RNA–Protein interactions for RNA: ENST00000562046.1

CNOT1-203, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-203ENST00000562046 AEBP2Q6ZN18 517 aaPredicted RBP21.38■■□□□ 1.01
CNOT1-203ENST00000562046 CHIC1Q5VXU3 224 aa21.16■□□□□ 0.98
CNOT1-203ENST00000562046 PHF23Q9BUL5 403 aaPredicted RBP18.69■□□□□ 0.58
CNOT1-203ENST00000562046 SENP3Q9H4L4 574 aaPredicted RBP18.01■□□□□ 0.47
CNOT1-203ENST00000562046 PLPPR3Q6T4P5 718 aa17.28■□□□□ 0.36
CNOT1-203ENST00000562046 FOXD1Q16676 465 aa16.72■□□□□ 0.27
CNOT1-203ENST00000562046 PPP6R1Q9UPN7 881 aa16.38■□□□□ 0.21
CNOT1-203ENST00000562046 ADRA2BP18089 450 aa16.34■□□□□ 0.21
CNOT1-203ENST00000562046 PIAS4Q8N2W9 510 aaPredicted RBP15.79■□□□□ 0.12
CNOT1-203ENST00000562046 KCNA4P22459 653 aa15.32■□□□□ 0.04
CNOT1-203ENST00000562046 PPP4R3CPQ6ZMV5 832 aa15.29■□□□□ 0.04
CNOT1-203ENST00000562046 MSH5O43196 834 aa15.24■□□□□ 0.03
CNOT1-203ENST00000562046 NCBP3Q53F19 620 aaKnown RBP14.93□□□□□ -0.02
CNOT1-203ENST00000562046 SCAF1Q9H7N4 1312 aaKnown RBP14.88□□□□□ -0.03
CNOT1-203ENST00000562046 NPM3O75607 178 aaKnown RBP14.78□□□□□ -0.04
CNOT1-203ENST00000562046 CNKSR2Q8WXI2 1034 aa14.78□□□□□ -0.04
CNOT1-203ENST00000562046 MAPK8IP2Q13387 824 aaPredicted RBP14.74□□□□□ -0.05
CNOT1-203ENST00000562046 SLC4A1APQ9BWU0 796 aaKnown RBP14.6□□□□□ -0.07
CNOT1-203ENST00000562046 EHMT2Q96KQ7 1210 aa14.53□□□□□ -0.08
CNOT1-203ENST00000562046 DMRT2Q9Y5R5 561 aa14.46□□□□□ -0.09
CNOT1-203ENST00000562046 RNF216Q9NWF9 866 aaPredicted RBP14.43□□□□□ -0.1
CNOT1-203ENST00000562046 DNAJC5BQ9UF47 199 aa14.37□□□□□ -0.11
CNOT1-203ENST00000562046 HOXD11P31277 338 aaPredicted RBP14.32□□□□□ -0.12
CNOT1-203ENST00000562046 CSRNP3Q8WYN3 585 aa14.31□□□□□ -0.12
CNOT1-203ENST00000562046 ZBTB22O15209 634 aa14.14□□□□□ -0.15
CNOT1-203ENST00000562046 FOXD4L1Q9NU39 408 aa13.98□□□□□ -0.17
CNOT1-203ENST00000562046 SLC4A2P04920 1241 aa13.92□□□□□ -0.18
CNOT1-203ENST00000562046 DCAF8L1A6NGE4 600 aa13.7□□□□□ -0.22
CNOT1-203ENST00000562046 MYCNP04198 464 aaPredicted RBP13.61□□□□□ -0.23
CNOT1-203ENST00000562046 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.54□□□□□ -0.24
CNOT1-203ENST00000562046 ATXN8OSP0DMR3 200 aa13.47□□□□□ -0.25
CNOT1-203ENST00000562046 U3KPZ7 1027 aaPredicted RBP13.45□□□□□ -0.26
CNOT1-203ENST00000562046 POTEDQ86YR6 584 aa13.35□□□□□ -0.27
CNOT1-203ENST00000562046 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.3□□□□□ -0.28
CNOT1-203ENST00000562046 HNRNPUL2Q1KMD3 747 aaKnown RBP13.3□□□□□ -0.28
CNOT1-203ENST00000562046 SAMD1Q6SPF0 538 aaPredicted RBP13.28□□□□□ -0.28
CNOT1-203ENST00000562046 ATF5Q9Y2D1 282 aaPredicted RBP13.28□□□□□ -0.28
CNOT1-203ENST00000562046 RNF39Q9H2S5 420 aa13.14□□□□□ -0.31
CNOT1-203ENST00000562046 APLP2Q06481 763 aa13.06□□□□□ -0.32
CNOT1-203ENST00000562046 ZNF219Q9P2Y4 722 aaPredicted RBP12.99□□□□□ -0.33
CNOT1-203ENST00000562046 C1QBPQ07021 282 aaKnown RBP12.97□□□□□ -0.33
CNOT1-203ENST00000562046 SPINK5Q9NQ38 1064 aaPredicted RBP12.96□□□□□ -0.33
CNOT1-203ENST00000562046 TRHP20396 242 aaPredicted RBP12.85□□□□□ -0.35
CNOT1-203ENST00000562046 FKBP8Q14318 412 aa12.85□□□□□ -0.35
CNOT1-203ENST00000562046 CAPN15O75808 1086 aa12.82□□□□□ -0.36
CNOT1-203ENST00000562046 POLA2Q14181 598 aa12.75□□□□□ -0.37
CNOT1-203ENST00000562046 MKRN4PQ13434 485 aaPredicted RBP12.73□□□□□ -0.37
CNOT1-203ENST00000562046 ABCB7O75027 752 aa12.63□□□□□ -0.39
CNOT1-203ENST00000562046 DSG3P32926 999 aa12.61□□□□□ -0.39
CNOT1-203ENST00000562046 FBLN2P98095 1184 aa12.6□□□□□ -0.39
CNOT1-203ENST00000562046 SPDYE4A6NLX3 237 aa12.53□□□□□ -0.4
CNOT1-203ENST00000562046 ZBTB12Q9Y330 459 aaPredicted RBP12.52□□□□□ -0.41
CNOT1-203ENST00000562046 CACNB1Q02641 598 aaPredicted RBP12.49□□□□□ -0.41
CNOT1-203ENST00000562046 PROM2Q8N271 834 aa12.46□□□□□ -0.41
CNOT1-203ENST00000562046 OSCARQ8IYS5 282 aa12.3□□□□□ -0.44
CNOT1-203ENST00000562046 RTN4Q9NQC3 1192 aaKnown RBP12.29□□□□□ -0.44
CNOT1-203ENST00000562046 FBXO3Q9UK99 471 aa12.28□□□□□ -0.44
CNOT1-203ENST00000562046 AMER1Q5JTC6 1135 aaPredicted RBP12.27□□□□□ -0.45
CNOT1-203ENST00000562046 SPDYE2BA6NHP3 402 aa12.25□□□□□ -0.45
CNOT1-203ENST00000562046 SPDYE6P0CI01 402 aa12.25□□□□□ -0.45
CNOT1-203ENST00000562046 SPDYE2Q495Y8 402 aa12.25□□□□□ -0.45
CNOT1-203ENST00000562046 SSUH2Q9Y2M2 353 aa12.23□□□□□ -0.45
CNOT1-203ENST00000562046 ZNF692Q9BU19 519 aaPredicted RBP12.22□□□□□ -0.45
CNOT1-203ENST00000562046 VASPP50552 380 aaPredicted RBP12.14□□□□□ -0.47
CNOT1-203ENST00000562046 PABPN1Q86U42 306 aaKnown RBP eCLIP12.09□□□□□ -0.47
CNOT1-203ENST00000562046 IFNLR1Q8IU57 520 aaPredicted RBP12.03□□□□□ -0.48
CNOT1-203ENST00000562046 STAG3Q9UJ98 1225 aa12□□□□□ -0.49
CNOT1-203ENST00000562046 RBM42Q9BTD8 480 aaKnown RBP11.94□□□□□ -0.5
CNOT1-203ENST00000562046 AKT1S1Q96B36 256 aa11.9□□□□□ -0.5
CNOT1-203ENST00000562046 MIER1Q8N108 512 aa11.82□□□□□ -0.52
CNOT1-203ENST00000562046 PLCD3Q8N3E9 789 aa11.82□□□□□ -0.52
CNOT1-203ENST00000562046 REM2Q8IYK8 340 aaPredicted RBP11.8□□□□□ -0.52
CNOT1-203ENST00000562046 KLHL34Q8N239 644 aa11.79□□□□□ -0.52
CNOT1-203ENST00000562046 SPDYE1Q8NFV5 336 aaPredicted RBP11.79□□□□□ -0.52
CNOT1-203ENST00000562046 SPOCK2Q92563 424 aa11.78□□□□□ -0.52
CNOT1-203ENST00000562046 PKD2Q13563 968 aa11.77□□□□□ -0.53
CNOT1-203ENST00000562046 CLEC11AQ9Y240 323 aa11.69□□□□□ -0.54
CNOT1-203ENST00000562046 PLEKHG5O94827 1062 aa11.66□□□□□ -0.54
CNOT1-203ENST00000562046 ZBTB47Q9UFB7 747 aaPredicted RBP11.66□□□□□ -0.54
CNOT1-203ENST00000562046 PITPNM1O00562 1244 aa11.65□□□□□ -0.54
CNOT1-203ENST00000562046 PRR29P0C7W0 189 aa11.65□□□□□ -0.54
CNOT1-203ENST00000562046 CREBZFQ9NS37 354 aa11.64□□□□□ -0.55
CNOT1-203ENST00000562046 MNX1P50219 401 aaPredicted RBP11.6□□□□□ -0.55
CNOT1-203ENST00000562046 SLC24A1O60721 1099 aa11.59□□□□□ -0.55
CNOT1-203ENST00000562046 ECM2O94769 699 aaPredicted RBP11.56□□□□□ -0.56
CNOT1-203ENST00000562046 NUBP1P53384 320 aa11.56□□□□□ -0.56
CNOT1-203ENST00000562046 CIZ1Q9ULV3 898 aaPredicted RBP11.51□□□□□ -0.57
CNOT1-203ENST00000562046 RGL2O15211 777 aa11.49□□□□□ -0.57
CNOT1-203ENST00000562046 DCAF8L2P0C7V8 631 aa11.45□□□□□ -0.58
CNOT1-203ENST00000562046 GSE1Q14687 1217 aa11.45□□□□□ -0.58
CNOT1-203ENST00000562046 TRIM41Q8WV44 630 aa11.44□□□□□ -0.58
CNOT1-203ENST00000562046 CHADLQ6NUI6 762 aa11.42□□□□□ -0.58
CNOT1-203ENST00000562046 RASEFQ8IZ41 740 aa11.42□□□□□ -0.58
CNOT1-203ENST00000562046 FXR2P51116 673 aaKnown RBP eCLIP11.4□□□□□ -0.584e-10■■■□□ 18.6
CNOT1-203ENST00000562046 DCAF8Q5TAQ9 597 aa11.4□□□□□ -0.58
CNOT1-203ENST00000562046 NPM1P06748 294 aaKnown RBP eCLIP11.39□□□□□ -0.59
CNOT1-203ENST00000562046 FAM212AQ96EL1 285 aa11.38□□□□□ -0.59
CNOT1-203ENST00000562046 PLCB2Q00722 1185 aa11.37□□□□□ -0.59
CNOT1-203ENST00000562046 RNF25Q96BH1 459 aaPredicted RBP11.37□□□□□ -0.59
CNOT1-203ENST00000562046 FARP1Q9Y4F1 1045 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms