RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 DYNC2H1Q8NCM8 4307 aaKnown RBP4.95□□□□□ -1.62
SMARCC2-209ENST00000550164 DNAH8Q96JB1 4490 aa4.94□□□□□ -1.62
SMARCC2-209ENST00000550164 STARD9Q9P2P6 4700 aa4.93□□□□□ -1.62
SMARCC2-209ENST00000550164 VPS13DQ5THJ4 4388 aa4.91□□□□□ -1.62
SMARCC2-209ENST00000550164 KRTAP10-4P60372 401 aaPredicted RBP4.91□□□□□ -1.62
SMARCC2-209ENST00000550164 LYSTQ99698 3801 aa4.91□□□□□ -1.62
SMARCC2-209ENST00000550164 DNAH17Q9UFH2 4485 aa4.9□□□□□ -1.63
SMARCC2-209ENST00000550164 DNAH5Q8TE73 4624 aa4.88□□□□□ -1.63
SMARCC2-209ENST00000550164 LRP1BQ9NZR2 4599 aa4.87□□□□□ -1.63
SMARCC2-209ENST00000550164 KMT2AQ03164 3969 aa4.85□□□□□ -1.63
SMARCC2-209ENST00000550164 KRTAP15-1Q3LI76 137 aa4.85□□□□□ -1.63
SMARCC2-209ENST00000550164 ALMS1Q8TCU4 4167 aa4.84□□□□□ -1.63
SMARCC2-209ENST00000550164 DNAH7Q8WXX0 4024 aa4.84□□□□□ -1.63
SMARCC2-209ENST00000550164 FRAS1Q86XX4 4008 aa4.83□□□□□ -1.64
SMARCC2-209ENST00000550164 DNAH2Q9P225 4427 aa4.83□□□□□ -1.64
SMARCC2-209ENST00000550164 DNAH6Q9C0G6 4158 aa4.81□□□□□ -1.64
SMARCC2-209ENST00000550164 FAT1Q14517 4588 aa4.81□□□□□ -1.64
SMARCC2-209ENST00000550164 MT1HL1P0DM35 61 aa4.79□□□□□ -1.64
SMARCC2-209ENST00000550164 VPS13BQ7Z7G8 4022 aa4.71□□□□□ -1.66
SMARCC2-209ENST00000550164 KMT2CQ8NEZ4 4911 aaKnown RBP4.71□□□□□ -1.66
SMARCC2-209ENST00000550164 HECTD4Q9Y4D8 3996 aa4.7□□□□□ -1.66
SMARCC2-209ENST00000550164 DYNC1H1Q14204 4646 aaKnown RBP4.7□□□□□ -1.66
SMARCC2-209ENST00000550164 RYR3Q15413 4870 aa4.69□□□□□ -1.66
SMARCC2-209ENST00000550164 KRTAP10-10P60014 251 aa4.67□□□□□ -1.66
SMARCC2-209ENST00000550164 MYCBP2O75592 4640 aa4.66□□□□□ -1.66
SMARCC2-209ENST00000550164 LORP23490 312 aaPredicted RBP4.65□□□□□ -1.67
SMARCC2-209ENST00000550164 SACSQ9NZJ4 4579 aa4.65□□□□□ -1.67
SMARCC2-209ENST00000550164 RYR2Q92736 4967 aa4.62□□□□□ -1.67
SMARCC2-209ENST00000550164 KRTAP4-5Q9BYR2 181 aa4.58□□□□□ -1.68
SMARCC2-209ENST00000550164 HYDINQ4G0P3 5121 aa4.57□□□□□ -1.68
SMARCC2-209ENST00000550164 APOBP04114 4563 aaKnown RBP4.53□□□□□ -1.68
SMARCC2-209ENST00000550164 FAT2Q9NYQ8 4349 aa4.53□□□□□ -1.68
SMARCC2-209ENST00000550164 LRP1Q07954 4544 aaKnown RBP4.52□□□□□ -1.69
SMARCC2-209ENST00000550164 RYR1P21817 5038 aa4.48□□□□□ -1.69
SMARCC2-209ENST00000550164 PKD1P98161 4303 aa4.48□□□□□ -1.69
SMARCC2-209ENST00000550164 EPPK1P58107 5090 aaKnown RBP4.48□□□□□ -1.69
SMARCC2-209ENST00000550164 FAT3Q8TDW7 4589 aa4.47□□□□□ -1.69
SMARCC2-209ENST00000550164 PKHD1P08F94 4074 aa4.46□□□□□ -1.7
SMARCC2-209ENST00000550164 KIAA1109Q2LD37 5005 aa4.44□□□□□ -1.7
SMARCC2-209ENST00000550164 KRTAP4-1Q9BYQ7 146 aa4.43□□□□□ -1.7
SMARCC2-209ENST00000550164 BIRC6Q9NR09 4857 aa4.42□□□□□ -1.7
SMARCC2-209ENST00000550164 PRO2289Q9P1D8 64 aa4.41□□□□□ -1.7
SMARCC2-209ENST00000550164 LRP2P98164 4655 aa4.35□□□□□ -1.71
SMARCC2-209ENST00000550164 KRTAP17-1Q9BYP8 105 aa4.34□□□□□ -1.71
SMARCC2-209ENST00000550164 HERC2O95714 4834 aa4.33□□□□□ -1.72
SMARCC2-209ENST00000550164 LCE3AQ5TA76 89 aa4.32□□□□□ -1.72
SMARCC2-209ENST00000550164 LCE2DQ5TA82 110 aaPredicted RBP4.32□□□□□ -1.72
SMARCC2-209ENST00000550164 PKHD1L1Q86WI1 4243 aa4.31□□□□□ -1.72
SMARCC2-209ENST00000550164 KRTAP23-1A1A580 65 aa4.31□□□□□ -1.72
SMARCC2-209ENST00000550164 KRTAP10-12P60413 245 aa4.26□□□□□ -1.73
SMARCC2-209ENST00000550164 HSPG2P98160 4391 aa4.25□□□□□ -1.73
SMARCC2-209ENST00000550164 KRTAP12-3P60328 96 aa4.23□□□□□ -1.73
SMARCC2-209ENST00000550164 PCLOQ9Y6V0 5065 aa4.21□□□□□ -1.74
SMARCC2-209ENST00000550164 INE1O15225 51 aa4.21□□□□□ -1.74
SMARCC2-209ENST00000550164 ABCA13Q86UQ4 5058 aa4.14□□□□□ -1.75
SMARCC2-209ENST00000550164 LPAP08519 4548 aa4.14□□□□□ -1.75
SMARCC2-209ENST00000550164 SPRR2GQ9BYE4 73 aa4.12□□□□□ -1.75
SMARCC2-209ENST00000550164 TNXBP22105 4242 aa4.11□□□□□ -1.75
SMARCC2-209ENST00000550164 MT2AP02795 61 aa4.06□□□□□ -1.76
SMARCC2-209ENST00000550164 MT1HP80294 61 aa4.06□□□□□ -1.76
SMARCC2-209ENST00000550164 MT1FP04733 61 aa4.04□□□□□ -1.76
SMARCC2-209ENST00000550164 KRTAP19-1Q8IUB9 90 aa4.02□□□□□ -1.77
SMARCC2-209ENST00000550164 KRTAP8-1Q8IUC2 63 aa3.99□□□□□ -1.77
SMARCC2-209ENST00000550164 HERC1Q15751 4861 aa3.95□□□□□ -1.78
SMARCC2-209ENST00000550164 SPRR5A0A1B0GTR4 108 aa3.95□□□□□ -1.78
SMARCC2-209ENST00000550164 CRCT1Q9UGL9 99 aa3.92□□□□□ -1.78
SMARCC2-209ENST00000550164 KRTAP19-2Q3LHN2 52 aa3.92□□□□□ -1.78
