RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 TNP1P09430 55 aa0.6□□□□□ -2.31
SPG11-206ENST00000558093 KRTAP2-3P0C7H8 128 aa0.6□□□□□ -2.31
SPG11-206ENST00000558093 KRTAP2-4Q9BYR9 128 aa0.6□□□□□ -2.31
SPG11-206ENST00000558093 KRTAP2-1Q9BYU5 128 aa0.6□□□□□ -2.31
SPG11-206ENST00000558093 MAP1BP46821 2468 aaKnown RBP0.6□□□□□ -2.31
SPG11-206ENST00000558093 RIF1Q5UIP0 2472 aaKnown RBP0.6□□□□□ -2.31
SPG11-206ENST00000558093 TEX15Q9BXT5 2789 aa0.6□□□□□ -2.31
SPG11-206ENST00000558093 TACC2O95359 2948 aa0.6□□□□□ -2.31
SPG11-206ENST00000558093 ZFYVE26Q68DK2 2539 aa0.6□□□□□ -2.31
SPG11-206ENST00000558093 USP9YO00507 2555 aaPredicted RBP0.59□□□□□ -2.31
SPG11-206ENST00000558093 NBEAL2Q6ZNJ1 2754 aa0.59□□□□□ -2.31
SPG11-206ENST00000558093 ITPR3Q14573 2671 aa0.59□□□□□ -2.31
SPG11-206ENST00000558093 LRRK2Q5S007 2527 aa0.59□□□□□ -2.31
SPG11-206ENST00000558093 NCOR2Q9Y618 2525 aa0.59□□□□□ -2.31
SPG11-206ENST00000558093 DNAH3Q8TD57 4116 aa0.59□□□□□ -2.31
SPG11-206ENST00000558093 DEFB1P60022 68 aa0.59□□□□□ -2.31
SPG11-206ENST00000558093 CSMD1Q96PZ7 3565 aa0.58□□□□□ -2.32
SPG11-206ENST00000558093 CFAP46Q8IYW2 2715 aa0.58□□□□□ -2.32
SPG11-206ENST00000558093 ACANP16112 2415 aa0.58□□□□□ -2.32
SPG11-206ENST00000558093 PCLOQ9Y6V0 5065 aa0.58□□□□□ -2.32
SPG11-206ENST00000558093 LOC400499M0QZD8 3231 aa0.58□□□□□ -2.32
SPG11-206ENST00000558093 SPART-AS1P0CW21 52 aa0.58□□□□□ -2.32
SPG11-206ENST00000558093 U3KQA8 63 aa0.58□□□□□ -2.32
SPG11-206ENST00000558093 DNAH7Q8WXX0 4024 aa0.58□□□□□ -2.32
SPG11-206ENST00000558093 LAMA5O15230 3695 aa0.58□□□□□ -2.32
SPG11-206ENST00000558093 KALRNO60229 2985 aa0.58□□□□□ -2.32
SPG11-206ENST00000558093 PKD1P98161 4303 aa0.58□□□□□ -2.32
SPG11-206ENST00000558093 DNAH12Q6ZR08 3092 aa0.58□□□□□ -2.32
SPG11-206ENST00000558093 NBEAQ8NFP9 2946 aa0.58□□□□□ -2.32
SPG11-206ENST00000558093 HECTD4Q9Y4D8 3996 aa0.57□□□□□ -2.32
SPG11-206ENST00000558093 IGSF10Q6WRI0 2623 aa0.57□□□□□ -2.32
SPG11-206ENST00000558093 DNAH10Q8IVF4 4471 aa0.57□□□□□ -2.32
SPG11-206ENST00000558093 A0A096LNI7 61 aa0.57□□□□□ -2.32
SPG11-206ENST00000558093 C9orf92A6NGG3 77 aa0.57□□□□□ -2.32
SPG11-206ENST00000558093 DEFB110Q30KQ9 67 aa0.57□□□□□ -2.32
SPG11-206ENST00000558093 KRTAP19-3Q7Z4W3 81 aa0.57□□□□□ -2.32
SPG11-206ENST00000558093 FAM186AA6NE01 2351 aa0.57□□□□□ -2.32
SPG11-206ENST00000558093 ACACBO00763 2458 aa0.57□□□□□ -2.32
SPG11-206ENST00000558093 UBR4Q5T4S7 5183 aa0.57□□□□□ -2.32
SPG11-206ENST00000558093 MTORP42345 2549 aa0.57□□□□□ -2.32
SPG11-206ENST00000558093 AKAP9Q99996 3911 aa0.57□□□□□ -2.32
SPG11-206ENST00000558093 RYR3Q15413 4870 aa0.56□□□□□ -2.32
SPG11-206ENST00000558093 LRBAP50851 2863 aa0.56□□□□□ -2.32
SPG11-206ENST00000558093 COL7A1Q02388 2944 aa0.56□□□□□ -2.32
SPG11-206ENST00000558093 HTN1P15515 57 aa0.56□□□□□ -2.32
SPG11-206ENST00000558093 DEFB136Q30KP8 78 aa0.56□□□□□ -2.32
SPG11-206ENST00000558093 HYDINQ4G0P3 5121 aa0.56□□□□□ -2.32
SPG11-206ENST00000558093 SPG11Q96JI7 2443 aa0.56□□□□□ -2.32
SPG11-206ENST00000558093 CEP250Q9BV73 2442 aa0.56□□□□□ -2.32
SPG11-206ENST00000558093 CUBNO60494 3623 aa0.56□□□□□ -2.32
SPG11-206ENST00000558093 ATMQ13315 3056 aa0.56□□□□□ -2.32
SPG11-206ENST00000558093 FAT3Q8TDW7 4589 aa0.55□□□□□ -2.32
SPG11-206ENST00000558093 WDR87Q6ZQQ6 2873 aa0.55□□□□□ -2.32
SPG11-206ENST00000558093 DNAH1Q9P2D7 4330 aa0.55□□□□□ -2.32
SPG11-206ENST00000558093 DNAH6Q9C0G6 4158 aa0.55□□□□□ -2.32
SPG11-206ENST00000558093 FRYLO94915 3013 aa0.55□□□□□ -2.32
SPG11-206ENST00000558093 DMXL2Q8TDJ6 3036 aa0.55□□□□□ -2.32
SPG11-206ENST00000558093 MYO9AB2RTY4 2548 aa0.55□□□□□ -2.32
SPG11-206ENST00000558093 FREM2Q5SZK8 3169 aa0.55□□□□□ -2.32
SPG11-206ENST00000558093 STATHP02808 62 aa0.55□□□□□ -2.32
SPG11-206ENST00000558093 STAB1Q9NY15 2570 aa0.55□□□□□ -2.32
SPG11-206ENST00000558093 KMT2CQ8NEZ4 4911 aaKnown RBP0.55□□□□□ -2.32
SPG11-206ENST00000558093 FLGP20930 4061 aaPredicted RBP0.55□□□□□ -2.32
SPG11-206ENST00000558093 BOD1L1Q8NFC6 3051 aa0.55□□□□□ -2.32
SPG11-206ENST00000558093 VPS13AQ96RL7 3174 aa0.55□□□□□ -2.32
SPG11-206ENST00000558093 ZANQ9Y493 2812 aa0.55□□□□□ -2.32
SPG11-206ENST00000558093 TRIOO75962 3097 aa0.54□□□□□ -2.32
SPG11-206ENST00000558093 DNAH9Q9NYC9 4486 aa0.54□□□□□ -2.32
SPG11-206ENST00000558093 DOPEY1Q5JWR5 2465 aa0.54□□□□□ -2.32
SPG11-206ENST00000558093 EPPK1P58107 5090 aaKnown RBP0.54□□□□□ -2.32
SPG11-206ENST00000558093 H3BUX3 64 aa0.54□□□□□ -2.32
SPG11-206ENST00000558093 RHPN1-AS1Q9BWJ2 59 aa0.54□□□□□ -2.32
SPG11-206ENST00000558093 NSD1Q96L73 2696 aaPredicted RBP0.54□□□□□ -2.32
SPG11-206ENST00000558093 HIVEP1P15822 2718 aa0.53□□□□□ -2.32
SPG11-206ENST00000558093 LRP1Q07954 4544 aaKnown RBP0.53□□□□□ -2.32
SPG11-206ENST00000558093 APOBP04114 4563 aaKnown RBP0.53□□□□□ -2.32
SPG11-206ENST00000558093 ANKHD1Q8IWZ3 2542 aaKnown RBP0.53□□□□□ -2.32
SPG11-206ENST00000558093 CEP295Q9C0D2 2601 aa0.53□□□□□ -2.32
SPG11-206ENST00000558093 CSMD2Q7Z408 3487 aa0.53□□□□□ -2.32
SPG11-206ENST00000558093 BIRC6Q9NR09 4857 aa0.53□□□□□ -2.32
SPG11-206ENST00000558093 UTP20O75691 2785 aaKnown RBP0.52□□□□□ -2.33
SPG11-206ENST00000558093 SYNE1Q8NF91 8797 aaKnown RBP0.52□□□□□ -2.33
SPG11-206ENST00000558093 TLN1Q9Y490 2541 aaKnown RBP0.52□□□□□ -2.33
SPG11-206ENST00000558093 NBEAL1Q6ZS30 2694 aa0.51□□□□□ -2.33
SPG11-206ENST00000558093 ITPR2Q14571 2701 aa0.51□□□□□ -2.33
SPG11-206ENST00000558093 VPS13CQ709C8 3753 aa0.51□□□□□ -2.33
SPG11-206ENST00000558093 HRNRQ86YZ3 2850 aaPredicted RBP0.51□□□□□ -2.33
SPG11-206ENST00000558093 ADGRG4Q8IZF6 3080 aa0.51□□□□□ -2.33
SPG11-206ENST00000558093 RYR2Q92736 4967 aa0.51□□□□□ -2.33
SPG11-206ENST00000558093 HERC2O95714 4834 aa0.51□□□□□ -2.33
SPG11-206ENST00000558093 MXRA5Q9NR99 2828 aa0.51□□□□□ -2.33
SPG11-206ENST00000558093 TLN2Q9Y4G6 2542 aa0.5□□□□□ -2.33
SPG11-206ENST00000558093 SVEP1Q4LDE5 3571 aa0.5□□□□□ -2.33
SPG11-206ENST00000558093 MUC2Q02817 5179 aa0.49□□□□□ -2.33
SPG11-206ENST00000558093 FLNAP21333 2647 aaKnown RBP0.49□□□□□ -2.33
SPG11-206ENST00000558093 FAT1Q14517 4588 aa0.49□□□□□ -2.33
SPG11-206ENST00000558093 SONP18583 2426 aaKnown RBP0.49□□□□□ -2.33
SPG11-206ENST00000558093 PLECQ15149 4684 aaKnown RBP0.49□□□□□ -2.33
SPG11-206ENST00000558093 RYR1P21817 5038 aa0.49□□□□□ -2.33
SPG11-206ENST00000558093 SPTAN1Q13813 2472 aaKnown RBP0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms