RNA–Protein interactions for RNA: ENST00000564054.1

SH3GL3-206, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 2

Gene SH3GL3, Length 758 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-206ENST00000564054 ZCCHC13Q8WW36 166 aaKnown RBP3.09□□□□□ -1.91
SH3GL3-206ENST00000564054 LIMD2Q9BT23 127 aa3.09□□□□□ -1.91
SH3GL3-206ENST00000564054 FAT2Q9NYQ8 4349 aa3.08□□□□□ -1.92
SH3GL3-206ENST00000564054 EPPK1P58107 5090 aaKnown RBP3.08□□□□□ -1.92
SH3GL3-206ENST00000564054 TRAV22A0A0B4J277 110 aa3.08□□□□□ -1.92
SH3GL3-206ENST00000564054 SPINK6Q6UWN8 80 aa3.08□□□□□ -1.92
SH3GL3-206ENST00000564054 TYMSOSQ8TAI1 123 aa3.08□□□□□ -1.92
SH3GL3-206ENST00000564054 LINC00208Q96KT6 92 aa3.08□□□□□ -1.92
SH3GL3-206ENST00000564054 MRPL34Q9BQ48 92 aaKnown RBP3.08□□□□□ -1.92
SH3GL3-206ENST00000564054 HYDINQ4G0P3 5121 aa3.08□□□□□ -1.92
SH3GL3-206ENST00000564054 Q5XG85 94 aa3.07□□□□□ -1.92
SH3GL3-206ENST00000564054 C1orf64Q8NEQ6 169 aa3.07□□□□□ -1.92
SH3GL3-206ENST00000564054 KRTAP13-2Q52LG2 175 aa3.05□□□□□ -1.92
SH3GL3-206ENST00000564054 SPANXA2-OT1Q8N9U9 137 aa3.05□□□□□ -1.92
SH3GL3-206ENST00000564054 VPS13BQ7Z7G8 4022 aa3.04□□□□□ -1.92
SH3GL3-206ENST00000564054 SPINK1P00995 79 aa3.04□□□□□ -1.92
SH3GL3-206ENST00000564054 KRTAP1-4P0C5Y4 121 aa3.04□□□□□ -1.92
SH3GL3-206ENST00000564054 LINC01554Q52M75 96 aa3.04□□□□□ -1.92
SH3GL3-206ENST00000564054 SPAG11AQ6PDA7 123 aa3.04□□□□□ -1.92
SH3GL3-206ENST00000564054 CYP4F30PQ9H0H9 118 aa3.04□□□□□ -1.92
SH3GL3-206ENST00000564054 SACSQ9NZJ4 4579 aa3.03□□□□□ -1.92
SH3GL3-206ENST00000564054 RYR2Q92736 4967 aa3.03□□□□□ -1.92
SH3GL3-206ENST00000564054 LOC101927531A0A1B0GV80 90 aa3.02□□□□□ -1.93
SH3GL3-206ENST00000564054 RPS29P62273 56 aaKnown RBP3.02□□□□□ -1.93
SH3GL3-206ENST00000564054 LCE1CQ5T751 118 aa3.02□□□□□ -1.93
SH3GL3-206ENST00000564054 LCE1BQ5T7P3 118 aa3.02□□□□□ -1.93
SH3GL3-206ENST00000564054 LINC00304Q8N9R0 145 aa3.01□□□□□ -1.93
SH3GL3-206ENST00000564054 LRP1BQ9NZR2 4599 aa3□□□□□ -1.93
SH3GL3-206ENST00000564054 SMR3BP02814 79 aaPredicted RBP3□□□□□ -1.93
SH3GL3-206ENST00000564054 RYR1P21817 5038 aa2.99□□□□□ -1.93
SH3GL3-206ENST00000564054 PCOTHQ58A44 107 aa2.99□□□□□ -1.93
SH3GL3-206ENST00000564054 Q5W150 140 aa2.98□□□□□ -1.93
SH3GL3-206ENST00000564054 FP248Q71RG6 208 aaPredicted RBP2.98□□□□□ -1.93
SH3GL3-206ENST00000564054 PKHD1P08F94 4074 aa2.98□□□□□ -1.93
SH3GL3-206ENST00000564054 DYNC1H1Q14204 4646 aaKnown RBP2.97□□□□□ -1.93
SH3GL3-206ENST00000564054 PKHD1L1Q86WI1 4243 aa2.97□□□□□ -1.93
SH3GL3-206ENST00000564054 Q1T7F1 81 aa2.97□□□□□ -1.93
SH3GL3-206ENST00000564054 A6NED7 52 aa2.96□□□□□ -1.94
SH3GL3-206ENST00000564054 BRK1Q8WUW1 75 aa2.96□□□□□ -1.94
SH3GL3-206ENST00000564054 HERC2O95714 4834 aa2.96□□□□□ -1.94
SH3GL3-206ENST00000564054 ACYP2P14621 99 aa2.95□□□□□ -1.94
SH3GL3-206ENST00000564054 COA5Q86WW8 74 aa2.95□□□□□ -1.94
SH3GL3-206ENST00000564054 APOBP04114 4563 aaKnown RBP2.94□□□□□ -1.94
SH3GL3-206ENST00000564054 KRTAP10-4P60372 401 aaPredicted RBP2.94□□□□□ -1.94
SH3GL3-206ENST00000564054 RETNLBQ9BQ08 111 aa2.94□□□□□ -1.94
SH3GL3-206ENST00000564054 C7orf65Q6ZTY9 151 aa2.93□□□□□ -1.94
SH3GL3-206ENST00000564054 A8MUU9 505 aa2.92□□□□□ -1.94
SH3GL3-206ENST00000564054 HRES1P13985 223 aa2.92□□□□□ -1.94
SH3GL3-206ENST00000564054 ADM2Q7Z4H4 148 aa2.92□□□□□ -1.94
SH3GL3-206ENST00000564054 CHKB-CPT1BH3BT56 60 aa2.91□□□□□ -1.94
SH3GL3-206ENST00000564054 Q5VSD8 79 aa2.9□□□□□ -1.95
SH3GL3-206ENST00000564054 DMAC1Q96GE9 116 aa2.9□□□□□ -1.95
SH3GL3-206ENST00000564054 FLG2Q5D862 2391 aaPredicted RBP2.9□□□□□ -1.95
SH3GL3-206ENST00000564054 C9orf92A6NGG3 77 aa2.89□□□□□ -1.95
SH3GL3-206ENST00000564054 C20orf166-AS1Q96NR2 134 aa2.88□□□□□ -1.95
SH3GL3-206ENST00000564054 PRR15LQ9BU68 103 aa2.88□□□□□ -1.95
SH3GL3-206ENST00000564054 LINC01558Q9Y6Z2 57 aa2.88□□□□□ -1.95
SH3GL3-206ENST00000564054 FAT1Q14517 4588 aa2.88□□□□□ -1.95
SH3GL3-206ENST00000564054 KIAA1109Q2LD37 5005 aa2.87□□□□□ -1.95
SH3GL3-206ENST00000564054 A0A1B0GU33 70 aa2.86□□□□□ -1.95
SH3GL3-206ENST00000564054 DMBT1Q9UGM3 2413 aaPredicted RBP2.85□□□□□ -1.95
SH3GL3-206ENST00000564054 Q5VV11 94 aa2.85□□□□□ -1.95
SH3GL3-206ENST00000564054 SPTSSBQ8NFR3 76 aa2.85□□□□□ -1.95
SH3GL3-206ENST00000564054 TNXBP22105 4242 aa2.84□□□□□ -1.95
SH3GL3-206ENST00000564054 KRTAP5-8O75690 187 aa2.84□□□□□ -1.95
SH3GL3-206ENST00000564054 ATP11AUNQ6ZP68 121 aa2.84□□□□□ -1.95
SH3GL3-206ENST00000564054 ABCA13Q86UQ4 5058 aa2.84□□□□□ -1.95
SH3GL3-206ENST00000564054 HSPG2P98160 4391 aa2.84□□□□□ -1.96
SH3GL3-206ENST00000564054 UBR4Q5T4S7 5183 aa2.81□□□□□ -1.96
SH3GL3-206ENST00000564054 A0A1B0GU69 56 aa2.81□□□□□ -1.96
SH3GL3-206ENST00000564054 SPINK7P58062 85 aa2.81□□□□□ -1.96
SH3GL3-206ENST00000564054 FAT3Q8TDW7 4589 aa2.81□□□□□ -1.96
SH3GL3-206ENST00000564054 SPINT4Q6UDR6 99 aa2.8□□□□□ -1.96
SH3GL3-206ENST00000564054 RPL37P61927 97 aaKnown RBP2.79□□□□□ -1.96
SH3GL3-206ENST00000564054 CDC42SE1Q9NRR8 79 aa2.79□□□□□ -1.96
SH3GL3-206ENST00000564054 COX6B2Q6YFQ2 88 aa2.78□□□□□ -1.96
SH3GL3-206ENST00000564054 HERC1Q15751 4861 aa2.78□□□□□ -1.96
SH3GL3-206ENST00000564054 LRP1Q07954 4544 aaKnown RBP2.77□□□□□ -1.97
SH3GL3-206ENST00000564054 MT1HL1P0DM35 61 aa2.77□□□□□ -1.97
SH3GL3-206ENST00000564054 ROMO1P60602 79 aa2.77□□□□□ -1.97
SH3GL3-206ENST00000564054 A6NN06 94 aa2.76□□□□□ -1.97
SH3GL3-206ENST00000564054 UQCR11O14957 56 aa2.76□□□□□ -1.97
SH3GL3-206ENST00000564054 TPRXLQ17RH7 258 aa2.74□□□□□ -1.97
SH3GL3-206ENST00000564054 SPATA8Q6RVD6 105 aa2.73□□□□□ -1.97
SH3GL3-206ENST00000564054 MIR22HGQ0VDD5 57 aa2.72□□□□□ -1.97
SH3GL3-206ENST00000564054 KRTAP25-1Q3LHN0 102 aa2.72□□□□□ -1.97
SH3GL3-206ENST00000564054 R4GN34 69 aa2.69□□□□□ -1.98
SH3GL3-206ENST00000564054 S4R3F8 94 aa2.69□□□□□ -1.98
SH3GL3-206ENST00000564054 H1FX-AS1Q4G0G2 97 aa2.68□□□□□ -1.98
SH3GL3-206ENST00000564054 PP632Q6XCG6 107 aa2.68□□□□□ -1.98
SH3GL3-206ENST00000564054 MYCBP2O75592 4640 aa2.66□□□□□ -1.98
SH3GL3-206ENST00000564054 PRO2289Q9P1D8 64 aa2.65□□□□□ -1.99
SH3GL3-206ENST00000564054 CSAG1Q6PB30 78 aa2.63□□□□□ -1.99
SH3GL3-206ENST00000564054 H0YAA0 97 aa2.61□□□□□ -1.99
SH3GL3-206ENST00000564054 LRP2P98164 4655 aa2.6□□□□□ -1.99
SH3GL3-206ENST00000564054 RNF213Q63HN8 5207 aa2.58□□□□□ -2
SH3GL3-206ENST00000564054 HMCN2Q8NDA2 5059 aa2.58□□□□□ -2
SH3GL3-206ENST00000564054 LPAP08519 4548 aa2.58□□□□□ -2
SH3GL3-206ENST00000564054 MUC17Q685J3 4493 aa2.57□□□□□ -2
SH3GL3-206ENST00000564054 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms