RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 HRES1P13985 223 aa6.3□□□□□ -1.4
AC087878.1-201ENST00000560709 ACYP2P14621 99 aa6.29□□□□□ -1.4
AC087878.1-201ENST00000560709 PCLOQ9Y6V0 5065 aa6.27□□□□□ -1.41
AC087878.1-201ENST00000560709 SMIM26A0A096LP01 95 aa6.27□□□□□ -1.41
AC087878.1-201ENST00000560709 SEC61BP60468 96 aaKnown RBP6.27□□□□□ -1.41
AC087878.1-201ENST00000560709 SPINK7P58062 85 aa6.26□□□□□ -1.41
AC087878.1-201ENST00000560709 A8MUN3 132 aa6.25□□□□□ -1.41
AC087878.1-201ENST00000560709 DMAC1Q96GE9 116 aa6.24□□□□□ -1.41
AC087878.1-201ENST00000560709 COA5Q86WW8 74 aa6.21□□□□□ -1.42
AC087878.1-201ENST00000560709 V9GYY9 64 aa6.19□□□□□ -1.42
AC087878.1-201ENST00000560709 CHKB-CPT1BH3BT56 60 aa6.18□□□□□ -1.42
AC087878.1-201ENST00000560709 C4orf26Q17RF5 130 aa6.15□□□□□ -1.42
AC087878.1-201ENST00000560709 COX6B2Q6YFQ2 88 aa6.13□□□□□ -1.43
AC087878.1-201ENST00000560709 SPTSSBQ8NFR3 76 aa6.13□□□□□ -1.43
AC087878.1-201ENST00000560709 Q1T7F1 81 aa6.11□□□□□ -1.43
AC087878.1-201ENST00000560709 RBM12B-AS1Q9P1G2 102 aa6.1□□□□□ -1.43
AC087878.1-201ENST00000560709 HMCN2Q8NDA2 5059 aa6.07□□□□□ -1.44
AC087878.1-201ENST00000560709 MPLKIPQ8TAP9 179 aa6.07□□□□□ -1.44
AC087878.1-201ENST00000560709 LRP2P98164 4655 aa6.07□□□□□ -1.44
AC087878.1-201ENST00000560709 LPAP08519 4548 aa6.06□□□□□ -1.44
AC087878.1-201ENST00000560709 HERC1Q15751 4861 aa6.04□□□□□ -1.44
AC087878.1-201ENST00000560709 MUC17Q685J3 4493 aa6.03□□□□□ -1.44
AC087878.1-201ENST00000560709 KRTAP3-1Q9BYR8 98 aa6.02□□□□□ -1.45
AC087878.1-201ENST00000560709 LINC01558Q9Y6Z2 57 aa6.02□□□□□ -1.45
AC087878.1-201ENST00000560709 PRR15LQ9BU68 103 aa6□□□□□ -1.45
AC087878.1-201ENST00000560709 H1FX-AS1Q4G0G2 97 aa5.99□□□□□ -1.45
AC087878.1-201ENST00000560709 SEC61GP60059 68 aa5.96□□□□□ -1.46
AC087878.1-201ENST00000560709 KRTAP4-1Q9BYQ7 146 aa5.95□□□□□ -1.46
AC087878.1-201ENST00000560709 S4R3F8 94 aa5.94□□□□□ -1.46
AC087878.1-201ENST00000560709 A0A1B0GU69 56 aa5.93□□□□□ -1.46
AC087878.1-201ENST00000560709 PSPHP1O15172 72 aa5.92□□□□□ -1.46
AC087878.1-201ENST00000560709 Q5VV11 94 aa5.87□□□□□ -1.47
AC087878.1-201ENST00000560709 LCA10Q71F78 164 aa5.87□□□□□ -1.47
AC087878.1-201ENST00000560709 CSAG1Q6PB30 78 aa5.85□□□□□ -1.47
AC087878.1-201ENST00000560709 A6NED7 52 aa5.82□□□□□ -1.48
AC087878.1-201ENST00000560709 KRTAP19-2Q3LHN2 52 aa5.82□□□□□ -1.48
AC087878.1-201ENST00000560709 UQCR11O14957 56 aa5.79□□□□□ -1.48
AC087878.1-201ENST00000560709 BRK1Q8WUW1 75 aa5.77□□□□□ -1.49
AC087878.1-201ENST00000560709 UBR4Q5T4S7 5183 aa5.75□□□□□ -1.49
AC087878.1-201ENST00000560709 H0YAA0 97 aa5.74□□□□□ -1.49
AC087878.1-201ENST00000560709 A0A1B0GU33 70 aa5.73□□□□□ -1.49
AC087878.1-201ENST00000560709 LCE4AQ5TA78 99 aa5.73□□□□□ -1.49
AC087878.1-201ENST00000560709 RNF213Q63HN8 5207 aa5.73□□□□□ -1.49
AC087878.1-201ENST00000560709 CDC42SE1Q9NRR8 79 aa5.72□□□□□ -1.49
AC087878.1-201ENST00000560709 PRO0628Q9UI54 55 aa5.71□□□□□ -1.5
AC087878.1-201ENST00000560709 MIR22HGQ0VDD5 57 aa5.69□□□□□ -1.5
AC087878.1-201ENST00000560709 SPATA8Q6RVD6 105 aa5.69□□□□□ -1.5
AC087878.1-201ENST00000560709 LCE5AQ5TCM9 118 aa5.68□□□□□ -1.5
AC087878.1-201ENST00000560709 MUC2Q02817 5179 aa5.66□□□□□ -1.5
AC087878.1-201ENST00000560709 ADM2Q7Z4H4 148 aa5.65□□□□□ -1.5
AC087878.1-201ENST00000560709 FLGP20930 4061 aaPredicted RBP5.64□□□□□ -1.51
AC087878.1-201ENST00000560709 KRTAP10-6P60371 365 aaPredicted RBP5.63□□□□□ -1.51
AC087878.1-201ENST00000560709 MT1HP80294 61 aa5.62□□□□□ -1.51
AC087878.1-201ENST00000560709 M0R2T5 61 aa5.6□□□□□ -1.51
AC087878.1-201ENST00000560709 M0QZ58 72 aa5.59□□□□□ -1.51
AC087878.1-201ENST00000560709 P0C880 135 aa5.57□□□□□ -1.52
AC087878.1-201ENST00000560709 K7ERS5 55 aa5.55□□□□□ -1.52
AC087878.1-201ENST00000560709 FAT4Q6V0I7 4981 aa5.54□□□□□ -1.52
AC087878.1-201ENST00000560709 CRIPTQ9P021 101 aa5.53□□□□□ -1.52
AC087878.1-201ENST00000560709 PMAIP1Q13794 54 aa5.5□□□□□ -1.53
AC087878.1-201ENST00000560709 A8MU10 97 aa5.49□□□□□ -1.53
AC087878.1-201ENST00000560709 R4GN34 69 aa5.49□□□□□ -1.53
AC087878.1-201ENST00000560709 KRTAP9-7A8MTY7 169 aa5.48□□□□□ -1.53
AC087878.1-201ENST00000560709 KRTAP13-4Q3LI77 160 aa5.43□□□□□ -1.54
AC087878.1-201ENST00000560709 A0A0D9SG42 100 aa5.41□□□□□ -1.54
AC087878.1-201ENST00000560709 A6NN06 94 aa5.38□□□□□ -1.55
AC087878.1-201ENST00000560709 MT2AP02795 61 aa5.38□□□□□ -1.55
AC087878.1-201ENST00000560709 KRTAP19-4Q3LI73 84 aa5.38□□□□□ -1.55
AC087878.1-201ENST00000560709 KRTAP10-10P60014 251 aa5.36□□□□□ -1.55
AC087878.1-201ENST00000560709 MT1FP04733 61 aa5.34□□□□□ -1.55
AC087878.1-201ENST00000560709 SVIPQ8NHG7 77 aa5.34□□□□□ -1.55
AC087878.1-201ENST00000560709 KRTAP9-3Q9BYQ3 159 aa5.34□□□□□ -1.55
AC087878.1-201ENST00000560709 LINC01554Q52M75 96 aa5.33□□□□□ -1.56
AC087878.1-201ENST00000560709 SPINT4Q6UDR6 99 aa5.33□□□□□ -1.56
AC087878.1-201ENST00000560709 H3BS24 57 aa5.32□□□□□ -1.56
AC087878.1-201ENST00000560709 SPRR2GQ9BYE4 73 aa5.32□□□□□ -1.56
AC087878.1-201ENST00000560709 KRTAP12-1P59990 96 aa5.3□□□□□ -1.56
AC087878.1-201ENST00000560709 KTN1-AS1Q86SY8 53 aa5.28□□□□□ -1.56
AC087878.1-201ENST00000560709 KRTAP12-2P59991 146 aa5.26□□□□□ -1.57
AC087878.1-201ENST00000560709 ROMO1P60602 79 aa5.22□□□□□ -1.57
AC087878.1-201ENST00000560709 KRTAP19-8Q3LI54 63 aa5.19□□□□□ -1.58
AC087878.1-201ENST00000560709 PLAC4Q8WY50 150 aa5.19□□□□□ -1.58
AC087878.1-201ENST00000560709 CAMK2N1Q7Z7J9 78 aa5.17□□□□□ -1.58
AC087878.1-201ENST00000560709 MT1BP07438 61 aa5.06□□□□□ -1.6
AC087878.1-201ENST00000560709 KRTAP25-1Q3LHN0 102 aa5.01□□□□□ -1.61
AC087878.1-201ENST00000560709 PRAC1Q96KF2 57 aa5.01□□□□□ -1.61
AC087878.1-201ENST00000560709 C10orf95Q9H7T3 257 aa5□□□□□ -1.61
AC087878.1-201ENST00000560709 PRO2289Q9P1D8 64 aa4.98□□□□□ -1.61
AC087878.1-201ENST00000560709 TNP1P09430 55 aa4.95□□□□□ -1.62
AC087878.1-201ENST00000560709 MT1XP80297 61 aa4.89□□□□□ -1.63
AC087878.1-201ENST00000560709 PP632Q6XCG6 107 aa4.89□□□□□ -1.63
AC087878.1-201ENST00000560709 KRTAP10-5P60370 271 aa4.88□□□□□ -1.63
AC087878.1-201ENST00000560709 KRTAP23-1A1A580 65 aa4.87□□□□□ -1.63
AC087878.1-201ENST00000560709 USH2AO75445 5202 aa4.85□□□□□ -1.63
AC087878.1-201ENST00000560709 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.84□□□□□ -1.63
AC087878.1-201ENST00000560709 KRTAP19-6Q3LI70 58 aa4.81□□□□□ -1.64
AC087878.1-201ENST00000560709 FSIP2Q5CZC0 6907 aa4.7□□□□□ -1.66
AC087878.1-201ENST00000560709 KRTAP10-12P60413 245 aa4.69□□□□□ -1.66
AC087878.1-201ENST00000560709 SSPOA2VEC9 5147 aa4.68□□□□□ -1.66
AC087878.1-201ENST00000560709 KRTAP10-7P60409 375 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms