 aa4.05□□□□□ -1.76
PDXDC1-217ENST00000570001 KRTAP19-7Q3SYF9 63 aa4.05□□□□□ -1.76
PDXDC1-217ENST00000570001 KMT2DO14686 5537 aa4.03□□□□□ -1.76
PDXDC1-217ENST00000570001 MT1LQ93083 61 aa4.03□□□□□ -1.76
PDXDC1-217ENST00000570001 KRTAP4-7Q9BYR0 210 aa4.02□□□□□ -1.77
PDXDC1-217ENST00000570001 LCE2DQ5TA82 110 aaPredicted RBP3.99□□□□□ -1.77
PDXDC1-217ENST00000570001 SPRR2EP22531 72 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms