RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 HECTD1Q9ULT8 2610 aa2.69□□□□□ -1.98
LSM3P2-201ENST00000551246 FBN1P35555 2871 aaKnown RBP2.68□□□□□ -1.98
LSM3P2-201ENST00000551246 CENPEQ02224 2701 aa2.68□□□□□ -1.98
LSM3P2-201ENST00000551246 SMR3AQ99954 134 aa2.68□□□□□ -1.98
LSM3P2-201ENST00000551246 PDZD2O15018 2839 aa2.68□□□□□ -1.98
LSM3P2-201ENST00000551246 HECTD4Q9Y4D8 3996 aa2.67□□□□□ -1.98
LSM3P2-201ENST00000551246 ACANP16112 2415 aa2.67□□□□□ -1.98
LSM3P2-201ENST00000551246 PLECQ15149 4684 aaKnown RBP2.67□□□□□ -1.98
LSM3P2-201ENST00000551246 FAM208BQ5VWN6 2430 aa2.67□□□□□ -1.98
LSM3P2-201ENST00000551246 TEP1Q99973 2627 aaKnown RBP2.66□□□□□ -1.98
LSM3P2-201ENST00000551246 KRTAP12-1P59990 96 aa2.66□□□□□ -1.98
LSM3P2-201ENST00000551246 KRTAP12-2P59991 146 aa2.66□□□□□ -1.98
LSM3P2-201ENST00000551246 KRTAP10-5P60370 271 aa2.65□□□□□ -1.99
LSM3P2-201ENST00000551246 IGSF10Q6WRI0 2623 aa2.65□□□□□ -1.99
LSM3P2-201ENST00000551246 UBE2DNLQ8IWF7 75 aa2.64□□□□□ -1.99
LSM3P2-201ENST00000551246 MYO18BQ8IUG5 2567 aa2.64□□□□□ -1.99
LSM3P2-201ENST00000551246 MEGF8Q7Z7M0 2845 aa2.64□□□□□ -1.99
LSM3P2-201ENST00000551246 PKHD1L1Q86WI1 4243 aa2.63□□□□□ -1.99
LSM3P2-201ENST00000551246 CACNA1AO00555 2505 aa2.63□□□□□ -1.99
LSM3P2-201ENST00000551246 DNAH5Q8TE73 4624 aa2.63□□□□□ -1.99
LSM3P2-201ENST00000551246 TENM1Q9UKZ4 2725 aa2.63□□□□□ -1.99
LSM3P2-201ENST00000551246 LRP1BQ9NZR2 4599 aa2.62□□□□□ -1.99
LSM3P2-201ENST00000551246 MYCBP2O75592 4640 aa2.62□□□□□ -1.99
LSM3P2-201ENST00000551246 PLAC4Q8WY50 150 aa2.61□□□□□ -1.99
LSM3P2-201ENST00000551246 CSMD3Q7Z407 3707 aa2.61□□□□□ -1.99
LSM3P2-201ENST00000551246 FASNP49327 2511 aaKnown RBP2.6□□□□□ -1.99
LSM3P2-201ENST00000551246 A0A0D9SG42 100 aa2.6□□□□□ -1.99
LSM3P2-201ENST00000551246 LCE3CQ5T5A8 94 aa2.6□□□□□ -1.99
LSM3P2-201ENST00000551246 TGP01266 2768 aa2.59□□□□□ -2
LSM3P2-201ENST00000551246 NOTCH1P46531 2555 aa2.58□□□□□ -2
LSM3P2-201ENST00000551246 STAB2Q8WWQ8 2551 aa2.58□□□□□ -2
LSM3P2-201ENST00000551246 MAST4O15021 2626 aa2.58□□□□□ -2
LSM3P2-201ENST00000551246 FLNBO75369 2602 aaKnown RBP2.58□□□□□ -2
LSM3P2-201ENST00000551246 NBEAL1Q6ZS30 2694 aa2.58□□□□□ -2
LSM3P2-201ENST00000551246 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.57□□□□□ -2
LSM3P2-201ENST00000551246 APOBP04114 4563 aaKnown RBP2.56□□□□□ -2
LSM3P2-201ENST00000551246 SPRR5A0A1B0GTR4 108 aa2.56□□□□□ -2
LSM3P2-201ENST00000551246 A0A1B0GVY2 172 aa2.56□□□□□ -2
LSM3P2-201ENST00000551246 M0QZ58 72 aa2.56□□□□□ -2
LSM3P2-201ENST00000551246 ATRQ13535 2644 aa2.56□□□□□ -2
LSM3P2-201ENST00000551246 ITPR2Q14571 2701 aa2.56□□□□□ -2
LSM3P2-201ENST00000551246 LRP1Q07954 4544 aaKnown RBP2.55□□□□□ -2
LSM3P2-201ENST00000551246 COL7A1Q02388 2944 aa2.55□□□□□ -2
LSM3P2-201ENST00000551246 NSD1Q96L73 2696 aaPredicted RBP2.53□□□□□ -2
LSM3P2-201ENST00000551246 DYNC1H1Q14204 4646 aaKnown RBP2.53□□□□□ -2
LSM3P2-201ENST00000551246 FBN3Q75N90 2809 aa2.52□□□□□ -2.01
LSM3P2-201ENST00000551246 CAMK2N1Q7Z7J9 78 aa2.52□□□□□ -2.01
LSM3P2-201ENST00000551246 PRO2289Q9P1D8 64 aa2.52□□□□□ -2.01
LSM3P2-201ENST00000551246 PP632Q6XCG6 107 aa2.5□□□□□ -2.01
LSM3P2-201ENST00000551246 USP24Q9UPU5 2620 aa2.5□□□□□ -2.01
LSM3P2-201ENST00000551246 FAT2Q9NYQ8 4349 aa2.49□□□□□ -2.01
LSM3P2-201ENST00000551246 KRTAP10-1P60331 282 aa2.49□□□□□ -2.01
LSM3P2-201ENST00000551246 KRTAP10-8P60410 259 aa2.49□□□□□ -2.01
LSM3P2-201ENST00000551246 STARD9Q9P2P6 4700 aa2.49□□□□□ -2.01
LSM3P2-201ENST00000551246 COL6A5A8TX70 2615 aa2.48□□□□□ -2.01
LSM3P2-201ENST00000551246 HSPG2P98160 4391 aa2.48□□□□□ -2.01
LSM3P2-201ENST00000551246 C9orf92A6NGG3 77 aa2.48□□□□□ -2.01
LSM3P2-201ENST00000551246 TNXBP22105 4242 aa2.47□□□□□ -2.01
LSM3P2-201ENST00000551246 FAT3Q8TDW7 4589 aa2.47□□□□□ -2.01
LSM3P2-201ENST00000551246 KMT2AQ03164 3969 aa2.46□□□□□ -2.02
LSM3P2-201ENST00000551246 DMBT1Q9UGM3 2413 aaPredicted RBP2.46□□□□□ -2.02
LSM3P2-201ENST00000551246 KRTAP9-6A8MVA2 160 aa2.46□□□□□ -2.02
LSM3P2-201ENST00000551246 PKHD1P08F94 4074 aa2.46□□□□□ -2.02
LSM3P2-201ENST00000551246 VPS13BQ7Z7G8 4022 aa2.45□□□□□ -2.02
LSM3P2-201ENST00000551246 PKD1P98161 4303 aa2.45□□□□□ -2.02
LSM3P2-201ENST00000551246 FAT1Q14517 4588 aa2.45□□□□□ -2.02
LSM3P2-201ENST00000551246 J3QKU1 62 aa2.43□□□□□ -2.02
LSM3P2-201ENST00000551246 INE1O15225 51 aa2.42□□□□□ -2.02
LSM3P2-201ENST00000551246 KRTAP10-4P60372 401 aaPredicted RBP2.42□□□□□ -2.02
LSM3P2-201ENST00000551246 STAB1Q9NY15 2570 aa2.42□□□□□ -2.02
LSM3P2-201ENST00000551246 MGAM2Q2M2H8 2515 aa2.4□□□□□ -2.02
LSM3P2-201ENST00000551246 LCE3EQ5T5B0 92 aa2.38□□□□□ -2.03
LSM3P2-201ENST00000551246 HERC1Q15751 4861 aa2.31□□□□□ -2.04
LSM3P2-201ENST00000551246 Q5VSD8 79 aa2.3□□□□□ -2.04
LSM3P2-201ENST00000551246 R4GN34 69 aa2.29□□□□□ -2.04
LSM3P2-201ENST00000551246 DNHD1Q96M86 4753 aa2.28□□□□□ -2.04
LSM3P2-201ENST00000551246 HYDINQ4G0P3 5121 aa2.24□□□□□ -2.05
LSM3P2-201ENST00000551246 KRTAP5-1Q6L8H4 278 aa2.24□□□□□ -2.05
LSM3P2-201ENST00000551246 FLGP20930 4061 aaPredicted RBP2.24□□□□□ -2.05
LSM3P2-201ENST00000551246 TNP1P09430 55 aa2.22□□□□□ -2.05
LSM3P2-201ENST00000551246 KRTAP19-2Q3LHN2 52 aa2.2□□□□□ -2.06
LSM3P2-201ENST00000551246 SMR3BP02814 79 aaPredicted RBP2.19□□□□□ -2.06
LSM3P2-201ENST00000551246 KRTAP8-1Q8IUC2 63 aa2.15□□□□□ -2.07
LSM3P2-201ENST00000551246 MUC17Q685J3 4493 aa2.15□□□□□ -2.07
LSM3P2-201ENST00000551246 MT1HL1P0DM35 61 aa2.14□□□□□ -2.07
LSM3P2-201ENST00000551246 KRTAP10-10P60014 251 aa2.14□□□□□ -2.07
LSM3P2-201ENST00000551246 RYR2Q92736 4967 aa2.13□□□□□ -2.07
LSM3P2-201ENST00000551246 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
LSM3P2-201ENST00000551246 LPAP08519 4548 aa2.12□□□□□ -2.07
LSM3P2-201ENST00000551246 KRTAP5-4Q6L8H1 288 aa2.12□□□□□ -2.07
LSM3P2-201ENST00000551246 LRP2P98164 4655 aa2.11□□□□□ -2.07
LSM3P2-201ENST00000551246 KMT2CQ8NEZ4 4911 aaKnown RBP2.1□□□□□ -2.07
LSM3P2-201ENST00000551246 RYR1P21817 5038 aa2.09□□□□□ -2.07
LSM3P2-201ENST00000551246 LCE3AQ5TA76 89 aa2.09□□□□□ -2.07
LSM3P2-201ENST00000551246 KRTAP4-1Q9BYQ7 146 aa2.07□□□□□ -2.08
LSM3P2-201ENST00000551246 SPRR2GQ9BYE4 73 aa2.04□□□□□ -2.08
LSM3P2-201ENST00000551246 OBSCNQ5VST9 7968 aa2.03□□□□□ -2.08
LSM3P2-201ENST00000551246 KRTAP2-3P0C7H8 128 aa2.01□□□□□ -2.09
LSM3P2-201ENST00000551246 KRTAP5-9P26371 169 aa2.01□□□□□ -2.09
LSM3P2-201ENST00000551246 KRTAP2-4Q9BYR9 128 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms