RNA–Protein interactions for RNA: ENST00000544802.5

GTF2IP4-202, Transcript of general transcription factor IIi pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene GTF2IP4, Length 3,609 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IP4-202ENST00000544802 CAMK2N1Q7Z7J9 78 aa9.28□□□□□ -0.92
GTF2IP4-202ENST00000544802 ALMS1Q8TCU4 4167 aa9.26□□□□□ -0.93
GTF2IP4-202ENST00000544802 DYNC2H1Q8NCM8 4307 aaKnown RBP9.24□□□□□ -0.93
GTF2IP4-202ENST00000544802 RPS29P62273 56 aaKnown RBP9.23□□□□□ -0.93
GTF2IP4-202ENST00000544802 KRTAP10-6P60371 365 aaPredicted RBP9.23□□□□□ -0.93
GTF2IP4-202ENST00000544802 XP32Q5T750 250 aa9.23□□□□□ -0.93
GTF2IP4-202ENST00000544802 HYDINQ4G0P3 5121 aa9.17□□□□□ -0.94
GTF2IP4-202ENST00000544802 FAT3Q8TDW7 4589 aa9.17□□□□□ -0.94
GTF2IP4-202ENST00000544802 PKHD1P08F94 4074 aa9.14□□□□□ -0.95
GTF2IP4-202ENST00000544802 LUZP6Q538Z0 58 aa9.13□□□□□ -0.95
GTF2IP4-202ENST00000544802 DYNC1H1Q14204 4646 aaKnown RBP9.1□□□□□ -0.95
GTF2IP4-202ENST00000544802 LRP1Q07954 4544 aaKnown RBP9.1□□□□□ -0.95
GTF2IP4-202ENST00000544802 KRTAP3-3Q9BYR6 98 aa9.08□□□□□ -0.96
GTF2IP4-202ENST00000544802 J3QL48 77 aa9.04□□□□□ -0.96
GTF2IP4-202ENST00000544802 KRTAP12-1P59990 96 aa9.03□□□□□ -0.96
GTF2IP4-202ENST00000544802 KRTAP3-2Q9BYR7 98 aa9.03□□□□□ -0.96
GTF2IP4-202ENST00000544802 FAT2Q9NYQ8 4349 aa9.03□□□□□ -0.96
GTF2IP4-202ENST00000544802 APOBP04114 4563 aaKnown RBP8.97□□□□□ -0.97
GTF2IP4-202ENST00000544802 KMT2CQ8NEZ4 4911 aaKnown RBP8.93□□□□□ -0.98
GTF2IP4-202ENST00000544802 SACSQ9NZJ4 4579 aa8.92□□□□□ -0.98
GTF2IP4-202ENST00000544802 PLAC4Q8WY50 150 aa8.9□□□□□ -0.98
GTF2IP4-202ENST00000544802 A0A1B0GVY2 172 aa8.86□□□□□ -0.99
GTF2IP4-202ENST00000544802 KRTAP15-1Q3LI76 137 aa8.8□□□□□ -1
GTF2IP4-202ENST00000544802 KRTAP10-4P60372 401 aaPredicted RBP8.79□□□□□ -1
GTF2IP4-202ENST00000544802 PKD1P98161 4303 aa8.76□□□□□ -1.01
GTF2IP4-202ENST00000544802 A0A0A0MQY5 61 aa8.74□□□□□ -1.01
GTF2IP4-202ENST00000544802 KIAA1109Q2LD37 5005 aa8.73□□□□□ -1.01
GTF2IP4-202ENST00000544802 RYR2Q92736 4967 aa8.72□□□□□ -1.01
GTF2IP4-202ENST00000544802 LRP2P98164 4655 aa8.72□□□□□ -1.01
GTF2IP4-202ENST00000544802 RYR1P21817 5038 aa8.7□□□□□ -1.02
GTF2IP4-202ENST00000544802 M0R2T5 61 aa8.69□□□□□ -1.02
GTF2IP4-202ENST00000544802 SEC61BP60468 96 aaKnown RBP8.68□□□□□ -1.02
GTF2IP4-202ENST00000544802 HSPG2P98160 4391 aa8.67□□□□□ -1.02
GTF2IP4-202ENST00000544802 LORP23490 312 aaPredicted RBP8.66□□□□□ -1.02
GTF2IP4-202ENST00000544802 RYR3Q15413 4870 aa8.63□□□□□ -1.03
GTF2IP4-202ENST00000544802 LPAP08519 4548 aa8.49□□□□□ -1.05
GTF2IP4-202ENST00000544802 MT1HL1P0DM35 61 aa8.47□□□□□ -1.05
GTF2IP4-202ENST00000544802 KRTAP4-5Q9BYR2 181 aa8.43□□□□□ -1.06
GTF2IP4-202ENST00000544802 TNP1P09430 55 aa8.43□□□□□ -1.06
GTF2IP4-202ENST00000544802 EPPK1P58107 5090 aaKnown RBP8.39□□□□□ -1.07
GTF2IP4-202ENST00000544802 KRTAP17-1Q9BYP8 105 aa8.39□□□□□ -1.07
GTF2IP4-202ENST00000544802 MUC2Q02817 5179 aa8.25□□□□□ -1.09
GTF2IP4-202ENST00000544802 PKHD1L1Q86WI1 4243 aa8.23□□□□□ -1.09
GTF2IP4-202ENST00000544802 PP632Q6XCG6 107 aa8.2□□□□□ -1.1
GTF2IP4-202ENST00000544802 KRTAP4-1Q9BYQ7 146 aa8.16□□□□□ -1.1
GTF2IP4-202ENST00000544802 ABCA13Q86UQ4 5058 aa8.09□□□□□ -1.11
GTF2IP4-202ENST00000544802 KRTAP10-10P60014 251 aa8.01□□□□□ -1.13
GTF2IP4-202ENST00000544802 TNXBP22105 4242 aa7.99□□□□□ -1.13
GTF2IP4-202ENST00000544802 HERC2O95714 4834 aa7.94□□□□□ -1.14
GTF2IP4-202ENST00000544802 FAT4Q6V0I7 4981 aa7.84□□□□□ -1.15
GTF2IP4-202ENST00000544802 BIRC6Q9NR09 4857 aa7.81□□□□□ -1.16
GTF2IP4-202ENST00000544802 RNF213Q63HN8 5207 aa7.75□□□□□ -1.17
GTF2IP4-202ENST00000544802 LCE3AQ5TA76 89 aa7.74□□□□□ -1.17
GTF2IP4-202ENST00000544802 PCLOQ9Y6V0 5065 aa7.68□□□□□ -1.18
GTF2IP4-202ENST00000544802 HERC1Q15751 4861 aa7.67□□□□□ -1.18
GTF2IP4-202ENST00000544802 HMCN2Q8NDA2 5059 aa7.47□□□□□ -1.21
GTF2IP4-202ENST00000544802 UBR4Q5T4S7 5183 aa7.37□□□□□ -1.23
GTF2IP4-202ENST00000544802 KRTAP12-3P60328 96 aa7.37□□□□□ -1.23
GTF2IP4-202ENST00000544802 KRTAP10-12P60413 245 aa7.34□□□□□ -1.23
GTF2IP4-202ENST00000544802 MUC17Q685J3 4493 aa7.32□□□□□ -1.24
GTF2IP4-202ENST00000544802 FSIP2Q5CZC0 6907 aa7.3□□□□□ -1.24
GTF2IP4-202ENST00000544802 KRTAP19-1Q8IUB9 90 aa7.27□□□□□ -1.25
GTF2IP4-202ENST00000544802 MT1FP04733 61 aa7.25□□□□□ -1.25
GTF2IP4-202ENST00000544802 PRO2289Q9P1D8 64 aa7.25□□□□□ -1.25
GTF2IP4-202ENST00000544802 KRTAP19-2Q3LHN2 52 aa7.23□□□□□ -1.25
GTF2IP4-202ENST00000544802 OBSCNQ5VST9 7968 aa7.23□□□□□ -1.25
GTF2IP4-202ENST00000544802 FLGP20930 4061 aaPredicted RBP7.2□□□□□ -1.26
GTF2IP4-202ENST00000544802 MT2AP02795 61 aa7.18□□□□□ -1.26
GTF2IP4-202ENST00000544802 MT1HP80294 61 aa7.15□□□□□ -1.26
GTF2IP4-202ENST00000544802 SPRR2GQ9BYE4 73 aa7.14□□□□□ -1.27
GTF2IP4-202ENST00000544802 KMT2DO14686 5537 aa7.11□□□□□ -1.27
GTF2IP4-202ENST00000544802 USH2AO75445 5202 aa7.11□□□□□ -1.27
GTF2IP4-202ENST00000544802 KRTAP23-1A1A580 65 aa7.09□□□□□ -1.27
GTF2IP4-202ENST00000544802 CRCT1Q9UGL9 99 aa7.08□□□□□ -1.28
GTF2IP4-202ENST00000544802 KRTAP10-7P60409 375 aaPredicted RBP7.07□□□□□ -1.28
GTF2IP4-202ENST00000544802 SPRR5A0A1B0GTR4 108 aa7.06□□□□□ -1.28
GTF2IP4-202ENST00000544802 INE1O15225 51 aa7.03□□□□□ -1.28
GTF2IP4-202ENST00000544802 LCE2CQ5TA81 110 aa7□□□□□ -1.29
GTF2IP4-202ENST00000544802 KRTAP8-1Q8IUC2 63 aa6.95□□□□□ -1.3
GTF2IP4-202ENST00000544802 SYNE1Q8NF91 8797 aaKnown RBP6.93□□□□□ -1.3
GTF2IP4-202ENST00000544802 KRTAP19-5Q3LI72 72 aa6.9□□□□□ -1.3
GTF2IP4-202ENST00000544802 MT1XP80297 61 aa6.9□□□□□ -1.31
GTF2IP4-202ENST00000544802 KRTAP10-5P60370 271 aa6.88□□□□□ -1.31
GTF2IP4-202ENST00000544802 KRTAP4-8A0A0G2JLE6 195 aa6.86□□□□□ -1.31
GTF2IP4-202ENST00000544802 KRTAP4-8Q9BYQ9 185 aa6.86□□□□□ -1.31
GTF2IP4-202ENST00000544802 DSTQ03001 7570 aaKnown RBP6.85□□□□□ -1.31
GTF2IP4-202ENST00000544802 MT1BP07438 61 aa6.83□□□□□ -1.32
GTF2IP4-202ENST00000544802 KRTAP9-8Q9BYQ0 159 aa6.81□□□□□ -1.32
GTF2IP4-202ENST00000544802 KRTAP4-7Q9BYR0 210 aa6.79□□□□□ -1.32
GTF2IP4-202ENST00000544802 FCGBPQ9Y6R7 5405 aaPredicted RBP6.69□□□□□ -1.34
GTF2IP4-202ENST00000544802 LCE3CQ5T5A8 94 aa6.68□□□□□ -1.34
GTF2IP4-202ENST00000544802 KRTAP19-8Q3LI54 63 aa6.62□□□□□ -1.35
GTF2IP4-202ENST00000544802 KRTAP9-3Q9BYQ3 159 aa6.47□□□□□ -1.37
GTF2IP4-202ENST00000544802 LCE2BO14633 110 aa6.41□□□□□ -1.38
GTF2IP4-202ENST00000544802 KRTAP9-6A8MVA2 160 aa6.37□□□□□ -1.39
GTF2IP4-202ENST00000544802 LOC100996750A0A140TA64 210 aa6.28□□□□□ -1.4
GTF2IP4-202ENST00000544802 MUC12Q9UKN1 5478 aa6.27□□□□□ -1.41
GTF2IP4-202ENST00000544802 MT1GP13640 62 aa6.26□□□□□ -1.41
GTF2IP4-202ENST00000544802 KRTAP4-3Q9BYR4 195 aa6.26□□□□□ -1.41
GTF2IP4-202ENST00000544802 LCE2AQ5TA79 106 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms