RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 KRTAP9-6A8MVA2 160 aa1.47□□□□□ -2.17
PRPF39-207ENST00000554439 CIRBP-AS1Q8TBR5 109 aa1.47□□□□□ -2.17
PRPF39-207ENST00000554439 NBDYA0A0U1RRE5 68 aa1.47□□□□□ -2.17
PRPF39-207ENST00000554439 C8orf87E5RJ46 101 aa1.47□□□□□ -2.17
PRPF39-207ENST00000554439 ACYP2P14621 99 aa1.47□□□□□ -2.17
PRPF39-207ENST00000554439 VPS13BQ7Z7G8 4022 aa1.46□□□□□ -2.18
PRPF39-207ENST00000554439 A0A1B0GU69 56 aa1.46□□□□□ -2.18
PRPF39-207ENST00000554439 ZNF861PO60384 105 aa1.46□□□□□ -2.18
PRPF39-207ENST00000554439 DMAC1Q96GE9 116 aa1.46□□□□□ -2.18
PRPF39-207ENST00000554439 TYMSOSQ8TAI1 123 aa1.46□□□□□ -2.18
PRPF39-207ENST00000554439 ZNF706Q9Y5V0 76 aaPredicted RBP1.46□□□□□ -2.18
PRPF39-207ENST00000554439 DNAH5Q8TE73 4624 aa1.46□□□□□ -2.18
PRPF39-207ENST00000554439 FAT2Q9NYQ8 4349 aa1.46□□□□□ -2.18
PRPF39-207ENST00000554439 A0A087WTM6 91 aa1.45□□□□□ -2.18
PRPF39-207ENST00000554439 RTL8CO15255 209 aa1.45□□□□□ -2.18
PRPF39-207ENST00000554439 LRP1BQ9NZR2 4599 aa1.45□□□□□ -2.18
PRPF39-207ENST00000554439 MIR22HGQ0VDD5 57 aa1.44□□□□□ -2.18
PRPF39-207ENST00000554439 SPATA8Q6RVD6 105 aa1.44□□□□□ -2.18
PRPF39-207ENST00000554439 IGLV7-43P04211 117 aa1.44□□□□□ -2.18
PRPF39-207ENST00000554439 LINC01554Q52M75 96 aa1.44□□□□□ -2.18
PRPF39-207ENST00000554439 CSAG1Q6PB30 78 aa1.44□□□□□ -2.18
PRPF39-207ENST00000554439 SPINK1P00995 79 aa1.44□□□□□ -2.18
PRPF39-207ENST00000554439 UQCR11O14957 56 aa1.43□□□□□ -2.18
PRPF39-207ENST00000554439 KRTAP13-2Q52LG2 175 aa1.43□□□□□ -2.18
PRPF39-207ENST00000554439 FLG2Q5D862 2391 aaPredicted RBP1.43□□□□□ -2.18
PRPF39-207ENST00000554439 PKD1P98161 4303 aa1.42□□□□□ -2.18
PRPF39-207ENST00000554439 PKHD1P08F94 4074 aa1.42□□□□□ -2.18
PRPF39-207ENST00000554439 NUPR2A6NF83 97 aa1.42□□□□□ -2.18
PRPF39-207ENST00000554439 HYDINQ4G0P3 5121 aa1.42□□□□□ -2.18
PRPF39-207ENST00000554439 KRTAP10-5P60370 271 aa1.41□□□□□ -2.18
PRPF39-207ENST00000554439 SSBP3-AS1Q7Z2R9 100 aa1.41□□□□□ -2.18
PRPF39-207ENST00000554439 H0YAA0 97 aa1.4□□□□□ -2.19
PRPF39-207ENST00000554439 Q6ZSA8 131 aa1.4□□□□□ -2.19
PRPF39-207ENST00000554439 C1orf134Q5TEV5 83 aa1.4□□□□□ -2.19
PRPF39-207ENST00000554439 LY6G6CO95867 125 aa1.39□□□□□ -2.19
PRPF39-207ENST00000554439 KRTAP1-4P0C5Y4 121 aa1.39□□□□□ -2.19
PRPF39-207ENST00000554439 CRIPTQ9P021 101 aa1.39□□□□□ -2.19
PRPF39-207ENST00000554439 A8MUU9 505 aa1.38□□□□□ -2.19
PRPF39-207ENST00000554439 MT3P25713 68 aa1.38□□□□□ -2.19
PRPF39-207ENST00000554439 KRTAP10-1P60331 282 aa1.38□□□□□ -2.19
PRPF39-207ENST00000554439 LINC00304Q8N9R0 145 aa1.38□□□□□ -2.19
PRPF39-207ENST00000554439 DNHD1Q96M86 4753 aa1.38□□□□□ -2.19
PRPF39-207ENST00000554439 LCE1FQ5T754 118 aa1.38□□□□□ -2.19
PRPF39-207ENST00000554439 C9orf92A6NGG3 77 aa1.38□□□□□ -2.19
PRPF39-207ENST00000554439 CAMK2N1Q7Z7J9 78 aa1.38□□□□□ -2.19
PRPF39-207ENST00000554439 DMBT1Q9UGM3 2413 aaPredicted RBP1.37□□□□□ -2.19
PRPF39-207ENST00000554439 AHNAK2Q8IVF2 5795 aa1.37□□□□□ -2.19
PRPF39-207ENST00000554439 KRTAP25-1Q3LHN0 102 aa1.37□□□□□ -2.19
PRPF39-207ENST00000554439 FAT1Q14517 4588 aa1.37□□□□□ -2.19
PRPF39-207ENST00000554439 A0A1B0GU33 70 aa1.37□□□□□ -2.19
PRPF39-207ENST00000554439 PKHD1L1Q86WI1 4243 aa1.36□□□□□ -2.19
PRPF39-207ENST00000554439 ROMO1P60602 79 aa1.36□□□□□ -2.19
PRPF39-207ENST00000554439 SACSQ9NZJ4 4579 aa1.36□□□□□ -2.19
PRPF39-207ENST00000554439 H1FX-AS1Q4G0G2 97 aa1.35□□□□□ -2.19
PRPF39-207ENST00000554439 HSPG2P98160 4391 aa1.35□□□□□ -2.19
PRPF39-207ENST00000554439 SMR3BP02814 79 aaPredicted RBP1.34□□□□□ -2.19
PRPF39-207ENST00000554439 P0C880 135 aa1.34□□□□□ -2.19
PRPF39-207ENST00000554439 COX6B2Q6YFQ2 88 aa1.34□□□□□ -2.19
PRPF39-207ENST00000554439 DYNC1H1Q14204 4646 aaKnown RBP1.34□□□□□ -2.2
PRPF39-207ENST00000554439 MYCBP2O75592 4640 aa1.34□□□□□ -2.2
PRPF39-207ENST00000554439 A0A0D9SG42 100 aa1.33□□□□□ -2.2
PRPF39-207ENST00000554439 KRTAP13-4Q3LI77 160 aa1.33□□□□□ -2.2
PRPF39-207ENST00000554439 C20orf166-AS1Q96NR2 134 aa1.33□□□□□ -2.2
PRPF39-207ENST00000554439 APOBP04114 4563 aaKnown RBP1.33□□□□□ -2.2
PRPF39-207ENST00000554439 LRP1Q07954 4544 aaKnown RBP1.33□□□□□ -2.2
PRPF39-207ENST00000554439 LPAP08519 4548 aa1.32□□□□□ -2.2
PRPF39-207ENST00000554439 OBSCNQ5VST9 7968 aa1.32□□□□□ -2.2
PRPF39-207ENST00000554439 TPRXLQ17RH7 258 aa1.32□□□□□ -2.2
PRPF39-207ENST00000554439 C10orf95Q9H7T3 257 aa1.32□□□□□ -2.2
PRPF39-207ENST00000554439 TNXBP22105 4242 aa1.31□□□□□ -2.2
PRPF39-207ENST00000554439 K7ERS5 55 aa1.31□□□□□ -2.2
PRPF39-207ENST00000554439 KRTAP10-12P60413 245 aa1.31□□□□□ -2.2
PRPF39-207ENST00000554439 RPS29P62273 56 aaKnown RBP1.3□□□□□ -2.2
PRPF39-207ENST00000554439 FAT3Q8TDW7 4589 aa1.3□□□□□ -2.2
PRPF39-207ENST00000554439 KRTAP10-8P60410 259 aa1.3□□□□□ -2.2
PRPF39-207ENST00000554439 RPL37P61927 97 aaKnown RBP1.3□□□□□ -2.2
PRPF39-207ENST00000554439 SPINT4Q6UDR6 99 aa1.3□□□□□ -2.2
PRPF39-207ENST00000554439 KRTAP10-4P60372 401 aaPredicted RBP1.29□□□□□ -2.2
PRPF39-207ENST00000554439 KRTAP12-2P59991 146 aa1.29□□□□□ -2.2
PRPF39-207ENST00000554439 KRTAP5-5Q701N2 237 aaPredicted RBP1.29□□□□□ -2.2
PRPF39-207ENST00000554439 CRCT1Q9UGL9 99 aa1.29□□□□□ -2.2
PRPF39-207ENST00000554439 S4R3F8 94 aa1.28□□□□□ -2.2
PRPF39-207ENST00000554439 KMT2CQ8NEZ4 4911 aaKnown RBP1.27□□□□□ -2.21
PRPF39-207ENST00000554439 LUZP6Q538Z0 58 aa1.27□□□□□ -2.21
PRPF39-207ENST00000554439 LRP2P98164 4655 aa1.26□□□□□ -2.21
PRPF39-207ENST00000554439 KRTAP12-1P59990 96 aa1.26□□□□□ -2.21
PRPF39-207ENST00000554439 LCE3CQ5T5A8 94 aa1.26□□□□□ -2.21
PRPF39-207ENST00000554439 A0A1B0GVY2 172 aa1.25□□□□□ -2.21
PRPF39-207ENST00000554439 RYR2Q92736 4967 aa1.23□□□□□ -2.21
PRPF39-207ENST00000554439 RYR1P21817 5038 aa1.23□□□□□ -2.21
PRPF39-207ENST00000554439 NEBP20929 6669 aa1.22□□□□□ -2.21
PRPF39-207ENST00000554439 ABCA13Q86UQ4 5058 aa1.21□□□□□ -2.22
PRPF39-207ENST00000554439 Q5VSD8 79 aa1.21□□□□□ -2.22
PRPF39-207ENST00000554439 M0QZ58 72 aa1.2□□□□□ -2.22
PRPF39-207ENST00000554439 RYR3Q15413 4870 aa1.2□□□□□ -2.22
PRPF39-207ENST00000554439 KIAA1109Q2LD37 5005 aa1.19□□□□□ -2.22
PRPF39-207ENST00000554439 MT1HL1P0DM35 61 aa1.19□□□□□ -2.22
PRPF39-207ENST00000554439 LCE3AQ5TA76 89 aa1.19□□□□□ -2.22
PRPF39-207ENST00000554439 R4GN34 69 aa1.19□□□□□ -2.22
PRPF39-207ENST00000554439 MUC17Q685J3 4493 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms