RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, humanhuman

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-223ENST00000555573 NBPF19A0A087WUL8 3843 aa-0.08□□□□□ -2.42
KTN1-223ENST00000555573 HERC2O95714 4834 aa-0.09□□□□□ -2.42
KTN1-223ENST00000555573 MMP24-AS1A0A0U1RRL7 71 aa-0.09□□□□□ -2.42
KTN1-223ENST00000555573 MXRA5Q9NR99 2828 aa-0.09□□□□□ -2.42
KTN1-223ENST00000555573 SPRR2FQ96RM1 72 aa-0.1□□□□□ -2.42
KTN1-223ENST00000555573 BIRC6Q9NR09 4857 aa-0.1□□□□□ -2.42
KTN1-223ENST00000555573 M0QY20 66 aa-0.1□□□□□ -2.43
KTN1-223ENST00000555573 ACACBO00763 2458 aa-0.11□□□□□ -2.43
KTN1-223ENST00000555573 APOBP04114 4563 aaKnown RBP-0.11□□□□□ -2.43
KTN1-223ENST00000555573 MYO18BQ8IUG5 2567 aa-0.11□□□□□ -2.43
KTN1-223ENST00000555573 CCDC168Q8NDH2 2452 aa-0.12□□□□□ -2.43
KTN1-223ENST00000555573 TFF3Q07654 80 aa-0.12□□□□□ -2.43
KTN1-223ENST00000555573 VPS13DQ5THJ4 4388 aa-0.12□□□□□ -2.43
KTN1-223ENST00000555573 DNAH6Q9C0G6 4158 aa-0.12□□□□□ -2.43
KTN1-223ENST00000555573 SPTBN5Q9NRC6 3674 aaKnown RBP-0.12□□□□□ -2.43
KTN1-223ENST00000555573 SNRPGP15A8MWD9 76 aa-0.13□□□□□ -2.43
KTN1-223ENST00000555573 TNP1P09430 55 aa-0.13□□□□□ -2.43
KTN1-223ENST00000555573 KRTAP19-7Q3SYF9 63 aa-0.13□□□□□ -2.43
KTN1-223ENST00000555573 LAMA5O15230 3695 aa-0.14□□□□□ -2.43
KTN1-223ENST00000555573 DNHD1Q96M86 4753 aa-0.15□□□□□ -2.43
KTN1-223ENST00000555573 LAMA3Q16787 3333 aa-0.15□□□□□ -2.43
KTN1-223ENST00000555573 LAMA1P25391 3075 aa-0.15□□□□□ -2.43
KTN1-223ENST00000555573 DNAH2Q9P225 4427 aa-0.16□□□□□ -2.43
KTN1-223ENST00000555573 NFAT5O94916 1531 aa-0.16□□□□□ -2.44
KTN1-223ENST00000555573 FAT1Q14517 4588 aa-0.16□□□□□ -2.44
KTN1-223ENST00000555573 DNAH11Q96DT5 4516 aa-0.16□□□□□ -2.44
KTN1-223ENST00000555573 USP9XQ93008 2570 aaPredicted RBP-0.16□□□□□ -2.44
KTN1-223ENST00000555573 MGAM2Q2M2H8 2515 aa-0.17□□□□□ -2.44
KTN1-223ENST00000555573 RELNP78509 3460 aa-0.18□□□□□ -2.44
KTN1-223ENST00000555573 LINC01546A6NGU7 62 aa-0.18□□□□□ -2.44
KTN1-223ENST00000555573 KRTAP19-8Q3LI54 63 aa-0.18□□□□□ -2.44
KTN1-223ENST00000555573 KRTAP20-2Q3LI61 65 aa-0.18□□□□□ -2.44
KTN1-223ENST00000555573 STARD9Q9P2P6 4700 aa-0.18□□□□□ -2.44
KTN1-223ENST00000555573 A8MTW9 85 aa-0.18□□□□□ -2.44
KTN1-223ENST00000555573 MT4P47944 62 aa-0.18□□□□□ -2.44
KTN1-223ENST00000555573 SMIM2Q9BVW6 85 aa-0.18□□□□□ -2.44
KTN1-223ENST00000555573 CLTCL1P53675 1640 aa-0.19□□□□□ -2.44
KTN1-223ENST00000555573 ITPR1Q14643 2758 aa-0.19□□□□□ -2.44
KTN1-223ENST00000555573 IQGAP2Q13576 1575 aa-0.19□□□□□ -2.44
KTN1-223ENST00000555573 TLN2Q9Y4G6 2542 aa-0.19□□□□□ -2.44
KTN1-223ENST00000555573 M0QZ58 72 aa-0.2□□□□□ -2.44
KTN1-223ENST00000555573 DEFB131AP59861 70 aa-0.21□□□□□ -2.44
KTN1-223ENST00000555573 USP9YO00507 2555 aaPredicted RBP-0.21□□□□□ -2.44
KTN1-223ENST00000555573 DNAH1Q9P2D7 4330 aa-0.22□□□□□ -2.44
KTN1-223ENST00000555573 CELSR3Q9NYQ7 3312 aa-0.22□□□□□ -2.44
KTN1-223ENST00000555573 CLPSL2Q6UWE3 100 aa-0.22□□□□□ -2.44
KTN1-223ENST00000555573 WDFY4Q6ZS81 3184 aa-0.23□□□□□ -2.45
KTN1-223ENST00000555573 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.23□□□□□ -2.45
KTN1-223ENST00000555573 ITPR3Q14573 2671 aa-0.23□□□□□ -2.45
KTN1-223ENST00000555573 FRYQ5TBA9 3013 aa-0.24□□□□□ -2.45
KTN1-223ENST00000555573 TRPM2O94759 1503 aa-0.25□□□□□ -2.45
KTN1-223ENST00000555573 DNAH7Q8WXX0 4024 aa-0.25□□□□□ -2.45
KTN1-223ENST00000555573 KRTAP19-6Q3LI70 58 aa-0.27□□□□□ -2.45
KTN1-223ENST00000555573 DNAH8Q96JB1 4490 aa-0.28□□□□□ -2.45
KTN1-223ENST00000555573 KRTAP19-5Q3LI72 72 aa-0.29□□□□□ -2.46
KTN1-223ENST00000555573 NDUFA1O15239 70 aa-0.3□□□□□ -2.46
KTN1-223ENST00000555573 KRTAP8-1Q8IUC2 63 aa-0.3□□□□□ -2.46
KTN1-223ENST00000555573 PLECQ15149 4684 aaKnown RBP-0.3□□□□□ -2.46
KTN1-223ENST00000555573 TOMM5Q8N4H5 51 aa-0.3□□□□□ -2.46
KTN1-223ENST00000555573 MUC17Q685J3 4493 aa-0.31□□□□□ -2.46
KTN1-223ENST00000555573 CHD7Q9P2D1 2997 aa-0.31□□□□□ -2.46
KTN1-223ENST00000555573 POLR2KP53803 58 aaKnown RBP-0.31□□□□□ -2.46
KTN1-223ENST00000555573 DEFB1P60022 68 aa-0.31□□□□□ -2.46
KTN1-223ENST00000555573 C5orf42Q9H799 3197 aa-0.31□□□□□ -2.46
KTN1-223ENST00000555573 ADGRG4Q8IZF6 3080 aa-0.32□□□□□ -2.46
KTN1-223ENST00000555573 DYNC1H1Q14204 4646 aaKnown RBP-0.33□□□□□ -2.46
KTN1-223ENST00000555573 LAMA2P24043 3122 aaKnown RBP-0.34□□□□□ -2.46
KTN1-223ENST00000555573 SMR3BP02814 79 aaPredicted RBP-0.34□□□□□ -2.46
KTN1-223ENST00000555573 MT1HL1P0DM35 61 aa-0.34□□□□□ -2.46
KTN1-223ENST00000555573 SPART-AS1P0CW21 52 aa-0.35□□□□□ -2.47
KTN1-223ENST00000555573 MYO15AQ9UKN7 3530 aa-0.35□□□□□ -2.47
KTN1-223ENST00000555573 CFAP46Q8IYW2 2715 aa-0.36□□□□□ -2.47
KTN1-223ENST00000555573 DNAH5Q8TE73 4624 aa-0.36□□□□□ -2.47
KTN1-223ENST00000555573 MT1HP80294 61 aa-0.36□□□□□ -2.47
KTN1-223ENST00000555573 MGAQ8IWI9 3026 aa-0.37□□□□□ -2.47
KTN1-223ENST00000555573 CEP295Q9C0D2 2601 aa-0.37□□□□□ -2.47
KTN1-223ENST00000555573 SRCAPQ6ZRS2 3230 aa-0.37□□□□□ -2.47
KTN1-223ENST00000555573 SPTAN1Q13813 2472 aaKnown RBP-0.37□□□□□ -2.47
KTN1-223ENST00000555573 CRYBG3Q68DQ2 2970 aa-0.38□□□□□ -2.47
KTN1-223ENST00000555573 ZFHX4Q86UP3 3567 aa-0.38□□□□□ -2.47
KTN1-223ENST00000555573 NIPBLQ6KC79 2804 aaeCLIP-0.38□□□□□ -2.47
KTN1-223ENST00000555573 TLN1Q9Y490 2541 aaKnown RBP-0.38□□□□□ -2.47
KTN1-223ENST00000555573 BOD1L1Q8NFC6 3051 aa-0.38□□□□□ -2.47
KTN1-223ENST00000555573 ATP7AQ04656 1500 aa-0.38□□□□□ -2.47
KTN1-223ENST00000555573 MYO9AB2RTY4 2548 aa-0.38□□□□□ -2.47
KTN1-223ENST00000555573 CSMD1Q96PZ7 3565 aa-0.38□□□□□ -2.47
KTN1-223ENST00000555573 CMYA5Q8N3K9 4069 aa-0.39□□□□□ -2.47
KTN1-223ENST00000555573 EP400Q96L91 3159 aa-0.4□□□□□ -2.47
KTN1-223ENST00000555573 MT1XP80297 61 aa-0.4□□□□□ -2.47
KTN1-223ENST00000555573 UNC80Q8N2C7 3258 aa-0.41□□□□□ -2.47
KTN1-223ENST00000555573 MT1BP07438 61 aa-0.41□□□□□ -2.47
KTN1-223ENST00000555573 TEX15Q9BXT5 2789 aa-0.41□□□□□ -2.48
KTN1-223ENST00000555573 DCHS1Q96JQ0 3298 aa-0.42□□□□□ -2.48
KTN1-223ENST00000555573 DNAH10Q8IVF4 4471 aa-0.42□□□□□ -2.48
KTN1-223ENST00000555573 MT1MQ8N339 61 aa-0.42□□□□□ -2.48
KTN1-223ENST00000555573 MT2AP02795 61 aa-0.43□□□□□ -2.48
KTN1-223ENST00000555573 ITPR2Q14571 2701 aa-0.44□□□□□ -2.48
KTN1-223ENST00000555573 CSMD2Q7Z408 3487 aa-0.44□□□□□ -2.48
KTN1-223ENST00000555573 MT1EP04732 61 aa-0.44□□□□□ -2.48
KTN1-223ENST00000555573 DNAH17Q9UFH2 4485 aa-0.45□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms