RNA–Protein interactions for RNA: ENST00000546711.5

FGD6-203, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

TSL 5 BASIC

Gene FGD6, Length 4,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-203ENST00000546711 KRTAP12-1P59990 96 aa7□□□□□ -1.29
FGD6-203ENST00000546711 KRTAP3-3Q9BYR6 98 aa6.99□□□□□ -1.29
FGD6-203ENST00000546711 DNAH5Q8TE73 4624 aa6.99□□□□□ -1.29
FGD6-203ENST00000546711 ALMS1Q8TCU4 4167 aa6.99□□□□□ -1.29
FGD6-203ENST00000546711 DNAH7Q8WXX0 4024 aa6.99□□□□□ -1.29
FGD6-203ENST00000546711 A0A0A0MQY5 61 aa6.98□□□□□ -1.29
FGD6-203ENST00000546711 LRP1BQ9NZR2 4599 aa6.97□□□□□ -1.29
FGD6-203ENST00000546711 PRKDCP78527 4128 aaKnown RBP6.97□□□□□ -1.29
FGD6-203ENST00000546711 KRTAP3-2Q9BYR7 98 aa6.96□□□□□ -1.3
FGD6-203ENST00000546711 DYNC2H1Q8NCM8 4307 aaKnown RBP6.96□□□□□ -1.3
FGD6-203ENST00000546711 PLAC4Q8WY50 150 aa6.93□□□□□ -1.3
FGD6-203ENST00000546711 HECTD4Q9Y4D8 3996 aa6.92□□□□□ -1.3
FGD6-203ENST00000546711 TNP1P09430 55 aa6.84□□□□□ -1.32
FGD6-203ENST00000546711 PP632Q6XCG6 107 aa6.83□□□□□ -1.32
FGD6-203ENST00000546711 DNAH6Q9C0G6 4158 aa6.82□□□□□ -1.32
FGD6-203ENST00000546711 VPS13BQ7Z7G8 4022 aa6.81□□□□□ -1.32
FGD6-203ENST00000546711 DNHD1Q96M86 4753 aa6.8□□□□□ -1.32
FGD6-203ENST00000546711 FAT1Q14517 4588 aa6.79□□□□□ -1.32
FGD6-203ENST00000546711 DYNC1H1Q14204 4646 aaKnown RBP6.78□□□□□ -1.32
FGD6-203ENST00000546711 MT1HL1P0DM35 61 aa6.77□□□□□ -1.32
FGD6-203ENST00000546711 SACSQ9NZJ4 4579 aa6.73□□□□□ -1.33
FGD6-203ENST00000546711 KRTAP15-1Q3LI76 137 aa6.69□□□□□ -1.34
FGD6-203ENST00000546711 FAT2Q9NYQ8 4349 aa6.61□□□□□ -1.35
FGD6-203ENST00000546711 HYDINQ4G0P3 5121 aa6.56□□□□□ -1.36
FGD6-203ENST00000546711 MYCBP2O75592 4640 aa6.48□□□□□ -1.37
FGD6-203ENST00000546711 KRTAP4-5Q9BYR2 181 aa6.47□□□□□ -1.37
FGD6-203ENST00000546711 LORP23490 312 aaPredicted RBP6.46□□□□□ -1.37
FGD6-203ENST00000546711 APOBP04114 4563 aaKnown RBP6.46□□□□□ -1.38
FGD6-203ENST00000546711 KRTAP10-10P60014 251 aa6.43□□□□□ -1.38
FGD6-203ENST00000546711 PKHD1P08F94 4074 aa6.42□□□□□ -1.38
FGD6-203ENST00000546711 PKD1P98161 4303 aa6.42□□□□□ -1.38
FGD6-203ENST00000546711 LRP1Q07954 4544 aaKnown RBP6.4□□□□□ -1.38
FGD6-203ENST00000546711 FAT3Q8TDW7 4589 aa6.36□□□□□ -1.39
FGD6-203ENST00000546711 RYR1P21817 5038 aa6.32□□□□□ -1.4
FGD6-203ENST00000546711 KRTAP4-1Q9BYQ7 146 aa6.25□□□□□ -1.41
FGD6-203ENST00000546711 KIAA1109Q2LD37 5005 aa6.23□□□□□ -1.41
FGD6-203ENST00000546711 KRTAP17-1Q9BYP8 105 aa6.23□□□□□ -1.41
FGD6-203ENST00000546711 RYR2Q92736 4967 aa6.22□□□□□ -1.41
FGD6-203ENST00000546711 PKHD1L1Q86WI1 4243 aa6.19□□□□□ -1.42
FGD6-203ENST00000546711 RYR3Q15413 4870 aa6.17□□□□□ -1.42
FGD6-203ENST00000546711 LRP2P98164 4655 aa6.1□□□□□ -1.43
FGD6-203ENST00000546711 PRO2289Q9P1D8 64 aa6.1□□□□□ -1.43
FGD6-203ENST00000546711 HSPG2P98160 4391 aa6.09□□□□□ -1.43
FGD6-203ENST00000546711 KRTAP23-1A1A580 65 aa6.06□□□□□ -1.44
FGD6-203ENST00000546711 KMT2CQ8NEZ4 4911 aaKnown RBP6.05□□□□□ -1.44
FGD6-203ENST00000546711 TNXBP22105 4242 aa6.05□□□□□ -1.44
FGD6-203ENST00000546711 LCE3AQ5TA76 89 aa5.99□□□□□ -1.45
FGD6-203ENST00000546711 LPAP08519 4548 aa5.93□□□□□ -1.46
FGD6-203ENST00000546711 KRTAP10-12P60413 245 aa5.89□□□□□ -1.47
FGD6-203ENST00000546711 KRTAP12-3P60328 96 aa5.84□□□□□ -1.47
FGD6-203ENST00000546711 SPRR2GQ9BYE4 73 aa5.82□□□□□ -1.48
FGD6-203ENST00000546711 INE1O15225 51 aa5.75□□□□□ -1.49
FGD6-203ENST00000546711 MT1HP80294 61 aa5.75□□□□□ -1.49
FGD6-203ENST00000546711 HERC2O95714 4834 aa5.74□□□□□ -1.49
FGD6-203ENST00000546711 MT2AP02795 61 aa5.72□□□□□ -1.49
FGD6-203ENST00000546711 MT1FP04733 61 aa5.68□□□□□ -1.5
FGD6-203ENST00000546711 KRTAP19-1Q8IUB9 90 aa5.66□□□□□ -1.5
FGD6-203ENST00000546711 KRTAP19-2Q3LHN2 52 aa5.64□□□□□ -1.51
FGD6-203ENST00000546711 EPPK1P58107 5090 aaKnown RBP5.63□□□□□ -1.51
FGD6-203ENST00000546711 ABCA13Q86UQ4 5058 aa5.59□□□□□ -1.52
FGD6-203ENST00000546711 KRTAP8-1Q8IUC2 63 aa5.56□□□□□ -1.52
FGD6-203ENST00000546711 SPRR5A0A1B0GTR4 108 aa5.54□□□□□ -1.52
FGD6-203ENST00000546711 MUC17Q685J3 4493 aa5.54□□□□□ -1.52
FGD6-203ENST00000546711 FLGP20930 4061 aaPredicted RBP5.51□□□□□ -1.53
FGD6-203ENST00000546711 LCE2CQ5TA81 110 aa5.51□□□□□ -1.53
FGD6-203ENST00000546711 HERC1Q15751 4861 aa5.46□□□□□ -1.53
FGD6-203ENST00000546711 KRTAP19-8Q3LI54 63 aa5.46□□□□□ -1.54
FGD6-203ENST00000546711 BIRC6Q9NR09 4857 aa5.41□□□□□ -1.54
FGD6-203ENST00000546711 MT1XP80297 61 aa5.41□□□□□ -1.54
FGD6-203ENST00000546711 KRTAP10-7P60409 375 aaPredicted RBP5.4□□□□□ -1.54
FGD6-203ENST00000546711 KRTAP9-8Q9BYQ0 159 aa5.4□□□□□ -1.55
FGD6-203ENST00000546711 KRTAP10-5P60370 271 aa5.39□□□□□ -1.55
FGD6-203ENST00000546711 KRTAP19-5Q3LI72 72 aa5.38□□□□□ -1.55
FGD6-203ENST00000546711 MT1BP07438 61 aa5.38□□□□□ -1.55
FGD6-203ENST00000546711 MUC2Q02817 5179 aa5.34□□□□□ -1.55
FGD6-203ENST00000546711 LCE3CQ5T5A8 94 aa5.31□□□□□ -1.56
FGD6-203ENST00000546711 CRCT1Q9UGL9 99 aa5.28□□□□□ -1.56
FGD6-203ENST00000546711 PCLOQ9Y6V0 5065 aa5.28□□□□□ -1.56
FGD6-203ENST00000546711 KRTAP9-3Q9BYQ3 159 aa5.19□□□□□ -1.58
FGD6-203ENST00000546711 FAT4Q6V0I7 4981 aa5.17□□□□□ -1.58
FGD6-203ENST00000546711 HMCN2Q8NDA2 5059 aa5.15□□□□□ -1.58
FGD6-203ENST00000546711 RNF213Q63HN8 5207 aa5.13□□□□□ -1.59
FGD6-203ENST00000546711 KRTAP4-8A0A0G2JLE6 195 aa5.09□□□□□ -1.59
FGD6-203ENST00000546711 KRTAP4-8Q9BYQ9 185 aa5.09□□□□□ -1.59
FGD6-203ENST00000546711 UBR4Q5T4S7 5183 aa5□□□□□ -1.61
FGD6-203ENST00000546711 LCE2BO14633 110 aa4.98□□□□□ -1.61
FGD6-203ENST00000546711 KRTAP19-4Q3LI73 84 aa4.94□□□□□ -1.62
FGD6-203ENST00000546711 KRTAP4-7Q9BYR0 210 aa4.91□□□□□ -1.62
FGD6-203ENST00000546711 MT1GP13640 62 aa4.78□□□□□ -1.64
FGD6-203ENST00000546711 MT1LQ93083 61 aa4.78□□□□□ -1.64
FGD6-203ENST00000546711 SPRR2FQ96RM1 72 aa4.75□□□□□ -1.65
FGD6-203ENST00000546711 MT1EP04732 61 aa4.74□□□□□ -1.65
FGD6-203ENST00000546711 LCE2DQ5TA82 110 aaPredicted RBP4.7□□□□□ -1.66
FGD6-203ENST00000546711 KRTAP19-7Q3SYF9 63 aa4.7□□□□□ -1.66
FGD6-203ENST00000546711 KRTAP12-4P60329 112 aa4.67□□□□□ -1.66
FGD6-203ENST00000546711 KRTAP9-6A8MVA2 160 aa4.63□□□□□ -1.67
FGD6-203ENST00000546711 LCE3BQ5TA77 95 aa4.62□□□□□ -1.67
FGD6-203ENST00000546711 LCE2AQ5TA79 106 aaPredicted RBP4.6□□□□□ -1.67
FGD6-203ENST00000546711 KRTAP2-3P0C7H8 128 aa4.58□□□□□ -1.68
FGD6-203ENST00000546711 KRTAP2-4Q9BYR9 128 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms