RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 FLGP20930 4061 aaPredicted RBP0.85□□□□□ -2.27
CHD9-214ENST00000565119 NCOR2Q9Y618 2525 aa0.85□□□□□ -2.27
CHD9-214ENST00000565119 LPAP08519 4548 aa0.85□□□□□ -2.27
CHD9-214ENST00000565119 SONP18583 2426 aaKnown RBP0.85□□□□□ -2.27
CHD9-214ENST00000565119 ACACBO00763 2458 aa0.84□□□□□ -2.27
CHD9-214ENST00000565119 RHPN1-AS1Q9BWJ2 59 aa0.84□□□□□ -2.27
CHD9-214ENST00000565119 SPTBN5Q9NRC6 3674 aaKnown RBP0.84□□□□□ -2.28
CHD9-214ENST00000565119 ZANQ9Y493 2812 aa0.84□□□□□ -2.28
CHD9-214ENST00000565119 HRNRQ86YZ3 2850 aaPredicted RBP0.84□□□□□ -2.28
CHD9-214ENST00000565119 DNAH6Q9C0G6 4158 aa0.84□□□□□ -2.28
CHD9-214ENST00000565119 ATMQ13315 3056 aa0.83□□□□□ -2.28
CHD9-214ENST00000565119 AKAP9Q99996 3911 aa0.83□□□□□ -2.28
CHD9-214ENST00000565119 SRCAPQ6ZRS2 3230 aa0.83□□□□□ -2.28
CHD9-214ENST00000565119 MT1AP04731 61 aa0.83□□□□□ -2.28
CHD9-214ENST00000565119 HTTP42858 3142 aa0.82□□□□□ -2.28
CHD9-214ENST00000565119 ITPR1Q14643 2758 aa0.82□□□□□ -2.28
CHD9-214ENST00000565119 LRBAP50851 2863 aa0.82□□□□□ -2.28
CHD9-214ENST00000565119 DNAH9Q9NYC9 4486 aa0.81□□□□□ -2.28
CHD9-214ENST00000565119 CACNA1AO00555 2505 aa0.81□□□□□ -2.28
CHD9-214ENST00000565119 SPTAN1Q13813 2472 aaKnown RBP0.8□□□□□ -2.28
CHD9-214ENST00000565119 FRYLO94915 3013 aa0.8□□□□□ -2.28
CHD9-214ENST00000565119 APOBP04114 4563 aaKnown RBP0.8□□□□□ -2.28
CHD9-214ENST00000565119 PRUNE2Q8WUY3 3088 aa0.79□□□□□ -2.28
CHD9-214ENST00000565119 MAP1AP78559 2803 aaPredicted RBP0.79□□□□□ -2.28
CHD9-214ENST00000565119 MYO18BQ8IUG5 2567 aa0.79□□□□□ -2.28
CHD9-214ENST00000565119 TEP1Q99973 2627 aaKnown RBP0.79□□□□□ -2.28
CHD9-214ENST00000565119 MUC5BQ9HC84 5762 aaPredicted RBP0.79□□□□□ -2.28
CHD9-214ENST00000565119 TRIOO75962 3097 aa0.78□□□□□ -2.28
CHD9-214ENST00000565119 SYNE1Q8NF91 8797 aaKnown RBP0.78□□□□□ -2.28
CHD9-214ENST00000565119 SPRR2AP35326 72 aa0.78□□□□□ -2.28
CHD9-214ENST00000565119 TLN2Q9Y4G6 2542 aa0.78□□□□□ -2.28
CHD9-214ENST00000565119 DNAH1Q9P2D7 4330 aa0.78□□□□□ -2.29
CHD9-214ENST00000565119 FAT3Q8TDW7 4589 aa0.77□□□□□ -2.29
CHD9-214ENST00000565119 TLN1Q9Y490 2541 aaKnown RBP0.77□□□□□ -2.29
CHD9-214ENST00000565119 CFAP46Q8IYW2 2715 aa0.77□□□□□ -2.29
CHD9-214ENST00000565119 USP9XQ93008 2570 aaPredicted RBP0.77□□□□□ -2.29
CHD9-214ENST00000565119 DNAH12Q6ZR08 3092 aa0.77□□□□□ -2.29
CHD9-214ENST00000565119 DOPEY1Q5JWR5 2465 aa0.76□□□□□ -2.29
CHD9-214ENST00000565119 CSMD1Q96PZ7 3565 aa0.76□□□□□ -2.29
CHD9-214ENST00000565119 LAMA3Q16787 3333 aa0.76□□□□□ -2.29
CHD9-214ENST00000565119 TGP01266 2768 aa0.76□□□□□ -2.29
CHD9-214ENST00000565119 PKHD1P08F94 4074 aa0.76□□□□□ -2.29
CHD9-214ENST00000565119 MXRA5Q9NR99 2828 aa0.75□□□□□ -2.29
CHD9-214ENST00000565119 FASNP49327 2511 aaKnown RBP0.75□□□□□ -2.29
CHD9-214ENST00000565119 SMR3BP02814 79 aaPredicted RBP0.75□□□□□ -2.29
CHD9-214ENST00000565119 KRTAP6-2Q3LI66 62 aa0.75□□□□□ -2.29
CHD9-214ENST00000565119 KRTAP19-5Q3LI72 72 aa0.75□□□□□ -2.29
CHD9-214ENST00000565119 DEFB124Q8NES8 71 aa0.75□□□□□ -2.29
CHD9-214ENST00000565119 CEP350Q5VT06 3117 aa0.75□□□□□ -2.29
CHD9-214ENST00000565119 DNAH10Q8IVF4 4471 aa0.75□□□□□ -2.29
CHD9-214ENST00000565119 ADGRG4Q8IZF6 3080 aa0.75□□□□□ -2.29
CHD9-214ENST00000565119 CENPEQ02224 2701 aa0.74□□□□□ -2.29
CHD9-214ENST00000565119 C5orf42Q9H799 3197 aa0.74□□□□□ -2.29
CHD9-214ENST00000565119 NIPBLQ6KC79 2804 aaeCLIP0.74□□□□□ -2.291e-5■□□□□ 11.1
CHD9-214ENST00000565119 STATHP02808 62 aa0.74□□□□□ -2.29
CHD9-214ENST00000565119 COX14Q96I36 57 aa0.74□□□□□ -2.29
CHD9-214ENST00000565119 COL6A3P12111 3177 aa0.74□□□□□ -2.29
CHD9-214ENST00000565119 IGSF10Q6WRI0 2623 aa0.74□□□□□ -2.29
CHD9-214ENST00000565119 NBEAL1Q6ZS30 2694 aa0.73□□□□□ -2.29
CHD9-214ENST00000565119 TEX15Q9BXT5 2789 aa0.73□□□□□ -2.29
CHD9-214ENST00000565119 A0A096LNI7 61 aa0.73□□□□□ -2.29
CHD9-214ENST00000565119 APELAP0DMC3 54 aa0.73□□□□□ -2.29
CHD9-214ENST00000565119 DEFB1P60022 68 aa0.73□□□□□ -2.29
CHD9-214ENST00000565119 CEP295Q9C0D2 2601 aa0.72□□□□□ -2.29
CHD9-214ENST00000565119 SMG1Q96Q15 3661 aaKnown RBP0.72□□□□□ -2.29
CHD9-214ENST00000565119 LRP1BQ9NZR2 4599 aa0.71□□□□□ -2.3
CHD9-214ENST00000565119 MYO9AB2RTY4 2548 aa0.71□□□□□ -2.3
CHD9-214ENST00000565119 DMDP11532 3685 aa0.7□□□□□ -2.3
CHD9-214ENST00000565119 ITPR2Q14571 2701 aa0.7□□□□□ -2.3
CHD9-214ENST00000565119 LAMA1P25391 3075 aa0.7□□□□□ -2.3
CHD9-214ENST00000565119 MAST4O15021 2626 aa0.69□□□□□ -2.3
CHD9-214ENST00000565119 FAT1Q14517 4588 aa0.69□□□□□ -2.3
CHD9-214ENST00000565119 DEFB136Q30KP8 78 aa0.68□□□□□ -2.3
CHD9-214ENST00000565119 SPRR2FQ96RM1 72 aa0.68□□□□□ -2.3
CHD9-214ENST00000565119 GPR98Q8WXG9 6306 aa0.68□□□□□ -2.3
CHD9-214ENST00000565119 CMYA5Q8N3K9 4069 aa0.68□□□□□ -2.3
CHD9-214ENST00000565119 SVEP1Q4LDE5 3571 aa0.67□□□□□ -2.3
CHD9-214ENST00000565119 SPRR2EP22531 72 aa0.67□□□□□ -2.3
CHD9-214ENST00000565119 BOD1L1Q8NFC6 3051 aa0.67□□□□□ -2.3
CHD9-214ENST00000565119 VPS13AQ96RL7 3174 aa0.67□□□□□ -2.3
CHD9-214ENST00000565119 PLECQ15149 4684 aaKnown RBP0.67□□□□□ -2.3
CHD9-214ENST00000565119 FLNAP21333 2647 aaKnown RBP0.67□□□□□ -2.3
CHD9-214ENST00000565119 MKI67P46013 3256 aaKnown RBP0.66□□□□□ -2.3
CHD9-214ENST00000565119 HTN1P15515 57 aa0.66□□□□□ -2.3
CHD9-214ENST00000565119 DEFB108BQ8NET1 73 aa0.66□□□□□ -2.3
CHD9-214ENST00000565119 WDFY4Q6ZS81 3184 aa0.66□□□□□ -2.3
CHD9-214ENST00000565119 CFAP47Q6ZTR5 3102 aa0.66□□□□□ -2.3
CHD9-214ENST00000565119 TRRAPQ9Y4A5 3859 aa0.65□□□□□ -2.31
CHD9-214ENST00000565119 LAMA2P24043 3122 aaKnown RBP0.65□□□□□ -2.31
CHD9-214ENST00000565119 FREM2Q5SZK8 3169 aa0.65□□□□□ -2.31
CHD9-214ENST00000565119 MGAM2Q2M2H8 2515 aa0.65□□□□□ -2.31
CHD9-214ENST00000565119 UTRNP46939 3433 aa0.64□□□□□ -2.31
CHD9-214ENST00000565119 GOLGB1Q14789 3259 aaKnown RBP0.64□□□□□ -2.31
CHD9-214ENST00000565119 Q9Y3F1 56 aa0.64□□□□□ -2.31
CHD9-214ENST00000565119 STAB2Q8WWQ8 2551 aa0.64□□□□□ -2.31
CHD9-214ENST00000565119 UBR4Q5T4S7 5183 aa0.64□□□□□ -2.31
CHD9-214ENST00000565119 EP400Q96L91 3159 aa0.63□□□□□ -2.31
CHD9-214ENST00000565119 PCNTO95613 3336 aa0.63□□□□□ -2.31
CHD9-214ENST00000565119 CD52P31358 61 aa0.63□□□□□ -2.31
CHD9-214ENST00000565119 PCLOQ9Y6V0 5065 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms