RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 KRTAP21-3Q3LHN1 58 aa6.22□□□□□ -1.41
XRCC3-208ENST00000554811 SACSQ9NZJ4 4579 aa6.21□□□□□ -1.41
XRCC3-208ENST00000554811 P0C880 135 aa6.21□□□□□ -1.42
XRCC3-208ENST00000554811 J3QL48 77 aa6.21□□□□□ -1.42
XRCC3-208ENST00000554811 KRTAP25-1Q3LHN0 102 aa6.2□□□□□ -1.42
XRCC3-208ENST00000554811 S4R3F8 94 aa6.18□□□□□ -1.42
XRCC3-208ENST00000554811 APOBP04114 4563 aaKnown RBP6.18□□□□□ -1.42
XRCC3-208ENST00000554811 A0A1B0GVY2 172 aa6.17□□□□□ -1.42
XRCC3-208ENST00000554811 FAT3Q8TDW7 4589 aa6.17□□□□□ -1.42
XRCC3-208ENST00000554811 KRTAP10-8P60410 259 aa6.15□□□□□ -1.42
XRCC3-208ENST00000554811 KMT2CQ8NEZ4 4911 aaKnown RBP6.15□□□□□ -1.43
XRCC3-208ENST00000554811 KRTAP10-4P60372 401 aaPredicted RBP6.13□□□□□ -1.43
XRCC3-208ENST00000554811 RPL37P61927 97 aaKnown RBP6.12□□□□□ -1.43
XRCC3-208ENST00000554811 XP32Q5T750 250 aa6.12□□□□□ -1.43
XRCC3-208ENST00000554811 C10orf95Q9H7T3 257 aa6.1□□□□□ -1.43
XRCC3-208ENST00000554811 KRTAP13-4Q3LI77 160 aa6.07□□□□□ -1.44
XRCC3-208ENST00000554811 KIAA1109Q2LD37 5005 aa6.07□□□□□ -1.44
XRCC3-208ENST00000554811 HSPG2P98160 4391 aa6.02□□□□□ -1.45
XRCC3-208ENST00000554811 KRTAP10-6P60371 365 aaPredicted RBP5.99□□□□□ -1.45
XRCC3-208ENST00000554811 KRTAP3-3Q9BYR6 98 aa5.98□□□□□ -1.45
XRCC3-208ENST00000554811 RYR1P21817 5038 aa5.98□□□□□ -1.45
XRCC3-208ENST00000554811 RYR2Q92736 4967 aa5.97□□□□□ -1.45
XRCC3-208ENST00000554811 RYR3Q15413 4870 aa5.96□□□□□ -1.46
XRCC3-208ENST00000554811 PKHD1L1Q86WI1 4243 aa5.94□□□□□ -1.46
XRCC3-208ENST00000554811 LRP2P98164 4655 aa5.94□□□□□ -1.46
XRCC3-208ENST00000554811 M0QZ58 72 aa5.93□□□□□ -1.46
XRCC3-208ENST00000554811 KRTAP12-2P59991 146 aa5.92□□□□□ -1.46
XRCC3-208ENST00000554811 R4GN34 69 aa5.92□□□□□ -1.46
XRCC3-208ENST00000554811 KRTAP17-1Q9BYP8 105 aa5.91□□□□□ -1.46
XRCC3-208ENST00000554811 KRTAP3-2Q9BYR7 98 aa5.9□□□□□ -1.46
XRCC3-208ENST00000554811 SEC61BP60468 96 aaKnown RBP5.9□□□□□ -1.47
XRCC3-208ENST00000554811 TPRXLQ17RH7 258 aa5.88□□□□□ -1.47
XRCC3-208ENST00000554811 LPAP08519 4548 aa5.87□□□□□ -1.47
XRCC3-208ENST00000554811 KRTAP4-5Q9BYR2 181 aa5.87□□□□□ -1.47
XRCC3-208ENST00000554811 MT1HL1P0DM35 61 aa5.84□□□□□ -1.47
XRCC3-208ENST00000554811 CAMK2N1Q7Z7J9 78 aa5.83□□□□□ -1.48
XRCC3-208ENST00000554811 M0R2T5 61 aa5.79□□□□□ -1.48
XRCC3-208ENST00000554811 KRTAP12-1P59990 96 aa5.78□□□□□ -1.48
XRCC3-208ENST00000554811 TNXBP22105 4242 aa5.78□□□□□ -1.48
XRCC3-208ENST00000554811 EPPK1P58107 5090 aaKnown RBP5.75□□□□□ -1.49
XRCC3-208ENST00000554811 ABCA13Q86UQ4 5058 aa5.71□□□□□ -1.49
XRCC3-208ENST00000554811 LORP23490 312 aaPredicted RBP5.65□□□□□ -1.51
XRCC3-208ENST00000554811 KRTAP15-1Q3LI76 137 aa5.63□□□□□ -1.51
XRCC3-208ENST00000554811 MUC2Q02817 5179 aa5.62□□□□□ -1.51
XRCC3-208ENST00000554811 HERC2O95714 4834 aa5.56□□□□□ -1.52
XRCC3-208ENST00000554811 KRTAP4-1Q9BYQ7 146 aa5.55□□□□□ -1.52
XRCC3-208ENST00000554811 PLAC4Q8WY50 150 aa5.45□□□□□ -1.54
XRCC3-208ENST00000554811 HERC1Q15751 4861 aa5.4□□□□□ -1.55
XRCC3-208ENST00000554811 RNF213Q63HN8 5207 aa5.36□□□□□ -1.55
XRCC3-208ENST00000554811 FAT4Q6V0I7 4981 aa5.36□□□□□ -1.55
XRCC3-208ENST00000554811 TNP1P09430 55 aa5.29□□□□□ -1.56
XRCC3-208ENST00000554811 KRTAP10-10P60014 251 aa5.28□□□□□ -1.56
XRCC3-208ENST00000554811 MUC17Q685J3 4493 aa5.25□□□□□ -1.57
XRCC3-208ENST00000554811 PCLOQ9Y6V0 5065 aa5.25□□□□□ -1.57
XRCC3-208ENST00000554811 BIRC6Q9NR09 4857 aa5.22□□□□□ -1.57
XRCC3-208ENST00000554811 UBR4Q5T4S7 5183 aa5.2□□□□□ -1.58
XRCC3-208ENST00000554811 PP632Q6XCG6 107 aa5.18□□□□□ -1.58
XRCC3-208ENST00000554811 KRTAP19-2Q3LHN2 52 aa5.11□□□□□ -1.59
XRCC3-208ENST00000554811 FLGP20930 4061 aaPredicted RBP5.07□□□□□ -1.6
XRCC3-208ENST00000554811 HMCN2Q8NDA2 5059 aa5.03□□□□□ -1.6
XRCC3-208ENST00000554811 PRO2289Q9P1D8 64 aa4.99□□□□□ -1.61
XRCC3-208ENST00000554811 LCE3AQ5TA76 89 aa4.97□□□□□ -1.61
XRCC3-208ENST00000554811 FSIP2Q5CZC0 6907 aa4.96□□□□□ -1.62
XRCC3-208ENST00000554811 KRTAP19-1Q8IUB9 90 aa4.92□□□□□ -1.62
XRCC3-208ENST00000554811 MT1FP04733 61 aa4.92□□□□□ -1.62
XRCC3-208ENST00000554811 MT1HP80294 61 aa4.92□□□□□ -1.62
XRCC3-208ENST00000554811 LCE2CQ5TA81 110 aa4.92□□□□□ -1.62
XRCC3-208ENST00000554811 MT2AP02795 61 aa4.87□□□□□ -1.63
XRCC3-208ENST00000554811 SPRR2GQ9BYE4 73 aa4.85□□□□□ -1.63
XRCC3-208ENST00000554811 USH2AO75445 5202 aa4.78□□□□□ -1.64
XRCC3-208ENST00000554811 KRTAP10-12P60413 245 aa4.75□□□□□ -1.65
XRCC3-208ENST00000554811 KRTAP9-8Q9BYQ0 159 aa4.72□□□□□ -1.65
XRCC3-208ENST00000554811 KRTAP12-3P60328 96 aa4.71□□□□□ -1.65
XRCC3-208ENST00000554811 KMT2DO14686 5537 aa4.7□□□□□ -1.66
XRCC3-208ENST00000554811 KRTAP23-1A1A580 65 aa4.68□□□□□ -1.66
XRCC3-208ENST00000554811 KRTAP10-7P60409 375 aaPredicted RBP4.67□□□□□ -1.66
XRCC3-208ENST00000554811 MT1BP07438 61 aa4.65□□□□□ -1.66
XRCC3-208ENST00000554811 MT1XP80297 61 aa4.65□□□□□ -1.67
XRCC3-208ENST00000554811 KRTAP10-5P60370 271 aa4.64□□□□□ -1.67
XRCC3-208ENST00000554811 INE1O15225 51 aa4.64□□□□□ -1.67
XRCC3-208ENST00000554811 SPRR5A0A1B0GTR4 108 aa4.59□□□□□ -1.67
XRCC3-208ENST00000554811 KRTAP8-1Q8IUC2 63 aa4.57□□□□□ -1.68
XRCC3-208ENST00000554811 KRTAP19-8Q3LI54 63 aa4.56□□□□□ -1.68
XRCC3-208ENST00000554811 KRTAP19-5Q3LI72 72 aa4.5□□□□□ -1.69
XRCC3-208ENST00000554811 KRTAP4-8A0A0G2JLE6 195 aa4.5□□□□□ -1.69
XRCC3-208ENST00000554811 KRTAP9-3Q9BYQ3 159 aa4.5□□□□□ -1.69
XRCC3-208ENST00000554811 KRTAP4-8Q9BYQ9 185 aa4.5□□□□□ -1.69
XRCC3-208ENST00000554811 CRCT1Q9UGL9 99 aa4.48□□□□□ -1.69
XRCC3-208ENST00000554811 OBSCNQ5VST9 7968 aa4.47□□□□□ -1.69
XRCC3-208ENST00000554811 LCE2BO14633 110 aa4.43□□□□□ -1.7
XRCC3-208ENST00000554811 KRTAP4-7Q9BYR0 210 aa4.37□□□□□ -1.71
XRCC3-208ENST00000554811 LCE3CQ5T5A8 94 aa4.33□□□□□ -1.72
XRCC3-208ENST00000554811 DSTQ03001 7570 aaKnown RBP4.32□□□□□ -1.72
XRCC3-208ENST00000554811 SYNE1Q8NF91 8797 aaKnown RBP4.29□□□□□ -1.72
XRCC3-208ENST00000554811 FCGBPQ9Y6R7 5405 aaPredicted RBP4.2□□□□□ -1.74
XRCC3-208ENST00000554811 LCE2AQ5TA79 106 aaPredicted RBP4.19□□□□□ -1.74
XRCC3-208ENST00000554811 KRTAP9-6A8MVA2 160 aa4.18□□□□□ -1.74
XRCC3-208ENST00000554811 MUC12Q9UKN1 5478 aa4.16□□□□□ -1.74
XRCC3-208ENST00000554811 SSPOA2VEC9 5147 aa4.11□□□□□ -1.75
XRCC3-208ENST00000554811 KRTAP19-7Q3SYF9 63 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms