RNA–Protein interactions for RNA: ENST00000564054.1

SH3GL3-206, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 2

Gene SH3GL3, Length 758 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-206ENST00000564054 AEBP2Q6ZN18 517 aaPredicted RBP28.11■■■□□ 2.09
SH3GL3-206ENST00000564054 CHIC1Q5VXU3 224 aa26.67■■□□□ 1.86
SH3GL3-206ENST00000564054 SENP3Q9H4L4 574 aaPredicted RBP24.12■■□□□ 1.45
SH3GL3-206ENST00000564054 PHF23Q9BUL5 403 aaPredicted RBP23.75■■□□□ 1.39
SH3GL3-206ENST00000564054 FOXD1Q16676 465 aa22.42■■□□□ 1.18
SH3GL3-206ENST00000564054 PLPPR3Q6T4P5 718 aa21.34■■□□□ 1.01
SH3GL3-206ENST00000564054 MSH5O43196 834 aa21.11■□□□□ 0.97
SH3GL3-206ENST00000564054 PIAS4Q8N2W9 510 aaPredicted RBP21■□□□□ 0.95
SH3GL3-206ENST00000564054 PPP6R1Q9UPN7 881 aa20.85■□□□□ 0.93
SH3GL3-206ENST00000564054 ADRA2BP18089 450 aa20.82■□□□□ 0.92
SH3GL3-206ENST00000564054 POTEDQ86YR6 584 aa20.67■□□□□ 0.9
SH3GL3-206ENST00000564054 SCAF1Q9H7N4 1312 aaKnown RBP19.19■□□□□ 0.66
SH3GL3-206ENST00000564054 MAPK8IP2Q13387 824 aaPredicted RBP19.13■□□□□ 0.65
SH3GL3-206ENST00000564054 DMRT2Q9Y5R5 561 aa19.06■□□□□ 0.64
SH3GL3-206ENST00000564054 PPP4R3CPQ6ZMV5 832 aa18.66■□□□□ 0.58
SH3GL3-206ENST00000564054 DCAF8L1A6NGE4 600 aa18.41■□□□□ 0.54
SH3GL3-206ENST00000564054 CNKSR2Q8WXI2 1034 aa18.35■□□□□ 0.53
SH3GL3-206ENST00000564054 HOXD11P31277 338 aaPredicted RBP18.31■□□□□ 0.52
SH3GL3-206ENST00000564054 RNF216Q9NWF9 866 aaPredicted RBP18.19■□□□□ 0.5
SH3GL3-206ENST00000564054 CACNB1Q02641 598 aaPredicted RBP18.18■□□□□ 0.5
SH3GL3-206ENST00000564054 NCBP3Q53F19 620 aaKnown RBP18■□□□□ 0.47
SH3GL3-206ENST00000564054 RNF39Q9H2S5 420 aa17.92■□□□□ 0.46
SH3GL3-206ENST00000564054 C1QBPQ07021 282 aaKnown RBP17.72■□□□□ 0.43
SH3GL3-206ENST00000564054 DNAJC5BQ9UF47 199 aa17.71■□□□□ 0.43
SH3GL3-206ENST00000564054 NPM3O75607 178 aaKnown RBP17.64■□□□□ 0.41
SH3GL3-206ENST00000564054 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.55■□□□□ 0.4
SH3GL3-206ENST00000564054 KCNA4P22459 653 aa17.21■□□□□ 0.35
SH3GL3-206ENST00000564054 U3KPZ7 1027 aaPredicted RBP17.07■□□□□ 0.32
SH3GL3-206ENST00000564054 CAPN15O75808 1086 aa16.93■□□□□ 0.3
SH3GL3-206ENST00000564054 SPINK5Q9NQ38 1064 aaPredicted RBP16.86■□□□□ 0.29
SH3GL3-206ENST00000564054 SLC4A2P04920 1241 aa16.82■□□□□ 0.28
SH3GL3-206ENST00000564054 DSG3P32926 999 aa16.76■□□□□ 0.27
SH3GL3-206ENST00000564054 APLP2Q06481 763 aa16.75■□□□□ 0.27
SH3GL3-206ENST00000564054 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.68■□□□□ 0.26
SH3GL3-206ENST00000564054 HNRNPUL2Q1KMD3 747 aaKnown RBP16.68■□□□□ 0.26
SH3GL3-206ENST00000564054 TRHP20396 242 aaPredicted RBP16.63■□□□□ 0.25
SH3GL3-206ENST00000564054 ZNF219Q9P2Y4 722 aaPredicted RBP16.6■□□□□ 0.25
SH3GL3-206ENST00000564054 SAMD1Q6SPF0 538 aaPredicted RBP16.55■□□□□ 0.24
SH3GL3-206ENST00000564054 ABCB7O75027 752 aa16.49■□□□□ 0.23
SH3GL3-206ENST00000564054 MYCNP04198 464 aaPredicted RBP16.37■□□□□ 0.21
SH3GL3-206ENST00000564054 SLC4A1APQ9BWU0 796 aaKnown RBP16.28■□□□□ 0.2
SH3GL3-206ENST00000564054 POTEHQ6S545 545 aa16.22■□□□□ 0.19
SH3GL3-206ENST00000564054 POLA2Q14181 598 aa16.13■□□□□ 0.17
SH3GL3-206ENST00000564054 FOXD4L1Q9NU39 408 aa16.13■□□□□ 0.17
SH3GL3-206ENST00000564054 RBM42Q9BTD8 480 aaKnown RBP16.1■□□□□ 0.17
SH3GL3-206ENST00000564054 ATF5Q9Y2D1 282 aaPredicted RBP15.9■□□□□ 0.14
SH3GL3-206ENST00000564054 ZBTB12Q9Y330 459 aaPredicted RBP15.86■□□□□ 0.13
SH3GL3-206ENST00000564054 ZBTB22O15209 634 aa15.75■□□□□ 0.11
SH3GL3-206ENST00000564054 CHRDL2Q6WN34 429 aa15.72■□□□□ 0.11
SH3GL3-206ENST00000564054 AKT1S1Q96B36 256 aa15.67■□□□□ 0.1
SH3GL3-206ENST00000564054 ATXN8OSP0DMR3 200 aa15.65■□□□□ 0.1
SH3GL3-206ENST00000564054 OSCARQ8IYS5 282 aa15.6■□□□□ 0.09
SH3GL3-206ENST00000564054 REM2Q8IYK8 340 aaPredicted RBP15.49■□□□□ 0.07
SH3GL3-206ENST00000564054 FBLN2P98095 1184 aa15.45■□□□□ 0.06
SH3GL3-206ENST00000564054 PITPNM1O00562 1244 aa15.32■□□□□ 0.04
SH3GL3-206ENST00000564054 SPDYE2BA6NHP3 402 aa15.31■□□□□ 0.04
SH3GL3-206ENST00000564054 SPDYE6P0CI01 402 aa15.31■□□□□ 0.04
SH3GL3-206ENST00000564054 SPDYE2Q495Y8 402 aa15.31■□□□□ 0.04
SH3GL3-206ENST00000564054 PIP4P2Q8N4L2 257 aa15.29■□□□□ 0.04
SH3GL3-206ENST00000564054 FXR2P51116 673 aaKnown RBP eCLIP15.19■□□□□ 0.02
SH3GL3-206ENST00000564054 MKRN4PQ13434 485 aaPredicted RBP15.16■□□□□ 0.02
SH3GL3-206ENST00000564054 SP7Q8TDD2 431 aaPredicted RBP15.16■□□□□ 0.02
SH3GL3-206ENST00000564054 ZNF692Q9BU19 519 aaPredicted RBP15.14■□□□□ 0.01
SH3GL3-206ENST00000564054 HAX1O00165 279 aa15.13■□□□□ 0.01
SH3GL3-206ENST00000564054 SPDYE1Q8NFV5 336 aaPredicted RBP15.1■□□□□ 0.01
SH3GL3-206ENST00000564054 CLEC11AQ9Y240 323 aa15.1■□□□□ 0.01
SH3GL3-206ENST00000564054 SSUH2Q9Y2M2 353 aa15.04■□□□□ -0
SH3GL3-206ENST00000564054 CSRNP3Q8WYN3 585 aa14.99□□□□□ -0.01
SH3GL3-206ENST00000564054 PRKAR2AP13861 404 aaKnown RBP14.96□□□□□ -0.01
SH3GL3-206ENST00000564054 PABPN1Q86U42 306 aaKnown RBP eCLIP14.89□□□□□ -0.03
SH3GL3-206ENST00000564054 EHMT2Q96KQ7 1210 aa14.83□□□□□ -0.04
SH3GL3-206ENST00000564054 PRR29P0C7W0 189 aa14.82□□□□□ -0.04
SH3GL3-206ENST00000564054 EVX2Q03828 476 aa14.79□□□□□ -0.04
SH3GL3-206ENST00000564054 CHADLQ6NUI6 762 aa14.75□□□□□ -0.05
SH3GL3-206ENST00000564054 C19orf67A6NJJ6 358 aa14.71□□□□□ -0.05
SH3GL3-206ENST00000564054 GABBR2O75899 941 aa14.52□□□□□ -0.09
SH3GL3-206ENST00000564054 STAG3Q9UJ98 1225 aa14.52□□□□□ -0.09
SH3GL3-206ENST00000564054 FARP1Q9Y4F1 1045 aaPredicted RBP14.52□□□□□ -0.09
SH3GL3-206ENST00000564054 SPDYE4A6NLX3 237 aa14.5□□□□□ -0.09
SH3GL3-206ENST00000564054 CD44P16070 742 aaKnown RBP14.49□□□□□ -0.09
SH3GL3-206ENST00000564054 CLCN6P51797 869 aa14.35□□□□□ -0.11
SH3GL3-206ENST00000564054 CREBZFQ9NS37 354 aa14.34□□□□□ -0.11
SH3GL3-206ENST00000564054 ZRANB1Q9UGI0 708 aa14.28□□□□□ -0.12
SH3GL3-206ENST00000564054 LHX8Q68G74 356 aa14.24□□□□□ -0.13
SH3GL3-206ENST00000564054 PAK3O75914 559 aaPredicted RBP14.23□□□□□ -0.13
SH3GL3-206ENST00000564054 ZNF579Q8NAF0 562 aaKnown RBP14.23□□□□□ -0.13
SH3GL3-206ENST00000564054 DCBLD2Q96PD2 775 aa14.21□□□□□ -0.13
SH3GL3-206ENST00000564054 NPM1P06748 294 aaKnown RBP eCLIP14.2□□□□□ -0.14
SH3GL3-206ENST00000564054 POTEIP0CG38 1075 aa14.15□□□□□ -0.14
SH3GL3-206ENST00000564054 GALR2O43603 387 aaPredicted RBP14.05□□□□□ -0.16
SH3GL3-206ENST00000564054 MNX1P50219 401 aaPredicted RBP14.05□□□□□ -0.16
SH3GL3-206ENST00000564054 PROM2Q8N271 834 aa14.03□□□□□ -0.16
SH3GL3-206ENST00000564054 PHF12Q96QT6 1004 aa14.02□□□□□ -0.17
SH3GL3-206ENST00000564054 PLEKHG5O94827 1062 aa13.98□□□□□ -0.17
SH3GL3-206ENST00000564054 TSPYL2Q9H2G4 693 aaPredicted RBP13.9□□□□□ -0.18
SH3GL3-206ENST00000564054 MIER1Q8N108 512 aa13.89□□□□□ -0.19
SH3GL3-206ENST00000564054 MS4A3Q96HJ5 214 aa13.84□□□□□ -0.19
SH3GL3-206ENST00000564054 PLCD3Q8N3E9 789 aa13.79□□□□□ -0.2
SH3GL3-206ENST00000564054 CCDC61Q9Y6R9 512 aa13.78□□□□□ -0.2
SH3GL3-206ENST00000564054 ASTLQ6HA08 431 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms