RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 SRRM2Q9UQ35 2752 aaKnown RBP3.54□□□□□ -1.84
SNHG1-225ENST00000545920 HECTD4Q9Y4D8 3996 aa3.53□□□□□ -1.84
SNHG1-225ENST00000545920 PLECQ15149 4684 aaKnown RBP3.53□□□□□ -1.84
SNHG1-225ENST00000545920 DNAH7Q8WXX0 4024 aa3.53□□□□□ -1.85
SNHG1-225ENST00000545920 PRKDCP78527 4128 aaKnown RBP3.52□□□□□ -1.85
SNHG1-225ENST00000545920 K7ERS5 55 aa3.51□□□□□ -1.85
SNHG1-225ENST00000545920 DNAH8Q96JB1 4490 aa3.51□□□□□ -1.85
SNHG1-225ENST00000545920 A0A1B0GU33 70 aa3.5□□□□□ -1.85
SNHG1-225ENST00000545920 KRTAP10-6P60371 365 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-225ENST00000545920 CSMD3Q7Z407 3707 aa3.48□□□□□ -1.85
SNHG1-225ENST00000545920 KRTAP21-3Q3LHN1 58 aa3.48□□□□□ -1.85
SNHG1-225ENST00000545920 H1FX-AS1Q4G0G2 97 aa3.48□□□□□ -1.85
SNHG1-225ENST00000545920 COL7A1Q02388 2944 aa3.47□□□□□ -1.85
SNHG1-225ENST00000545920 DNAH2Q9P225 4427 aa3.47□□□□□ -1.85
SNHG1-225ENST00000545920 COX6B2Q6YFQ2 88 aa3.47□□□□□ -1.85
SNHG1-225ENST00000545920 STARD9Q9P2P6 4700 aa3.46□□□□□ -1.86
SNHG1-225ENST00000545920 H0YAA0 97 aa3.46□□□□□ -1.86
SNHG1-225ENST00000545920 CSAG1Q6PB30 78 aa3.45□□□□□ -1.86
SNHG1-225ENST00000545920 ADM2Q7Z4H4 148 aa3.45□□□□□ -1.86
SNHG1-225ENST00000545920 FRAS1Q86XX4 4008 aa3.44□□□□□ -1.86
SNHG1-225ENST00000545920 KRTAP25-1Q3LHN0 102 aa3.43□□□□□ -1.86
SNHG1-225ENST00000545920 DNAH11Q96DT5 4516 aa3.42□□□□□ -1.86
SNHG1-225ENST00000545920 MEGF8Q7Z7M0 2845 aa3.42□□□□□ -1.86
SNHG1-225ENST00000545920 KMT2AQ03164 3969 aa3.42□□□□□ -1.86
SNHG1-225ENST00000545920 RYR1P21817 5038 aa3.42□□□□□ -1.86
SNHG1-225ENST00000545920 NDUFAF8A1L188 74 aa3.41□□□□□ -1.86
SNHG1-225ENST00000545920 KRTAP10-4P60372 401 aaPredicted RBP3.4□□□□□ -1.87
SNHG1-225ENST00000545920 A0A1B0GVY2 172 aa3.39□□□□□ -1.87
SNHG1-225ENST00000545920 C9orf92A6NGG3 77 aa3.39□□□□□ -1.87
SNHG1-225ENST00000545920 KRTAP2-2Q9BYT5 123 aa3.39□□□□□ -1.87
SNHG1-225ENST00000545920 DNAH5Q8TE73 4624 aa3.38□□□□□ -1.87
SNHG1-225ENST00000545920 SACSQ9NZJ4 4579 aa3.37□□□□□ -1.87
SNHG1-225ENST00000545920 ROMO1P60602 79 aa3.37□□□□□ -1.87
SNHG1-225ENST00000545920 RPL37P61927 97 aaKnown RBP3.37□□□□□ -1.87
SNHG1-225ENST00000545920 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
SNHG1-225ENST00000545920 TGP01266 2768 aa3.37□□□□□ -1.87
SNHG1-225ENST00000545920 LRP1BQ9NZR2 4599 aa3.33□□□□□ -1.88
SNHG1-225ENST00000545920 KRTAP10-8P60410 259 aa3.33□□□□□ -1.88
SNHG1-225ENST00000545920 VPS13BQ7Z7G8 4022 aa3.33□□□□□ -1.88
SNHG1-225ENST00000545920 KIAA1109Q2LD37 5005 aa3.33□□□□□ -1.88
SNHG1-225ENST00000545920 SMR3BP02814 79 aaPredicted RBP3.32□□□□□ -1.88
SNHG1-225ENST00000545920 S4R3F8 94 aa3.32□□□□□ -1.88
SNHG1-225ENST00000545920 PKD1P98161 4303 aa3.3□□□□□ -1.88
SNHG1-225ENST00000545920 FAT2Q9NYQ8 4349 aa3.3□□□□□ -1.88
SNHG1-225ENST00000545920 MT3P25713 68 aa3.3□□□□□ -1.88
SNHG1-225ENST00000545920 PKHD1L1Q86WI1 4243 aa3.3□□□□□ -1.88
SNHG1-225ENST00000545920 M0QZ58 72 aa3.28□□□□□ -1.88
SNHG1-225ENST00000545920 RYR3Q15413 4870 aa3.26□□□□□ -1.89
SNHG1-225ENST00000545920 BIRC6Q9NR09 4857 aa3.25□□□□□ -1.89
SNHG1-225ENST00000545920 FLG2Q5D862 2391 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-225ENST00000545920 CRIPTQ9P021 101 aa3.24□□□□□ -1.89
SNHG1-225ENST00000545920 PKHD1P08F94 4074 aa3.24□□□□□ -1.89
SNHG1-225ENST00000545920 HYDINQ4G0P3 5121 aa3.23□□□□□ -1.89
SNHG1-225ENST00000545920 TPRXLQ17RH7 258 aa3.22□□□□□ -1.89
SNHG1-225ENST00000545920 KRTAP13-4Q3LI77 160 aa3.22□□□□□ -1.89
SNHG1-225ENST00000545920 APOBP04114 4563 aaKnown RBP3.22□□□□□ -1.89
SNHG1-225ENST00000545920 Q5VSD8 79 aa3.21□□□□□ -1.9
SNHG1-225ENST00000545920 DYNC1H1Q14204 4646 aaKnown RBP3.2□□□□□ -1.9
SNHG1-225ENST00000545920 A0A0D9SG42 100 aa3.19□□□□□ -1.9
SNHG1-225ENST00000545920 P0C880 135 aa3.19□□□□□ -1.9
SNHG1-225ENST00000545920 KRTAP5-1Q6L8H4 278 aa3.18□□□□□ -1.9
SNHG1-225ENST00000545920 KRTAP12-1P59990 96 aa3.17□□□□□ -1.9
SNHG1-225ENST00000545920 SPINT4Q6UDR6 99 aa3.17□□□□□ -1.9
SNHG1-225ENST00000545920 MT1HL1P0DM35 61 aa3.15□□□□□ -1.91
SNHG1-225ENST00000545920 MUC2Q02817 5179 aa3.15□□□□□ -1.91
SNHG1-225ENST00000545920 TNXBP22105 4242 aa3.14□□□□□ -1.91
SNHG1-225ENST00000545920 KRTAP12-2P59991 146 aa3.14□□□□□ -1.91
SNHG1-225ENST00000545920 DMBT1Q9UGM3 2413 aaPredicted RBP3.14□□□□□ -1.91
SNHG1-225ENST00000545920 EPPK1P58107 5090 aaKnown RBP3.14□□□□□ -1.91
SNHG1-225ENST00000545920 KRTAP5-4Q6L8H1 288 aa3.1□□□□□ -1.91
SNHG1-225ENST00000545920 FAT1Q14517 4588 aa3.1□□□□□ -1.91
SNHG1-225ENST00000545920 KMT2CQ8NEZ4 4911 aaKnown RBP3.1□□□□□ -1.91
SNHG1-225ENST00000545920 KRTAP5-9P26371 169 aa3.09□□□□□ -1.91
SNHG1-225ENST00000545920 FAT3Q8TDW7 4589 aa3.09□□□□□ -1.92
SNHG1-225ENST00000545920 PP632Q6XCG6 107 aa3.08□□□□□ -1.92
SNHG1-225ENST00000545920 R4GN34 69 aa3.08□□□□□ -1.92
SNHG1-225ENST00000545920 LRP1Q07954 4544 aaKnown RBP3.07□□□□□ -1.92
SNHG1-225ENST00000545920 HSPG2P98160 4391 aa3.07□□□□□ -1.92
SNHG1-225ENST00000545920 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
SNHG1-225ENST00000545920 C10orf95Q9H7T3 257 aa3.06□□□□□ -1.92
SNHG1-225ENST00000545920 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
SNHG1-225ENST00000545920 RYR2Q92736 4967 aa3.03□□□□□ -1.92
SNHG1-225ENST00000545920 CAMK2N1Q7Z7J9 78 aa3.02□□□□□ -1.93
SNHG1-225ENST00000545920 PLAC4Q8WY50 150 aa2.97□□□□□ -1.93
SNHG1-225ENST00000545920 MYCBP2O75592 4640 aa2.97□□□□□ -1.93
SNHG1-225ENST00000545920 KRTAP10-5P60370 271 aa2.96□□□□□ -1.94
SNHG1-225ENST00000545920 LUZP6Q538Z0 58 aa2.92□□□□□ -1.94
SNHG1-225ENST00000545920 KRTAP9-6A8MVA2 160 aa2.91□□□□□ -1.94
SNHG1-225ENST00000545920 KRTAP19-2Q3LHN2 52 aa2.9□□□□□ -1.95
SNHG1-225ENST00000545920 TNP1P09430 55 aa2.89□□□□□ -1.95
SNHG1-225ENST00000545920 ABCA13Q86UQ4 5058 aa2.89□□□□□ -1.95
SNHG1-225ENST00000545920 HERC2O95714 4834 aa2.89□□□□□ -1.95
SNHG1-225ENST00000545920 KRTAP10-12P60413 245 aa2.87□□□□□ -1.95
SNHG1-225ENST00000545920 LCE3CQ5T5A8 94 aa2.85□□□□□ -1.95
SNHG1-225ENST00000545920 KRTAP4-1Q9BYQ7 146 aa2.85□□□□□ -1.95
SNHG1-225ENST00000545920 HERC1Q15751 4861 aa2.84□□□□□ -1.95
SNHG1-225ENST00000545920 GPR98Q8WXG9 6306 aa2.84□□□□□ -1.96
SNHG1-225ENST00000545920 SPRR5A0A1B0GTR4 108 aa2.82□□□□□ -1.96
SNHG1-225ENST00000545920 MUC17Q685J3 4493 aa2.8□□□□□ -1.96
SNHG1-225ENST00000545920 LRP2P98164 4655 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 168.1 ms