RNA–Protein interactions for RNA: ENST00000538966.5

PLXNB3-209, Transcript of plexin B3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PLXNB3, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-209ENST00000538966 LCE3AQ5TA76 89 aa6.16□□□□□ -1.42
PLXNB3-209ENST00000538966 KRTAP4-5Q9BYR2 181 aa6.16□□□□□ -1.42
PLXNB3-209ENST00000538966 SRRM2Q9UQ35 2752 aaKnown RBP6.14□□□□□ -1.43
PLXNB3-209ENST00000538966 DNAH1Q9P2D7 4330 aa6.13□□□□□ -1.43
PLXNB3-209ENST00000538966 LORP23490 312 aaPredicted RBP6.11□□□□□ -1.43
PLXNB3-209ENST00000538966 CMYA5Q8N3K9 4069 aa6.1□□□□□ -1.43
PLXNB3-209ENST00000538966 ANK2Q01484 3957 aa6.07□□□□□ -1.44
PLXNB3-209ENST00000538966 FRAS1Q86XX4 4008 aa6.07□□□□□ -1.44
PLXNB3-209ENST00000538966 DNAH3Q8TD57 4116 aa6.06□□□□□ -1.44
PLXNB3-209ENST00000538966 COL7A1Q02388 2944 aa6.06□□□□□ -1.44
PLXNB3-209ENST00000538966 KRTAP23-1A1A580 65 aa6.01□□□□□ -1.45
PLXNB3-209ENST00000538966 PLECQ15149 4684 aaKnown RBP6.01□□□□□ -1.45
PLXNB3-209ENST00000538966 LYSTQ99698 3801 aa6□□□□□ -1.45
PLXNB3-209ENST00000538966 KRTAP8-1Q8IUC2 63 aa5.99□□□□□ -1.45
PLXNB3-209ENST00000538966 KRTAP10-5P60370 271 aa5.99□□□□□ -1.45
PLXNB3-209ENST00000538966 KMT2AQ03164 3969 aa5.93□□□□□ -1.46
PLXNB3-209ENST00000538966 DNAH2Q9P225 4427 aa5.87□□□□□ -1.47
PLXNB3-209ENST00000538966 STARD9Q9P2P6 4700 aa5.84□□□□□ -1.47
PLXNB3-209ENST00000538966 DNAH11Q96DT5 4516 aa5.83□□□□□ -1.48
PLXNB3-209ENST00000538966 VPS13DQ5THJ4 4388 aa5.82□□□□□ -1.48
PLXNB3-209ENST00000538966 DNAH17Q9UFH2 4485 aa5.82□□□□□ -1.48
PLXNB3-209ENST00000538966 DNAH8Q96JB1 4490 aa5.79□□□□□ -1.48
PLXNB3-209ENST00000538966 DNAH7Q8WXX0 4024 aa5.79□□□□□ -1.48
PLXNB3-209ENST00000538966 DNAH5Q8TE73 4624 aa5.76□□□□□ -1.49
PLXNB3-209ENST00000538966 VPS13BQ7Z7G8 4022 aa5.72□□□□□ -1.49
PLXNB3-209ENST00000538966 PRKDCP78527 4128 aaKnown RBP5.69□□□□□ -1.5
PLXNB3-209ENST00000538966 HECTD4Q9Y4D8 3996 aa5.67□□□□□ -1.5
PLXNB3-209ENST00000538966 DYNC2H1Q8NCM8 4307 aaKnown RBP5.67□□□□□ -1.5
PLXNB3-209ENST00000538966 KRTAP4-1Q9BYQ7 146 aa5.67□□□□□ -1.5
PLXNB3-209ENST00000538966 DNAH6Q9C0G6 4158 aa5.66□□□□□ -1.5
PLXNB3-209ENST00000538966 FAT2Q9NYQ8 4349 aa5.63□□□□□ -1.51
PLXNB3-209ENST00000538966 LRP1BQ9NZR2 4599 aa5.6□□□□□ -1.51
PLXNB3-209ENST00000538966 KRTAP10-7P60409 375 aaPredicted RBP5.6□□□□□ -1.51
PLXNB3-209ENST00000538966 MT1HP80294 61 aa5.58□□□□□ -1.52
PLXNB3-209ENST00000538966 SPRR2FQ96RM1 72 aa5.57□□□□□ -1.52
PLXNB3-209ENST00000538966 DYNC1H1Q14204 4646 aaKnown RBP5.55□□□□□ -1.52
PLXNB3-209ENST00000538966 MT2AP02795 61 aa5.5□□□□□ -1.53
PLXNB3-209ENST00000538966 FAT1Q14517 4588 aa5.49□□□□□ -1.53
PLXNB3-209ENST00000538966 SACSQ9NZJ4 4579 aa5.48□□□□□ -1.53
PLXNB3-209ENST00000538966 KRTAP19-5Q3LI72 72 aa5.48□□□□□ -1.53
PLXNB3-209ENST00000538966 SPRR2GQ9BYE4 73 aa5.43□□□□□ -1.54
PLXNB3-209ENST00000538966 MT1FP04733 61 aa5.41□□□□□ -1.54
PLXNB3-209ENST00000538966 LCE3CQ5T5A8 94 aa5.38□□□□□ -1.55
PLXNB3-209ENST00000538966 DNHD1Q96M86 4753 aa5.37□□□□□ -1.55
PLXNB3-209ENST00000538966 SPRR2EP22531 72 aa5.35□□□□□ -1.55
PLXNB3-209ENST00000538966 SPRR2BP35325 72 aa5.35□□□□□ -1.55
PLXNB3-209ENST00000538966 SPRR2AP35326 72 aa5.35□□□□□ -1.55
PLXNB3-209ENST00000538966 APOBP04114 4563 aaKnown RBP5.26□□□□□ -1.57
PLXNB3-209ENST00000538966 KRTAP17-1Q9BYP8 105 aa5.22□□□□□ -1.57
PLXNB3-209ENST00000538966 PKHD1P08F94 4074 aa5.2□□□□□ -1.58
PLXNB3-209ENST00000538966 RYR1P21817 5038 aa5.2□□□□□ -1.58
PLXNB3-209ENST00000538966 HYDINQ4G0P3 5121 aa5.2□□□□□ -1.58
PLXNB3-209ENST00000538966 SPRR2DP22532 72 aa5.17□□□□□ -1.58
PLXNB3-209ENST00000538966 PKD1P98161 4303 aa5.15□□□□□ -1.58
PLXNB3-209ENST00000538966 LRP1Q07954 4544 aaKnown RBP5.15□□□□□ -1.58
PLXNB3-209ENST00000538966 FAT3Q8TDW7 4589 aa5.15□□□□□ -1.59
PLXNB3-209ENST00000538966 LPAP08519 4548 aa5.14□□□□□ -1.59
PLXNB3-209ENST00000538966 LCE3BQ5TA77 95 aa5.13□□□□□ -1.59
PLXNB3-209ENST00000538966 MYCBP2O75592 4640 aa5.13□□□□□ -1.59
PLXNB3-209ENST00000538966 HSPG2P98160 4391 aa5.12□□□□□ -1.59
PLXNB3-209ENST00000538966 RYR3Q15413 4870 aa5.11□□□□□ -1.59
PLXNB3-209ENST00000538966 KRTAP19-4Q3LI73 84 aa5.11□□□□□ -1.59
PLXNB3-209ENST00000538966 TNXBP22105 4242 aa5.06□□□□□ -1.6
PLXNB3-209ENST00000538966 KRTAP19-8Q3LI54 63 aa5.05□□□□□ -1.6
PLXNB3-209ENST00000538966 LCE2BO14633 110 aa5.05□□□□□ -1.6
PLXNB3-209ENST00000538966 KRTAP12-4P60329 112 aa5.04□□□□□ -1.6
PLXNB3-209ENST00000538966 PKHD1L1Q86WI1 4243 aa5.03□□□□□ -1.6
PLXNB3-209ENST00000538966 MT1GP13640 62 aa5.03□□□□□ -1.6
PLXNB3-209ENST00000538966 RYR2Q92736 4967 aa5.02□□□□□ -1.61
PLXNB3-209ENST00000538966 KRTAP19-1Q8IUB9 90 aa5.01□□□□□ -1.61
PLXNB3-209ENST00000538966 HERC1Q15751 4861 aa4.99□□□□□ -1.61
PLXNB3-209ENST00000538966 MT1XP80297 61 aa4.98□□□□□ -1.61
PLXNB3-209ENST00000538966 KRTAP4-8A0A0G2JLE6 195 aa4.9□□□□□ -1.63
PLXNB3-209ENST00000538966 KRTAP4-8Q9BYQ9 185 aa4.9□□□□□ -1.63
PLXNB3-209ENST00000538966 KRTAP9-8Q9BYQ0 159 aa4.88□□□□□ -1.63
PLXNB3-209ENST00000538966 MT1BP07438 61 aa4.87□□□□□ -1.63
PLXNB3-209ENST00000538966 LCE2CQ5TA81 110 aa4.82□□□□□ -1.64
PLXNB3-209ENST00000538966 LRP2P98164 4655 aa4.79□□□□□ -1.64
PLXNB3-209ENST00000538966 KRTAP9-3Q9BYQ3 159 aa4.78□□□□□ -1.64
PLXNB3-209ENST00000538966 KIAA1109Q2LD37 5005 aa4.78□□□□□ -1.64
PLXNB3-209ENST00000538966 BIRC6Q9NR09 4857 aa4.76□□□□□ -1.65
PLXNB3-209ENST00000538966 LCE3DQ9BYE3 92 aa4.76□□□□□ -1.65
PLXNB3-209ENST00000538966 LCE2DQ5TA82 110 aaPredicted RBP4.75□□□□□ -1.65
PLXNB3-209ENST00000538966 SPRR5A0A1B0GTR4 108 aa4.74□□□□□ -1.65
PLXNB3-209ENST00000538966 KMT2CQ8NEZ4 4911 aaKnown RBP4.7□□□□□ -1.66
PLXNB3-209ENST00000538966 KRTAP4-7Q9BYR0 210 aa4.7□□□□□ -1.66
PLXNB3-209ENST00000538966 MT4P47944 62 aa4.69□□□□□ -1.66
PLXNB3-209ENST00000538966 LCE3EQ5T5B0 92 aa4.67□□□□□ -1.66
PLXNB3-209ENST00000538966 MUC17Q685J3 4493 aa4.65□□□□□ -1.66
PLXNB3-209ENST00000538966 HERC2O95714 4834 aa4.64□□□□□ -1.67
PLXNB3-209ENST00000538966 KRTAP19-2Q3LHN2 52 aa4.59□□□□□ -1.67
PLXNB3-209ENST00000538966 KRTAP19-3Q7Z4W3 81 aa4.55□□□□□ -1.68
PLXNB3-209ENST00000538966 FLGP20930 4061 aaPredicted RBP4.54□□□□□ -1.68
PLXNB3-209ENST00000538966 MT1LQ93083 61 aa4.54□□□□□ -1.68
PLXNB3-209ENST00000538966 MT1EP04732 61 aa4.48□□□□□ -1.69
PLXNB3-209ENST00000538966 PCLOQ9Y6V0 5065 aa4.47□□□□□ -1.69
PLXNB3-209ENST00000538966 LCE1BQ5T7P3 118 aa4.46□□□□□ -1.7
PLXNB3-209ENST00000538966 KRTAP9-2Q9BYQ4 174 aa4.46□□□□□ -1.7
PLXNB3-209ENST00000538966 LOC100996750A0A140TA64 210 aa4.46□□□□□ -1.7
PLXNB3-209ENST00000538966 PRM1P04553 51 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 397.4 ms