SMARCC2-209ENST00000550164 MUC17Q685J3 4493 aa3.87□□□□□ -1.79
SMARCC2-209ENST00000550164 KRTAP10-7P60409 375 aaPredicted RBP3.86□□□□□ -1.79
SMARCC2-209ENST00000550164 KRTAP19-5Q3LI72 72 aa3.86□□□□□ -1.79
SMARCC2-209ENST00000550164 HMCN2Q8NDA2 5059 aa3.86□□□□□ -1.79
SMARCC2-209ENST00000550164 LCE2BO14633 110 aa3.86□□□□□ -1.79
SMARCC2-209ENST00000550164 LCE2CQ5TA81 110 aa3.85□□□□□ -1.79
SMARCC2-209ENST00000550164 KRTAP19-8Q3LI54 63 aa3.85□□□□□ -1.79
SMARCC2-209ENST00000550164 MT1XP80297 61 aa3.84□□□□□ -1.8
SMARCC2-209ENST00000550164 KRTAP10-5P60370 271 aa3.82□□□□□ -1.8
SMARCC2-209ENST00000550164 LCE3CQ5T5A8 94 aa3.81□□□□□ -1.8
SMARCC2-209ENST00000550164 FLGP20930 4061 aaPredicted RBP3.81□□□□□ -1.8
SMARCC2-209ENST00000550164 MT1BP07438 61 aa3.8□□□□□ -1.8
SMARCC2-209ENST00000550164 MUC2Q02817 5179 aa3.8□□□□□ -1.8
SMARCC2-209ENST00000550164 KRTAP9-8Q9BYQ0 159 aa3.8□□□□□ -1.8
SMARCC2-209ENST00000550164 LCE2AQ5TA79 106 aaPredicted RBP3.7□□□□□ -1.82
SMARCC2-209ENST00000550164 FAT4Q6V0I7 4981 aa3.69□□□□□ -1.82
SMARCC2-209ENST00000550164 UBR4Q5T4S7 5183 aa3.67□□□□□ -1.82
SMARCC2-209ENST00000550164 KRTAP4-8A0A0G2JLE6 195 aa3.66□□□□□ -1.82
SMARCC2-209ENST00000550164 KRTAP4-8Q9BYQ9 185 aa3.66□□□□□ -1.82
SMARCC2-209ENST00000550164 KRTAP9-3Q9BYQ3 159 aa3.65□□□□□ -1.83
SMARCC2-209ENST00000550164 RNF213Q63HN8 5207 aa3.63□□□□□ -1.83
SMARCC2-209ENST00000550164 KRTAP4-7Q9BYR0 210 aa3.55□□□□□ -1.84
SMARCC2-209ENST00000550164 KRTAP19-4Q3LI73 84 aa3.48□□□□□ -1.85
SMARCC2-209ENST00000550164 FSIP2Q5CZC0 6907 aa3.46□□□□□ -1.86
SMARCC2-209ENST00000550164 MT1GP13640 62 aa3.46□□□□□ -1.86
SMARCC2-209ENST00000550164 SPRR2FQ96RM1 72 aa3.44□□□□□ -1.86
SMARCC2-209ENST00000550164 KRTAP12-4P60329 112 aa3.44□□□□□ -1.86
SMARCC2-209ENST00000550164 MT1LQ93083 61 aa3.4□□□□□ -1.86
SMARCC2-209ENST00000550164 LCE3BQ5TA77 95 aa3.38□□□□□ -1.87
SMARCC2-209ENST00000550164 SYNE1Q8NF91 8797 aaKnown RBP3.38□□□□□ -1.87
SMARCC2-209ENST00000550164 MT1EP04732 61 aa3.37□□□□□ -1.87
SMARCC2-209ENST00000550164 KRTAP19-7Q3SYF9 63 aa3.33□□□□□ -1.88
SMARCC2-209ENST00000550164 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms