RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 KMT2AQ03164 3969 aa6.81□□□□□ -1.32
RPS6KC1-206ENST00000543354 PP632Q6XCG6 107 aa6.81□□□□□ -1.32
RPS6KC1-206ENST00000543354 STARD9Q9P2P6 4700 aa6.8□□□□□ -1.32
RPS6KC1-206ENST00000543354 PRKDCP78527 4128 aaKnown RBP6.79□□□□□ -1.32
RPS6KC1-206ENST00000543354 DNHD1Q96M86 4753 aa6.79□□□□□ -1.32
RPS6KC1-206ENST00000543354 LRP1BQ9NZR2 4599 aa6.73□□□□□ -1.33
RPS6KC1-206ENST00000543354 DNAH2Q9P225 4427 aa6.71□□□□□ -1.33
RPS6KC1-206ENST00000543354 DNAH6Q9C0G6 4158 aa6.69□□□□□ -1.34
RPS6KC1-206ENST00000543354 HECTD4Q9Y4D8 3996 aa6.68□□□□□ -1.34
RPS6KC1-206ENST00000543354 VPS13DQ5THJ4 4388 aa6.66□□□□□ -1.34
RPS6KC1-206ENST00000543354 KRTAP21-3Q3LHN1 58 aa6.66□□□□□ -1.34
RPS6KC1-206ENST00000543354 DYNC2H1Q8NCM8 4307 aaKnown RBP6.62□□□□□ -1.35
RPS6KC1-206ENST00000543354 KRTAP10-10P60014 251 aa6.6□□□□□ -1.35
RPS6KC1-206ENST00000543354 KRTAP3-2Q9BYR7 98 aa6.59□□□□□ -1.35
RPS6KC1-206ENST00000543354 KRTAP3-3Q9BYR6 98 aa6.58□□□□□ -1.36
RPS6KC1-206ENST00000543354 VPS13BQ7Z7G8 4022 aa6.55□□□□□ -1.36
RPS6KC1-206ENST00000543354 FAT1Q14517 4588 aa6.51□□□□□ -1.37
RPS6KC1-206ENST00000543354 KRTAP15-1Q3LI76 137 aa6.51□□□□□ -1.37
RPS6KC1-206ENST00000543354 DNAH5Q8TE73 4624 aa6.5□□□□□ -1.37
RPS6KC1-206ENST00000543354 MYCBP2O75592 4640 aa6.44□□□□□ -1.38
RPS6KC1-206ENST00000543354 HYDINQ4G0P3 5121 aa6.36□□□□□ -1.39
RPS6KC1-206ENST00000543354 MT1HL1P0DM35 61 aa6.35□□□□□ -1.39
RPS6KC1-206ENST00000543354 KRTAP10-4P60372 401 aaPredicted RBP6.35□□□□□ -1.39
RPS6KC1-206ENST00000543354 DYNC1H1Q14204 4646 aaKnown RBP6.3□□□□□ -1.4
RPS6KC1-206ENST00000543354 PKHD1P08F94 4074 aa6.28□□□□□ -1.4
RPS6KC1-206ENST00000543354 FAT2Q9NYQ8 4349 aa6.27□□□□□ -1.4
RPS6KC1-206ENST00000543354 LORP23490 312 aaPredicted RBP6.25□□□□□ -1.41
RPS6KC1-206ENST00000543354 APOBP04114 4563 aaKnown RBP6.23□□□□□ -1.41
RPS6KC1-206ENST00000543354 SACSQ9NZJ4 4579 aa6.22□□□□□ -1.41
RPS6KC1-206ENST00000543354 LRP1Q07954 4544 aaKnown RBP6.21□□□□□ -1.42
RPS6KC1-206ENST00000543354 PRO2289Q9P1D8 64 aa6.2□□□□□ -1.42
RPS6KC1-206ENST00000543354 PKD1P98161 4303 aa6.2□□□□□ -1.42
RPS6KC1-206ENST00000543354 KRTAP4-5Q9BYR2 181 aa6.19□□□□□ -1.42
RPS6KC1-206ENST00000543354 FAT3Q8TDW7 4589 aa6.13□□□□□ -1.43
RPS6KC1-206ENST00000543354 KMT2CQ8NEZ4 4911 aaKnown RBP6.08□□□□□ -1.44
RPS6KC1-206ENST00000543354 RYR2Q92736 4967 aa6.07□□□□□ -1.44
RPS6KC1-206ENST00000543354 HSPG2P98160 4391 aa6.07□□□□□ -1.44
RPS6KC1-206ENST00000543354 RYR1P21817 5038 aa6.05□□□□□ -1.44
RPS6KC1-206ENST00000543354 LRP2P98164 4655 aa5.98□□□□□ -1.45
RPS6KC1-206ENST00000543354 KIAA1109Q2LD37 5005 aa5.94□□□□□ -1.46
RPS6KC1-206ENST00000543354 LCE3AQ5TA76 89 aa5.9□□□□□ -1.46
RPS6KC1-206ENST00000543354 RYR3Q15413 4870 aa5.9□□□□□ -1.47
RPS6KC1-206ENST00000543354 LPAP08519 4548 aa5.88□□□□□ -1.47
RPS6KC1-206ENST00000543354 KRTAP10-12P60413 245 aa5.87□□□□□ -1.47
RPS6KC1-206ENST00000543354 KRTAP4-1Q9BYQ7 146 aa5.87□□□□□ -1.47
RPS6KC1-206ENST00000543354 PKHD1L1Q86WI1 4243 aa5.84□□□□□ -1.47
RPS6KC1-206ENST00000543354 KRTAP12-3P60328 96 aa5.84□□□□□ -1.48
RPS6KC1-206ENST00000543354 KRTAP17-1Q9BYP8 105 aa5.82□□□□□ -1.48
RPS6KC1-206ENST00000543354 INE1O15225 51 aa5.77□□□□□ -1.49
RPS6KC1-206ENST00000543354 CRCT1Q9UGL9 99 aa5.74□□□□□ -1.49
RPS6KC1-206ENST00000543354 EPPK1P58107 5090 aaKnown RBP5.7□□□□□ -1.5
RPS6KC1-206ENST00000543354 TNXBP22105 4242 aa5.69□□□□□ -1.5
RPS6KC1-206ENST00000543354 KRTAP23-1A1A580 65 aa5.66□□□□□ -1.5
RPS6KC1-206ENST00000543354 HERC2O95714 4834 aa5.51□□□□□ -1.53
RPS6KC1-206ENST00000543354 ABCA13Q86UQ4 5058 aa5.5□□□□□ -1.53
RPS6KC1-206ENST00000543354 MUC2Q02817 5179 aa5.47□□□□□ -1.53
RPS6KC1-206ENST00000543354 MT2AP02795 61 aa5.43□□□□□ -1.54
RPS6KC1-206ENST00000543354 SPRR2GQ9BYE4 73 aa5.42□□□□□ -1.54
RPS6KC1-206ENST00000543354 MT1HP80294 61 aa5.41□□□□□ -1.54
RPS6KC1-206ENST00000543354 MT1FP04733 61 aa5.4□□□□□ -1.54
RPS6KC1-206ENST00000543354 KRTAP10-5P60370 271 aa5.38□□□□□ -1.55
RPS6KC1-206ENST00000543354 BIRC6Q9NR09 4857 aa5.36□□□□□ -1.55
RPS6KC1-206ENST00000543354 KRTAP8-1Q8IUC2 63 aa5.3□□□□□ -1.56
RPS6KC1-206ENST00000543354 KRTAP19-1Q8IUB9 90 aa5.3□□□□□ -1.56
RPS6KC1-206ENST00000543354 SPRR5A0A1B0GTR4 108 aa5.29□□□□□ -1.56
RPS6KC1-206ENST00000543354 SYNE1Q8NF91 8797 aaKnown RBP5.28□□□□□ -1.56
RPS6KC1-206ENST00000543354 PCLOQ9Y6V0 5065 aa5.28□□□□□ -1.56
RPS6KC1-206ENST00000543354 KRTAP19-5Q3LI72 72 aa5.26□□□□□ -1.57
RPS6KC1-206ENST00000543354 OBSCNQ5VST9 7968 aa5.24□□□□□ -1.57
RPS6KC1-206ENST00000543354 FAT4Q6V0I7 4981 aa5.23□□□□□ -1.57
RPS6KC1-206ENST00000543354 HERC1Q15751 4861 aa5.21□□□□□ -1.58
RPS6KC1-206ENST00000543354 MUC17Q685J3 4493 aa5.21□□□□□ -1.58
RPS6KC1-206ENST00000543354 KRTAP10-7P60409 375 aaPredicted RBP5.2□□□□□ -1.58
RPS6KC1-206ENST00000543354 KRTAP19-2Q3LHN2 52 aa5.19□□□□□ -1.58
RPS6KC1-206ENST00000543354 LCE3CQ5T5A8 94 aa5.15□□□□□ -1.59
RPS6KC1-206ENST00000543354 FSIP2Q5CZC0 6907 aa5.11□□□□□ -1.59
RPS6KC1-206ENST00000543354 UBR4Q5T4S7 5183 aa5.1□□□□□ -1.59
RPS6KC1-206ENST00000543354 FLGP20930 4061 aaPredicted RBP5.09□□□□□ -1.59
RPS6KC1-206ENST00000543354 MT1XP80297 61 aa5.07□□□□□ -1.6
RPS6KC1-206ENST00000543354 HMCN2Q8NDA2 5059 aa5.05□□□□□ -1.6
RPS6KC1-206ENST00000543354 RNF213Q63HN8 5207 aa5.02□□□□□ -1.61
RPS6KC1-206ENST00000543354 KRTAP4-8A0A0G2JLE6 195 aa5.01□□□□□ -1.61
RPS6KC1-206ENST00000543354 MT1BP07438 61 aa5.01□□□□□ -1.61
RPS6KC1-206ENST00000543354 KRTAP19-8Q3LI54 63 aa5.01□□□□□ -1.61
RPS6KC1-206ENST00000543354 KRTAP4-8Q9BYQ9 185 aa5.01□□□□□ -1.61
RPS6KC1-206ENST00000543354 LCE2CQ5TA81 110 aa4.97□□□□□ -1.61
RPS6KC1-206ENST00000543354 KRTAP9-8Q9BYQ0 159 aa4.97□□□□□ -1.61
RPS6KC1-206ENST00000543354 SPRR2FQ96RM1 72 aa4.87□□□□□ -1.63
RPS6KC1-206ENST00000543354 KRTAP4-7Q9BYR0 210 aa4.86□□□□□ -1.63
RPS6KC1-206ENST00000543354 KRTAP12-4P60329 112 aa4.81□□□□□ -1.64
RPS6KC1-206ENST00000543354 MT1GP13640 62 aa4.79□□□□□ -1.64
RPS6KC1-206ENST00000543354 LCE3BQ5TA77 95 aa4.77□□□□□ -1.65
RPS6KC1-206ENST00000543354 KRTAP9-3Q9BYQ3 159 aa4.77□□□□□ -1.65
RPS6KC1-206ENST00000543354 KMT2DO14686 5537 aa4.73□□□□□ -1.65
RPS6KC1-206ENST00000543354 DSTQ03001 7570 aaKnown RBP4.68□□□□□ -1.66
RPS6KC1-206ENST00000543354 FCGBPQ9Y6R7 5405 aaPredicted RBP4.68□□□□□ -1.66
RPS6KC1-206ENST00000543354 LCE2BO14633 110 aa4.65□□□□□ -1.67
RPS6KC1-206ENST00000543354 USH2AO75445 5202 aa4.65□□□□□ -1.67
RPS6KC1-206ENST00000543354 KRTAP9-6A8MVA2 160 aa4.54□□□□□ -1.68
RPS6KC1-206ENST00000543354 KRTAP19-4Q3LI73 84 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms