RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 SERP1Q9Y6X1 66 aa5.3□□□□□ -1.56
TMEM116-216ENST00000552800 TPRXLQ17RH7 258 aa5.28□□□□□ -1.56
TMEM116-216ENST00000552800 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.28□□□□□ -1.56
TMEM116-216ENST00000552800 RETNLBQ9BQ08 111 aa5.27□□□□□ -1.57
TMEM116-216ENST00000552800 RPL37P61927 97 aaKnown RBP5.24□□□□□ -1.57
TMEM116-216ENST00000552800 C9orf92A6NGG3 77 aa5.23□□□□□ -1.57
TMEM116-216ENST00000552800 C7orf65Q6ZTY9 151 aa5.22□□□□□ -1.57
TMEM116-216ENST00000552800 ABCA13Q86UQ4 5058 aa5.22□□□□□ -1.57
TMEM116-216ENST00000552800 HRES1P13985 223 aa5.21□□□□□ -1.58
TMEM116-216ENST00000552800 DMAC1Q96GE9 116 aa5.2□□□□□ -1.58
TMEM116-216ENST00000552800 SMIM26A0A096LP01 95 aa5.19□□□□□ -1.58
TMEM116-216ENST00000552800 PCOTHQ58A44 107 aa5.19□□□□□ -1.58
TMEM116-216ENST00000552800 A8MUN3 132 aa5.18□□□□□ -1.58
TMEM116-216ENST00000552800 ATP11AUNQ6ZP68 121 aa5.17□□□□□ -1.58
TMEM116-216ENST00000552800 IGKV2D-30A0A075B6S6 120 aa5.16□□□□□ -1.58
TMEM116-216ENST00000552800 ACYP2P14621 99 aa5.16□□□□□ -1.58
TMEM116-216ENST00000552800 SPINK7P58062 85 aa5.16□□□□□ -1.58
TMEM116-216ENST00000552800 PRR4Q16378 134 aa5.14□□□□□ -1.59
TMEM116-216ENST00000552800 MPLKIPQ8TAP9 179 aa5.14□□□□□ -1.59
TMEM116-216ENST00000552800 Q1T7F1 81 aa5.11□□□□□ -1.59
TMEM116-216ENST00000552800 COA5Q86WW8 74 aa5.11□□□□□ -1.59
TMEM116-216ENST00000552800 LRP2P98164 4655 aa5.08□□□□□ -1.6
TMEM116-216ENST00000552800 COX6B2Q6YFQ2 88 aa5.08□□□□□ -1.6
TMEM116-216ENST00000552800 V9GYY9 64 aa5.08□□□□□ -1.6
TMEM116-216ENST00000552800 A0A0A0MQY5 61 aa5.07□□□□□ -1.6
TMEM116-216ENST00000552800 SEC61BP60468 96 aaKnown RBP5.04□□□□□ -1.6
TMEM116-216ENST00000552800 C4orf26Q17RF5 130 aa5.04□□□□□ -1.6
TMEM116-216ENST00000552800 LINC01558Q9Y6Z2 57 aa5.03□□□□□ -1.6
TMEM116-216ENST00000552800 MUC17Q685J3 4493 aa5.02□□□□□ -1.61
TMEM116-216ENST00000552800 LPAP08519 4548 aa5.02□□□□□ -1.61
TMEM116-216ENST00000552800 KRTAP5-11Q6L8G4 156 aa5.01□□□□□ -1.61
TMEM116-216ENST00000552800 PCLOQ9Y6V0 5065 aa5□□□□□ -1.61
TMEM116-216ENST00000552800 SPTSSBQ8NFR3 76 aa4.96□□□□□ -1.62
TMEM116-216ENST00000552800 CHKB-CPT1BH3BT56 60 aa4.95□□□□□ -1.62
TMEM116-216ENST00000552800 KRTAP10-7P60409 375 aaPredicted RBP4.93□□□□□ -1.62
TMEM116-216ENST00000552800 H1FX-AS1Q4G0G2 97 aa4.93□□□□□ -1.62
TMEM116-216ENST00000552800 KRTAP19-2Q3LHN2 52 aa4.92□□□□□ -1.62
TMEM116-216ENST00000552800 HMCN2Q8NDA2 5059 aa4.92□□□□□ -1.62
TMEM116-216ENST00000552800 RBM12B-AS1Q9P1G2 102 aa4.91□□□□□ -1.62
TMEM116-216ENST00000552800 HERC1Q15751 4861 aa4.9□□□□□ -1.62
TMEM116-216ENST00000552800 Q5VV11 94 aa4.9□□□□□ -1.63
TMEM116-216ENST00000552800 KRTAP4-1Q9BYQ7 146 aa4.9□□□□□ -1.63
TMEM116-216ENST00000552800 LCE1AQ5T7P2 110 aa4.87□□□□□ -1.63
TMEM116-216ENST00000552800 LCA10Q71F78 164 aa4.85□□□□□ -1.63
TMEM116-216ENST00000552800 PRR15LQ9BU68 103 aa4.85□□□□□ -1.63
TMEM116-216ENST00000552800 S4R3F8 94 aa4.84□□□□□ -1.63
TMEM116-216ENST00000552800 PSPHP1O15172 72 aa4.83□□□□□ -1.64
TMEM116-216ENST00000552800 A0A1B0GU69 56 aa4.82□□□□□ -1.64
TMEM116-216ENST00000552800 H0YAA0 97 aa4.82□□□□□ -1.64
TMEM116-216ENST00000552800 FLGP20930 4061 aaPredicted RBP4.8□□□□□ -1.64
TMEM116-216ENST00000552800 SEC61GP60059 68 aa4.78□□□□□ -1.64
TMEM116-216ENST00000552800 CSAG1Q6PB30 78 aa4.78□□□□□ -1.64
TMEM116-216ENST00000552800 KRTAP10-6P60371 365 aaPredicted RBP4.76□□□□□ -1.65
TMEM116-216ENST00000552800 SPATA8Q6RVD6 105 aa4.76□□□□□ -1.65
TMEM116-216ENST00000552800 UQCR11O14957 56 aa4.74□□□□□ -1.65
TMEM116-216ENST00000552800 CDC42SE1Q9NRR8 79 aa4.74□□□□□ -1.65
TMEM116-216ENST00000552800 PRO0628Q9UI54 55 aa4.73□□□□□ -1.65
TMEM116-216ENST00000552800 A0A1B0GU33 70 aa4.7□□□□□ -1.66
TMEM116-216ENST00000552800 A6NED7 52 aa4.7□□□□□ -1.66
TMEM116-216ENST00000552800 MUC2Q02817 5179 aa4.69□□□□□ -1.66
TMEM116-216ENST00000552800 BRK1Q8WUW1 75 aa4.67□□□□□ -1.66
TMEM116-216ENST00000552800 MIR22HGQ0VDD5 57 aa4.66□□□□□ -1.66
TMEM116-216ENST00000552800 M0QZ58 72 aa4.62□□□□□ -1.67
TMEM116-216ENST00000552800 P0C880 135 aa4.62□□□□□ -1.67
TMEM116-216ENST00000552800 RNF213Q63HN8 5207 aa4.61□□□□□ -1.67
TMEM116-216ENST00000552800 ADM2Q7Z4H4 148 aa4.61□□□□□ -1.67
TMEM116-216ENST00000552800 A8MU10 97 aa4.6□□□□□ -1.67
TMEM116-216ENST00000552800 UBR4Q5T4S7 5183 aa4.58□□□□□ -1.68
TMEM116-216ENST00000552800 MT1HP80294 61 aa4.56□□□□□ -1.68
TMEM116-216ENST00000552800 CRIPTQ9P021 101 aa4.56□□□□□ -1.68
TMEM116-216ENST00000552800 KRTAP13-4Q3LI77 160 aa4.55□□□□□ -1.68
TMEM116-216ENST00000552800 LCE1EQ5T753 118 aa4.53□□□□□ -1.68
TMEM116-216ENST00000552800 FAT4Q6V0I7 4981 aa4.52□□□□□ -1.69
TMEM116-216ENST00000552800 KRTAP5-1Q6L8H4 278 aa4.52□□□□□ -1.69
TMEM116-216ENST00000552800 A6NN06 94 aa4.51□□□□□ -1.69
TMEM116-216ENST00000552800 KRTAP2-2Q9BYT5 123 aa4.51□□□□□ -1.69
TMEM116-216ENST00000552800 KRTAP5-9P26371 169 aa4.48□□□□□ -1.69
TMEM116-216ENST00000552800 PMAIP1Q13794 54 aa4.47□□□□□ -1.69
TMEM116-216ENST00000552800 R4GN34 69 aa4.45□□□□□ -1.7
TMEM116-216ENST00000552800 KRTAP5-4Q6L8H1 288 aa4.44□□□□□ -1.7
TMEM116-216ENST00000552800 KRTAP12-1P59990 96 aa4.43□□□□□ -1.7
TMEM116-216ENST00000552800 SPRR2GQ9BYE4 73 aa4.43□□□□□ -1.7
TMEM116-216ENST00000552800 K7ERS5 55 aa4.42□□□□□ -1.7
TMEM116-216ENST00000552800 MT3P25713 68 aa4.41□□□□□ -1.7
TMEM116-216ENST00000552800 MT2AP02795 61 aa4.39□□□□□ -1.71
TMEM116-216ENST00000552800 M0R2T5 61 aa4.38□□□□□ -1.71
TMEM116-216ENST00000552800 KRTAP4-4Q9BYR3 166 aa4.38□□□□□ -1.71
TMEM116-216ENST00000552800 KRTAP12-2P59991 146 aa4.37□□□□□ -1.71
TMEM116-216ENST00000552800 MT1FP04733 61 aa4.35□□□□□ -1.71
TMEM116-216ENST00000552800 A0A0D9SG42 100 aa4.34□□□□□ -1.71
TMEM116-216ENST00000552800 KTN1-AS1Q86SY8 53 aa4.34□□□□□ -1.71
TMEM116-216ENST00000552800 KRTAP19-8Q3LI54 63 aa4.32□□□□□ -1.72
TMEM116-216ENST00000552800 KRTAP10-10P60014 251 aa4.29□□□□□ -1.72
TMEM116-216ENST00000552800 ROMO1P60602 79 aa4.28□□□□□ -1.72
TMEM116-216ENST00000552800 SPINT4Q6UDR6 99 aa4.27□□□□□ -1.73
TMEM116-216ENST00000552800 LINC01554Q52M75 96 aa4.24□□□□□ -1.73
TMEM116-216ENST00000552800 PRAC1Q96KF2 57 aa4.2□□□□□ -1.74
TMEM116-216ENST00000552800 MT1BP07438 61 aa4.19□□□□□ -1.74
TMEM116-216ENST00000552800 PLAC4Q8WY50 150 aa4.18□□□□□ -1.74
TMEM116-216ENST00000552800 C10orf95Q9H7T3 257 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms