RNA–Protein interactions for RNA: ENST00000562046.1

CNOT1-203, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-203ENST00000562046 NSD1Q96L73 2696 aaPredicted RBP0.43□□□□□ -2.34
CNOT1-203ENST00000562046 HRNRQ86YZ3 2850 aaPredicted RBP0.43□□□□□ -2.34
CNOT1-203ENST00000562046 NBEAL2Q6ZNJ1 2754 aa0.42□□□□□ -2.34
CNOT1-203ENST00000562046 DNAH6Q9C0G6 4158 aa0.42□□□□□ -2.34
CNOT1-203ENST00000562046 USP9YO00507 2555 aaPredicted RBP0.42□□□□□ -2.34
CNOT1-203ENST00000562046 KRTAP6-2Q3LI66 62 aa0.42□□□□□ -2.34
CNOT1-203ENST00000562046 DNAH1Q9P2D7 4330 aa0.42□□□□□ -2.34
CNOT1-203ENST00000562046 SPG11Q96JI7 2443 aa0.42□□□□□ -2.34
CNOT1-203ENST00000562046 DNAH9Q9NYC9 4486 aa0.41□□□□□ -2.34
CNOT1-203ENST00000562046 LRP1BQ9NZR2 4599 aa0.41□□□□□ -2.34
CNOT1-203ENST00000562046 RELNP78509 3460 aa0.41□□□□□ -2.34
CNOT1-203ENST00000562046 MT1AP04731 61 aa0.41□□□□□ -2.34
CNOT1-203ENST00000562046 APOBP04114 4563 aaKnown RBP0.41□□□□□ -2.34
CNOT1-203ENST00000562046 FLNBO75369 2602 aaKnown RBP0.41□□□□□ -2.34
CNOT1-203ENST00000562046 FAT3Q8TDW7 4589 aa0.41□□□□□ -2.34
CNOT1-203ENST00000562046 FLGP20930 4061 aaPredicted RBP0.41□□□□□ -2.34
CNOT1-203ENST00000562046 ANKRD11Q6UB99 2663 aaPredicted RBP0.41□□□□□ -2.34
CNOT1-203ENST00000562046 UBR4Q5T4S7 5183 aa0.4□□□□□ -2.34
CNOT1-203ENST00000562046 NCOR2Q9Y618 2525 aa0.4□□□□□ -2.34
CNOT1-203ENST00000562046 DNAH10Q8IVF4 4471 aa0.4□□□□□ -2.35
CNOT1-203ENST00000562046 ITPR3Q14573 2671 aa0.4□□□□□ -2.35
CNOT1-203ENST00000562046 H3BUX3 64 aa0.4□□□□□ -2.35
CNOT1-203ENST00000562046 SPRR2AP35326 72 aa0.4□□□□□ -2.35
CNOT1-203ENST00000562046 RHPN1-AS1Q9BWJ2 59 aa0.4□□□□□ -2.35
CNOT1-203ENST00000562046 SPTBN5Q9NRC6 3674 aaKnown RBP0.39□□□□□ -2.35
CNOT1-203ENST00000562046 SMR3BP02814 79 aaPredicted RBP0.39□□□□□ -2.35
CNOT1-203ENST00000562046 KRTAP19-5Q3LI72 72 aa0.39□□□□□ -2.35
CNOT1-203ENST00000562046 ZANQ9Y493 2812 aa0.39□□□□□ -2.35
CNOT1-203ENST00000562046 LAMA5O15230 3695 aa0.39□□□□□ -2.35
CNOT1-203ENST00000562046 A0A096LNI7 61 aa0.38□□□□□ -2.35
CNOT1-203ENST00000562046 DEFB1P60022 68 aa0.38□□□□□ -2.35
CNOT1-203ENST00000562046 CACNA1AO00555 2505 aa0.38□□□□□ -2.35
CNOT1-203ENST00000562046 TLN2Q9Y4G6 2542 aa0.38□□□□□ -2.35
CNOT1-203ENST00000562046 AKAP9Q99996 3911 aa0.38□□□□□ -2.35
CNOT1-203ENST00000562046 FAT1Q14517 4588 aa0.38□□□□□ -2.35
CNOT1-203ENST00000562046 CFAP54Q96N23 3096 aa0.37□□□□□ -2.35
CNOT1-203ENST00000562046 APELAP0DMC3 54 aa0.37□□□□□ -2.35
CNOT1-203ENST00000562046 HIVEP1P15822 2718 aa0.37□□□□□ -2.35
CNOT1-203ENST00000562046 TRIOO75962 3097 aa0.36□□□□□ -2.35
CNOT1-203ENST00000562046 KALRNO60229 2985 aa0.36□□□□□ -2.35
CNOT1-203ENST00000562046 DEFB136Q30KP8 78 aa0.36□□□□□ -2.35
CNOT1-203ENST00000562046 CEP250Q9BV73 2442 aa0.36□□□□□ -2.35
CNOT1-203ENST00000562046 HMCN2Q8NDA2 5059 aa0.36□□□□□ -2.35
CNOT1-203ENST00000562046 MYO18BQ8IUG5 2567 aa0.36□□□□□ -2.35
CNOT1-203ENST00000562046 DMXL2Q8TDJ6 3036 aa0.35□□□□□ -2.35
CNOT1-203ENST00000562046 UTP20O75691 2785 aaKnown RBP0.35□□□□□ -2.35
CNOT1-203ENST00000562046 NBEAQ8NFP9 2946 aa0.35□□□□□ -2.35
CNOT1-203ENST00000562046 PLECQ15149 4684 aaKnown RBP0.35□□□□□ -2.35
CNOT1-203ENST00000562046 PKHD1P08F94 4074 aa0.35□□□□□ -2.35
CNOT1-203ENST00000562046 SPRR2EP22531 72 aa0.35□□□□□ -2.35
CNOT1-203ENST00000562046 DEFB124Q8NES8 71 aa0.35□□□□□ -2.35
CNOT1-203ENST00000562046 SPRR2FQ96RM1 72 aa0.35□□□□□ -2.35
CNOT1-203ENST00000562046 SVEP1Q4LDE5 3571 aa0.35□□□□□ -2.35
CNOT1-203ENST00000562046 FASNP49327 2511 aaKnown RBP0.34□□□□□ -2.35
CNOT1-203ENST00000562046 SSPOA2VEC9 5147 aa0.34□□□□□ -2.35
CNOT1-203ENST00000562046 TEP1Q99973 2627 aaKnown RBP0.34□□□□□ -2.36
CNOT1-203ENST00000562046 KMT2CQ8NEZ4 4911 aaKnown RBP0.34□□□□□ -2.36
CNOT1-203ENST00000562046 CSMD1Q96PZ7 3565 aa0.34□□□□□ -2.36
CNOT1-203ENST00000562046 TGP01266 2768 aa0.33□□□□□ -2.36
CNOT1-203ENST00000562046 MAST4O15021 2626 aa0.33□□□□□ -2.36
CNOT1-203ENST00000562046 ATMQ13315 3056 aa0.33□□□□□ -2.36
CNOT1-203ENST00000562046 USP9XQ93008 2570 aaPredicted RBP0.33□□□□□ -2.36
CNOT1-203ENST00000562046 KIAA1109Q2LD37 5005 aa0.32□□□□□ -2.36
CNOT1-203ENST00000562046 LAMA3Q16787 3333 aa0.32□□□□□ -2.36
CNOT1-203ENST00000562046 HTN1P15515 57 aa0.32□□□□□ -2.36
CNOT1-203ENST00000562046 CMYA5Q8N3K9 4069 aa0.32□□□□□ -2.36
CNOT1-203ENST00000562046 LAMA1P25391 3075 aa0.32□□□□□ -2.36
CNOT1-203ENST00000562046 HTTP42858 3142 aa0.31□□□□□ -2.36
CNOT1-203ENST00000562046 C5orf42Q9H799 3197 aa0.31□□□□□ -2.36
CNOT1-203ENST00000562046 IGSF10Q6WRI0 2623 aa0.31□□□□□ -2.36
CNOT1-203ENST00000562046 FRYLO94915 3013 aa0.3□□□□□ -2.36
CNOT1-203ENST00000562046 FAT4Q6V0I7 4981 aa0.3□□□□□ -2.36
CNOT1-203ENST00000562046 ADGRG4Q8IZF6 3080 aa0.3□□□□□ -2.36
CNOT1-203ENST00000562046 HERC1Q15751 4861 aa0.3□□□□□ -2.36
CNOT1-203ENST00000562046 LRBAP50851 2863 aa0.3□□□□□ -2.36
CNOT1-203ENST00000562046 ITPR1Q14643 2758 aa0.29□□□□□ -2.36
CNOT1-203ENST00000562046 WDR87Q6ZQQ6 2873 aa0.29□□□□□ -2.36
CNOT1-203ENST00000562046 DNAH5Q8TE73 4624 aa0.29□□□□□ -2.36
CNOT1-203ENST00000562046 FLNAP21333 2647 aaKnown RBP0.29□□□□□ -2.36
CNOT1-203ENST00000562046 DYNC1H1Q14204 4646 aaKnown RBP0.28□□□□□ -2.36
CNOT1-203ENST00000562046 PRUNE2Q8WUY3 3088 aa0.28□□□□□ -2.36
CNOT1-203ENST00000562046 MXRA5Q9NR99 2828 aa0.28□□□□□ -2.36
CNOT1-203ENST00000562046 MGAM2Q2M2H8 2515 aa0.28□□□□□ -2.36
CNOT1-203ENST00000562046 SZT2Q5T011 3432 aa0.28□□□□□ -2.37
CNOT1-203ENST00000562046 DOPEY1Q5JWR5 2465 aa0.27□□□□□ -2.37
CNOT1-203ENST00000562046 DNAH17Q9UFH2 4485 aa0.27□□□□□ -2.37
CNOT1-203ENST00000562046 RYR2Q92736 4967 aa0.26□□□□□ -2.37
CNOT1-203ENST00000562046 DEFB133Q30KQ1 61 aa0.26□□□□□ -2.37
CNOT1-203ENST00000562046 SPTAN1Q13813 2472 aaKnown RBP0.26□□□□□ -2.37
CNOT1-203ENST00000562046 TEX15Q9BXT5 2789 aa0.26□□□□□ -2.37
CNOT1-203ENST00000562046 SMG1Q96Q15 3661 aaKnown RBP0.26□□□□□ -2.37
CNOT1-203ENST00000562046 TRRAPQ9Y4A5 3859 aa0.26□□□□□ -2.37
CNOT1-203ENST00000562046 LRP2P98164 4655 aa0.25□□□□□ -2.37
CNOT1-203ENST00000562046 DNAH12Q6ZR08 3092 aa0.25□□□□□ -2.37
CNOT1-203ENST00000562046 MUC17Q685J3 4493 aa0.25□□□□□ -2.37
CNOT1-203ENST00000562046 NIPBLQ6KC79 2804 aaeCLIP0.24□□□□□ -2.37
CNOT1-203ENST00000562046 STATHP02808 62 aa0.24□□□□□ -2.37
CNOT1-203ENST00000562046 RPS29P62273 56 aaKnown RBP0.24□□□□□ -2.37
CNOT1-203ENST00000562046 MAP1AP78559 2803 aaPredicted RBP0.24□□□□□ -2.37
CNOT1-203ENST00000562046 CSMD2Q7Z408 3487 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms