RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 DYNC2H1Q8NCM8 4307 aaKnown RBP5.25□□□□□ -1.57
USB1-212ENST00000566082 DNAH6Q9C0G6 4158 aa5.25□□□□□ -1.57
USB1-212ENST00000566082 DNAH11Q96DT5 4516 aa5.25□□□□□ -1.57
USB1-212ENST00000566082 PLAC4Q8WY50 150 aa5.23□□□□□ -1.57
USB1-212ENST00000566082 KRTAP12-1P59990 96 aa5.23□□□□□ -1.57
USB1-212ENST00000566082 DNAH2Q9P225 4427 aa5.22□□□□□ -1.57
USB1-212ENST00000566082 DNAH8Q96JB1 4490 aa5.21□□□□□ -1.58
USB1-212ENST00000566082 A0A1B0GVY2 172 aa5.21□□□□□ -1.58
USB1-212ENST00000566082 PKHD1P08F94 4074 aa5.2□□□□□ -1.58
USB1-212ENST00000566082 M0R2T5 61 aa5.19□□□□□ -1.58
USB1-212ENST00000566082 KRTAP3-3Q9BYR6 98 aa5.18□□□□□ -1.58
USB1-212ENST00000566082 KRTAP3-2Q9BYR7 98 aa5.17□□□□□ -1.58
USB1-212ENST00000566082 FAT2Q9NYQ8 4349 aa5.13□□□□□ -1.59
USB1-212ENST00000566082 ALMS1Q8TCU4 4167 aa5.13□□□□□ -1.59
USB1-212ENST00000566082 LRP1BQ9NZR2 4599 aa5.12□□□□□ -1.59
USB1-212ENST00000566082 RYR3Q15413 4870 aa5.11□□□□□ -1.59
USB1-212ENST00000566082 DNAH17Q9UFH2 4485 aa5.11□□□□□ -1.59
USB1-212ENST00000566082 HECTD4Q9Y4D8 3996 aa5.1□□□□□ -1.59
USB1-212ENST00000566082 TNP1P09430 55 aa5.08□□□□□ -1.6
USB1-212ENST00000566082 DNAH5Q8TE73 4624 aa5.08□□□□□ -1.6
USB1-212ENST00000566082 KRTAP10-4P60372 401 aaPredicted RBP5.07□□□□□ -1.6
USB1-212ENST00000566082 PP632Q6XCG6 107 aa5.06□□□□□ -1.6
USB1-212ENST00000566082 SACSQ9NZJ4 4579 aa5.05□□□□□ -1.6
USB1-212ENST00000566082 KRTAP15-1Q3LI76 137 aa5.05□□□□□ -1.6
USB1-212ENST00000566082 FAT1Q14517 4588 aa5.02□□□□□ -1.61
USB1-212ENST00000566082 EPPK1P58107 5090 aaKnown RBP4.98□□□□□ -1.61
USB1-212ENST00000566082 PKD1P98161 4303 aa4.96□□□□□ -1.62
USB1-212ENST00000566082 VPS13BQ7Z7G8 4022 aa4.93□□□□□ -1.62
USB1-212ENST00000566082 MT1HL1P0DM35 61 aa4.92□□□□□ -1.62
USB1-212ENST00000566082 RYR2Q92736 4967 aa4.92□□□□□ -1.62
USB1-212ENST00000566082 KIAA1109Q2LD37 5005 aa4.91□□□□□ -1.62
USB1-212ENST00000566082 DYNC1H1Q14204 4646 aaKnown RBP4.89□□□□□ -1.63
USB1-212ENST00000566082 MYCBP2O75592 4640 aa4.89□□□□□ -1.63
USB1-212ENST00000566082 LRP1Q07954 4544 aaKnown RBP4.87□□□□□ -1.63
USB1-212ENST00000566082 APOBP04114 4563 aaKnown RBP4.85□□□□□ -1.63
USB1-212ENST00000566082 FAT3Q8TDW7 4589 aa4.82□□□□□ -1.64
USB1-212ENST00000566082 LORP23490 312 aaPredicted RBP4.81□□□□□ -1.64
USB1-212ENST00000566082 KRTAP17-1Q9BYP8 105 aa4.78□□□□□ -1.64
USB1-212ENST00000566082 HSPG2P98160 4391 aa4.78□□□□□ -1.64
USB1-212ENST00000566082 KRTAP10-10P60014 251 aa4.73□□□□□ -1.65
USB1-212ENST00000566082 ABCA13Q86UQ4 5058 aa4.71□□□□□ -1.66
USB1-212ENST00000566082 RYR1P21817 5038 aa4.71□□□□□ -1.66
USB1-212ENST00000566082 KRTAP4-5Q9BYR2 181 aa4.7□□□□□ -1.66
USB1-212ENST00000566082 MUC2Q02817 5179 aa4.64□□□□□ -1.67
USB1-212ENST00000566082 PCLOQ9Y6V0 5065 aa4.63□□□□□ -1.67
USB1-212ENST00000566082 PKHD1L1Q86WI1 4243 aa4.61□□□□□ -1.67
USB1-212ENST00000566082 LPAP08519 4548 aa4.6□□□□□ -1.67
USB1-212ENST00000566082 HERC1Q15751 4861 aa4.6□□□□□ -1.67
USB1-212ENST00000566082 KRTAP4-1Q9BYQ7 146 aa4.57□□□□□ -1.68
USB1-212ENST00000566082 LRP2P98164 4655 aa4.56□□□□□ -1.68
USB1-212ENST00000566082 HERC2O95714 4834 aa4.54□□□□□ -1.68
USB1-212ENST00000566082 KRTAP23-1A1A580 65 aa4.53□□□□□ -1.68
USB1-212ENST00000566082 RNF213Q63HN8 5207 aa4.52□□□□□ -1.69
USB1-212ENST00000566082 TNXBP22105 4242 aa4.45□□□□□ -1.7
USB1-212ENST00000566082 LCE3AQ5TA76 89 aa4.45□□□□□ -1.7
USB1-212ENST00000566082 PRO2289Q9P1D8 64 aa4.45□□□□□ -1.7
USB1-212ENST00000566082 UBR4Q5T4S7 5183 aa4.42□□□□□ -1.7
USB1-212ENST00000566082 LCE2DQ5TA82 110 aaPredicted RBP4.4□□□□□ -1.7
USB1-212ENST00000566082 BIRC6Q9NR09 4857 aa4.37□□□□□ -1.71
USB1-212ENST00000566082 KRTAP10-12P60413 245 aa4.35□□□□□ -1.71
USB1-212ENST00000566082 FAT4Q6V0I7 4981 aa4.34□□□□□ -1.71
USB1-212ENST00000566082 KRTAP12-3P60328 96 aa4.34□□□□□ -1.72
USB1-212ENST00000566082 INE1O15225 51 aa4.32□□□□□ -1.72
USB1-212ENST00000566082 SPRR2GQ9BYE4 73 aa4.23□□□□□ -1.73
USB1-212ENST00000566082 LCE2CQ5TA81 110 aa4.19□□□□□ -1.74
USB1-212ENST00000566082 MT2AP02795 61 aa4.17□□□□□ -1.74
USB1-212ENST00000566082 KRTAP19-1Q8IUB9 90 aa4.16□□□□□ -1.74
USB1-212ENST00000566082 MT1HP80294 61 aa4.16□□□□□ -1.74
USB1-212ENST00000566082 MT1FP04733 61 aa4.15□□□□□ -1.74
USB1-212ENST00000566082 HMCN2Q8NDA2 5059 aa4.14□□□□□ -1.75
USB1-212ENST00000566082 SPRR5A0A1B0GTR4 108 aa4.13□□□□□ -1.75
USB1-212ENST00000566082 KRTAP8-1Q8IUC2 63 aa4.12□□□□□ -1.75
USB1-212ENST00000566082 LCE2AQ5TA79 106 aaPredicted RBP4.11□□□□□ -1.75
USB1-212ENST00000566082 KRTAP19-2Q3LHN2 52 aa4.09□□□□□ -1.76
USB1-212ENST00000566082 LCE2BO14633 110 aa4.05□□□□□ -1.76
USB1-212ENST00000566082 FSIP2Q5CZC0 6907 aa4.05□□□□□ -1.76
USB1-212ENST00000566082 MUC17Q685J3 4493 aa4.03□□□□□ -1.76
USB1-212ENST00000566082 KRTAP10-7P60409 375 aaPredicted RBP3.99□□□□□ -1.77
USB1-212ENST00000566082 CRCT1Q9UGL9 99 aa3.98□□□□□ -1.77
USB1-212ENST00000566082 KRTAP19-5Q3LI72 72 aa3.97□□□□□ -1.77
USB1-212ENST00000566082 MT1XP80297 61 aa3.96□□□□□ -1.78
USB1-212ENST00000566082 KRTAP19-8Q3LI54 63 aa3.95□□□□□ -1.78
USB1-212ENST00000566082 USH2AO75445 5202 aa3.95□□□□□ -1.78
USB1-212ENST00000566082 KRTAP10-5P60370 271 aa3.95□□□□□ -1.78
USB1-212ENST00000566082 FLGP20930 4061 aaPredicted RBP3.93□□□□□ -1.78
USB1-212ENST00000566082 MT1BP07438 61 aa3.93□□□□□ -1.78
USB1-212ENST00000566082 LCE3CQ5T5A8 94 aa3.92□□□□□ -1.78
USB1-212ENST00000566082 KRTAP9-8Q9BYQ0 159 aa3.92□□□□□ -1.78
USB1-212ENST00000566082 KRTAP4-8A0A0G2JLE6 195 aa3.78□□□□□ -1.8
USB1-212ENST00000566082 KRTAP4-8Q9BYQ9 185 aa3.78□□□□□ -1.8
USB1-212ENST00000566082 KRTAP9-3Q9BYQ3 159 aa3.75□□□□□ -1.81
USB1-212ENST00000566082 KRTAP4-7Q9BYR0 210 aa3.69□□□□□ -1.82
USB1-212ENST00000566082 KMT2DO14686 5537 aa3.67□□□□□ -1.82
USB1-212ENST00000566082 MT1GP13640 62 aa3.55□□□□□ -1.84
USB1-212ENST00000566082 KRTAP12-4P60329 112 aa3.54□□□□□ -1.84
USB1-212ENST00000566082 SYNE1Q8NF91 8797 aaKnown RBP3.54□□□□□ -1.84
USB1-212ENST00000566082 KRTAP19-4Q3LI73 84 aa3.53□□□□□ -1.84
USB1-212ENST00000566082 MT1LQ93083 61 aa3.5□□□□□ -1.85
USB1-212ENST00000566082 KRTAP9-6A8MVA2 160 aa3.48□□□□□ -1.85
USB1-212ENST00000566082 SPRR2FQ96RM1 72 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms