RNA–Protein interactions for RNA: ENST00000553865.1

CCNK-203, Transcript of cyclin K, humanhuman

TSL 1 (best)

Gene CCNK, Length 5,627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-203ENST00000553865 COL7A1Q02388 2944 aa4.26□□□□□ -1.73
CCNK-203ENST00000553865 DNAH17Q9UFH2 4485 aa4.23□□□□□ -1.73
CCNK-203ENST00000553865 CSMD3Q7Z407 3707 aa4.22□□□□□ -1.73
CCNK-203ENST00000553865 MEGF8Q7Z7M0 2845 aa4.22□□□□□ -1.73
CCNK-203ENST00000553865 DYNC2H1Q8NCM8 4307 aaKnown RBP4.21□□□□□ -1.73
CCNK-203ENST00000553865 DNAH11Q96DT5 4516 aa4.2□□□□□ -1.74
CCNK-203ENST00000553865 KRTAP3-3Q9BYR6 98 aa4.19□□□□□ -1.74
CCNK-203ENST00000553865 PLECQ15149 4684 aaKnown RBP4.19□□□□□ -1.74
CCNK-203ENST00000553865 KRTAP3-2Q9BYR7 98 aa4.19□□□□□ -1.74
CCNK-203ENST00000553865 DNAH2Q9P225 4427 aa4.15□□□□□ -1.75
CCNK-203ENST00000553865 KRTAP4-5Q9BYR2 181 aa4.11□□□□□ -1.75
CCNK-203ENST00000553865 CMYA5Q8N3K9 4069 aa4.11□□□□□ -1.75
CCNK-203ENST00000553865 DNAH8Q96JB1 4490 aa4.09□□□□□ -1.75
CCNK-203ENST00000553865 CRCT1Q9UGL9 99 aa4.08□□□□□ -1.76
CCNK-203ENST00000553865 DNAH5Q8TE73 4624 aa4.08□□□□□ -1.76
CCNK-203ENST00000553865 DYNC1H1Q14204 4646 aaKnown RBP4.07□□□□□ -1.76
CCNK-203ENST00000553865 KRTAP10-12P60413 245 aa4.06□□□□□ -1.76
CCNK-203ENST00000553865 STARD9Q9P2P6 4700 aa4.05□□□□□ -1.76
CCNK-203ENST00000553865 FAT2Q9NYQ8 4349 aa4.02□□□□□ -1.77
CCNK-203ENST00000553865 DNHD1Q96M86 4753 aa4.02□□□□□ -1.77
CCNK-203ENST00000553865 KRTAP23-1A1A580 65 aa4□□□□□ -1.77
CCNK-203ENST00000553865 KRTAP12-3P60328 96 aa3.98□□□□□ -1.77
CCNK-203ENST00000553865 SACSQ9NZJ4 4579 aa3.98□□□□□ -1.77
CCNK-203ENST00000553865 PRKDCP78527 4128 aaKnown RBP3.98□□□□□ -1.77
CCNK-203ENST00000553865 DNAH7Q8WXX0 4024 aa3.97□□□□□ -1.77
CCNK-203ENST00000553865 LRP1BQ9NZR2 4599 aa3.96□□□□□ -1.77
CCNK-203ENST00000553865 KRTAP10-5P60370 271 aa3.9□□□□□ -1.78
CCNK-203ENST00000553865 LORP23490 312 aaPredicted RBP3.87□□□□□ -1.79
CCNK-203ENST00000553865 LCE3AQ5TA76 89 aa3.86□□□□□ -1.79
CCNK-203ENST00000553865 RYR2Q92736 4967 aa3.82□□□□□ -1.8
CCNK-203ENST00000553865 KMT2AQ03164 3969 aa3.81□□□□□ -1.8
CCNK-203ENST00000553865 LYSTQ99698 3801 aa3.8□□□□□ -1.8
CCNK-203ENST00000553865 APOBP04114 4563 aaKnown RBP3.8□□□□□ -1.8
CCNK-203ENST00000553865 HECTD4Q9Y4D8 3996 aa3.8□□□□□ -1.8
CCNK-203ENST00000553865 KRTAP17-1Q9BYP8 105 aa3.79□□□□□ -1.8
CCNK-203ENST00000553865 KRTAP4-1Q9BYQ7 146 aa3.79□□□□□ -1.8
CCNK-203ENST00000553865 RYR1P21817 5038 aa3.78□□□□□ -1.8
CCNK-203ENST00000553865 MT1HP80294 61 aa3.76□□□□□ -1.81
CCNK-203ENST00000553865 HSPG2P98160 4391 aa3.76□□□□□ -1.81
CCNK-203ENST00000553865 VPS13BQ7Z7G8 4022 aa3.75□□□□□ -1.81
CCNK-203ENST00000553865 FAT1Q14517 4588 aa3.75□□□□□ -1.81
CCNK-203ENST00000553865 SPRR2GQ9BYE4 73 aa3.73□□□□□ -1.81
CCNK-203ENST00000553865 PKHD1L1Q86WI1 4243 aa3.73□□□□□ -1.81
CCNK-203ENST00000553865 FRAS1Q86XX4 4008 aa3.73□□□□□ -1.81
CCNK-203ENST00000553865 KRTAP8-1Q8IUC2 63 aa3.7□□□□□ -1.82
CCNK-203ENST00000553865 HERC1Q15751 4861 aa3.69□□□□□ -1.82
CCNK-203ENST00000553865 RYR3Q15413 4870 aa3.67□□□□□ -1.82
CCNK-203ENST00000553865 BIRC6Q9NR09 4857 aa3.67□□□□□ -1.82
CCNK-203ENST00000553865 KIAA1109Q2LD37 5005 aa3.67□□□□□ -1.82
CCNK-203ENST00000553865 PKD1P98161 4303 aa3.66□□□□□ -1.82
CCNK-203ENST00000553865 MT2AP02795 61 aa3.66□□□□□ -1.82
CCNK-203ENST00000553865 FAT3Q8TDW7 4589 aa3.66□□□□□ -1.82
CCNK-203ENST00000553865 MYCBP2O75592 4640 aa3.62□□□□□ -1.83
CCNK-203ENST00000553865 PKHD1P08F94 4074 aa3.61□□□□□ -1.83
CCNK-203ENST00000553865 HYDINQ4G0P3 5121 aa3.6□□□□□ -1.83
CCNK-203ENST00000553865 KRTAP19-4Q3LI73 84 aa3.59□□□□□ -1.84
CCNK-203ENST00000553865 MT1FP04733 61 aa3.57□□□□□ -1.84
CCNK-203ENST00000553865 KRTAP19-8Q3LI54 63 aa3.57□□□□□ -1.84
CCNK-203ENST00000553865 MUC17Q685J3 4493 aa3.52□□□□□ -1.85
CCNK-203ENST00000553865 TNXBP22105 4242 aa3.5□□□□□ -1.85
CCNK-203ENST00000553865 LCE2CQ5TA81 110 aa3.48□□□□□ -1.85
CCNK-203ENST00000553865 KRTAP10-7P60409 375 aaPredicted RBP3.46□□□□□ -1.85
CCNK-203ENST00000553865 LRP1Q07954 4544 aaKnown RBP3.45□□□□□ -1.86
CCNK-203ENST00000553865 KRTAP19-1Q8IUB9 90 aa3.45□□□□□ -1.86
CCNK-203ENST00000553865 HERC2O95714 4834 aa3.45□□□□□ -1.86
CCNK-203ENST00000553865 KRTAP9-8Q9BYQ0 159 aa3.44□□□□□ -1.86
CCNK-203ENST00000553865 KRTAP19-2Q3LHN2 52 aa3.43□□□□□ -1.86
CCNK-203ENST00000553865 LCE3CQ5T5A8 94 aa3.43□□□□□ -1.86
CCNK-203ENST00000553865 KRTAP19-5Q3LI72 72 aa3.42□□□□□ -1.86
CCNK-203ENST00000553865 SPRR2FQ96RM1 72 aa3.4□□□□□ -1.87
CCNK-203ENST00000553865 KMT2CQ8NEZ4 4911 aaKnown RBP3.39□□□□□ -1.87
CCNK-203ENST00000553865 KRTAP9-3Q9BYQ3 159 aa3.37□□□□□ -1.87
CCNK-203ENST00000553865 MT1BP07438 61 aa3.35□□□□□ -1.87
CCNK-203ENST00000553865 MT1XP80297 61 aa3.31□□□□□ -1.88
CCNK-203ENST00000553865 LRP2P98164 4655 aa3.3□□□□□ -1.88
CCNK-203ENST00000553865 KRTAP9-6A0A140TA67 174 aa3.29□□□□□ -1.88
CCNK-203ENST00000553865 KRTAP12-4P60329 112 aa3.28□□□□□ -1.88
CCNK-203ENST00000553865 PCLOQ9Y6V0 5065 aa3.28□□□□□ -1.88
CCNK-203ENST00000553865 FLGP20930 4061 aaPredicted RBP3.26□□□□□ -1.89
CCNK-203ENST00000553865 SPRR5A0A1B0GTR4 108 aa3.25□□□□□ -1.89
CCNK-203ENST00000553865 KRTAP9-2Q9BYQ4 174 aa3.25□□□□□ -1.89
CCNK-203ENST00000553865 EPPK1P58107 5090 aaKnown RBP3.24□□□□□ -1.89
CCNK-203ENST00000553865 LCE3BQ5TA77 95 aa3.22□□□□□ -1.89
CCNK-203ENST00000553865 LCE2AQ5TA79 106 aaPredicted RBP3.21□□□□□ -1.9
CCNK-203ENST00000553865 ABCA13Q86UQ4 5058 aa3.21□□□□□ -1.9
CCNK-203ENST00000553865 LCE2DQ5TA82 110 aaPredicted RBP3.2□□□□□ -1.9
CCNK-203ENST00000553865 SPRR2EP22531 72 aa3.2□□□□□ -1.9
CCNK-203ENST00000553865 SPRR2BP35325 72 aa3.2□□□□□ -1.9
CCNK-203ENST00000553865 SPRR2AP35326 72 aa3.2□□□□□ -1.9
CCNK-203ENST00000553865 LPAP08519 4548 aa3.18□□□□□ -1.9
CCNK-203ENST00000553865 KRTAP19-6Q3LI70 58 aa3.16□□□□□ -1.9
CCNK-203ENST00000553865 LCE2BO14633 110 aa3.14□□□□□ -1.91
CCNK-203ENST00000553865 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
CCNK-203ENST00000553865 MT1GP13640 62 aa3.12□□□□□ -1.91
CCNK-203ENST00000553865 LCE3EQ5T5B0 92 aa3.11□□□□□ -1.91
CCNK-203ENST00000553865 SPRR2DP22532 72 aa3.11□□□□□ -1.91
CCNK-203ENST00000553865 KRTAP4-8A0A0G2JLE6 195 aa3.09□□□□□ -1.92
CCNK-203ENST00000553865 KRTAP4-8Q9BYQ9 185 aa3.09□□□□□ -1.92
CCNK-203ENST00000553865 HMCN2Q8NDA2 5059 aa3.07□□□□□ -1.92
CCNK-203ENST00000553865 UBR4Q5T4S7 5183 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms