RNA–Protein interactions for RNA: ENST00000538966.5

PLXNB3-209, Transcript of plexin B3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PLXNB3, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-209ENST00000538966 DCAF8L2P0C7V8 631 aa24.37■■□□□ 1.49
PLXNB3-209ENST00000538966 NISCHQ9Y2I1 1504 aa23.32■■□□□ 1.32
PLXNB3-209ENST00000538966 SUPT5HO00267 1087 aaKnown RBP23.27■■□□□ 1.32
PLXNB3-209ENST00000538966 EHMT2Q96KQ7 1210 aa22.94■■□□□ 1.26
PLXNB3-209ENST00000538966 SHROOM4Q9ULL8 1493 aa22.75■■□□□ 1.23
PLXNB3-209ENST00000538966 PELP1Q8IZL8 1130 aaKnown RBP22.56■■□□□ 1.2
PLXNB3-209ENST00000538966 TTBK1Q5TCY1 1321 aaPredicted RBP22.19■■□□□ 1.14
PLXNB3-209ENST00000538966 APLP2Q06481 763 aa22.17■■□□□ 1.14
PLXNB3-209ENST00000538966 FAM9AQ8IZU1 332 aaPredicted RBP22.08■■□□□ 1.12
PLXNB3-209ENST00000538966 PCGF6Q9BYE7 350 aa22.02■■□□□ 1.12
PLXNB3-209ENST00000538966 ERICH6Q7L0X2 663 aa21.86■■□□□ 1.09
PLXNB3-209ENST00000538966 RANGAP1P46060 587 aaPredicted RBP21.78■■□□□ 1.08
PLXNB3-209ENST00000538966 CENPBP07199 599 aaPredicted RBP21.71■■□□□ 1.07
PLXNB3-209ENST00000538966 CCER1Q8TC90 406 aaPredicted RBP21.61■■□□□ 1.05
PLXNB3-209ENST00000538966 ATP1B4Q9UN42 357 aaPredicted RBP21.51■■□□□ 1.03
PLXNB3-209ENST00000538966 YTHDC1Q96MU7 727 aaKnown RBP21.5■■□□□ 1.03
PLXNB3-209ENST00000538966 ZEB1P37275 1124 aaPredicted RBP21.47■■□□□ 1.03
PLXNB3-209ENST00000538966 TRIM41Q8WV44 630 aa21.38■■□□□ 1.01
PLXNB3-209ENST00000538966 NEFLP07196 543 aa21.3■■□□□ 1
PLXNB3-209ENST00000538966 UBTFP17480 764 aaKnown RBP21.25■□□□□ 0.99
PLXNB3-209ENST00000538966 PPARGC1BQ86YN6 1023 aaKnown RBP21.24■□□□□ 0.99
PLXNB3-209ENST00000538966 MYT1Q01538 1121 aa21.08■□□□□ 0.96
PLXNB3-209ENST00000538966 POLR3GLQ9BT43 218 aa20.85■□□□□ 0.93
PLXNB3-209ENST00000538966 ITGAEP38570 1179 aa20.82■□□□□ 0.92
PLXNB3-209ENST00000538966 TRIM26Q12899 539 aaPredicted RBP20.82■□□□□ 0.92
PLXNB3-209ENST00000538966 DAXXQ9UER7 740 aaPredicted RBP20.79■□□□□ 0.92
PLXNB3-209ENST00000538966 CNGB1Q14028 1251 aaPredicted RBP20.77■□□□□ 0.92
PLXNB3-209ENST00000538966 HRCP23327 699 aa20.77■□□□□ 0.91
PLXNB3-209ENST00000538966 MYT1LQ9UL68 1186 aa20.66■□□□□ 0.9
PLXNB3-209ENST00000538966 HNRNPUL2Q1KMD3 747 aaKnown RBP20.62■□□□□ 0.89
PLXNB3-209ENST00000538966 LOC105371045A0A1W2PR82 267 aa20.61■□□□□ 0.89
PLXNB3-209ENST00000538966 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.59■□□□□ 0.89
PLXNB3-209ENST00000538966 CHIC1Q5VXU3 224 aa20.51■□□□□ 0.87
PLXNB3-209ENST00000538966 SLC4A1APQ9BWU0 796 aaKnown RBP20.4■□□□□ 0.86
PLXNB3-209ENST00000538966 ZNF316A6NFI3 1004 aaPredicted RBP20.34■□□□□ 0.85
PLXNB3-209ENST00000538966 RTL5Q5HYW3 569 aaPredicted RBP20.33■□□□□ 0.84
PLXNB3-209ENST00000538966 DIEXFQ68CQ4 756 aaKnown RBP20.33■□□□□ 0.84
PLXNB3-209ENST00000538966 CLSPNQ9HAW4 1339 aa20.31■□□□□ 0.84
PLXNB3-209ENST00000538966 BCANQ96GW7 911 aa20.24■□□□□ 0.83
PLXNB3-209ENST00000538966 FAM50AQ14320 339 aaKnown RBP20.14■□□□□ 0.81
PLXNB3-209ENST00000538966 NEUROD1Q13562 356 aa20.11■□□□□ 0.81
PLXNB3-209ENST00000538966 GTF3C3Q9Y5Q9 886 aa20.08■□□□□ 0.8
PLXNB3-209ENST00000538966 TRIM52Q96A61 297 aa20.07■□□□□ 0.8
PLXNB3-209ENST00000538966 ABCC9O60706 1549 aa20.04■□□□□ 0.8
PLXNB3-209ENST00000538966 ZNF326Q5BKZ1 582 aaKnown RBP19.95■□□□□ 0.78
PLXNB3-209ENST00000538966 BCL11AQ9H165 835 aa19.92■□□□□ 0.78
PLXNB3-209ENST00000538966 CDK11AQ9UQ88 783 aaPredicted RBP19.91■□□□□ 0.78
PLXNB3-209ENST00000538966 ANP32CO43423 234 aa19.89■□□□□ 0.77
PLXNB3-209ENST00000538966 PABPN1Q86U42 306 aaKnown RBP eCLIP19.79■□□□□ 0.76
PLXNB3-209ENST00000538966 ZBTB47Q9UFB7 747 aaPredicted RBP19.78■□□□□ 0.76
PLXNB3-209ENST00000538966 SLC24A1O60721 1099 aa19.75■□□□□ 0.75
PLXNB3-209ENST00000538966 CANXP27824 592 aaKnown RBP19.74■□□□□ 0.75
PLXNB3-209ENST00000538966 NPM2Q86SE8 214 aaKnown RBP19.67■□□□□ 0.74
PLXNB3-209ENST00000538966 ACIN1Q9UKV3 1341 aaKnown RBP19.63■□□□□ 0.73
PLXNB3-209ENST00000538966 ARID3CA6NKF2 412 aa19.59■□□□□ 0.73
PLXNB3-209ENST00000538966 ANP32AP39687 249 aaKnown RBP19.59■□□□□ 0.73
PLXNB3-209ENST00000538966 FBLN2P98095 1184 aa19.56■□□□□ 0.72
PLXNB3-209ENST00000538966 P3H3Q8IVL6 736 aa19.55■□□□□ 0.72
PLXNB3-209ENST00000538966 EIF5BO60841 1220 aaKnown RBP19.48■□□□□ 0.71
PLXNB3-209ENST00000538966 FKBP8Q14318 412 aa19.48■□□□□ 0.71
PLXNB3-209ENST00000538966 PLPPR3Q6T4P5 718 aa19.47■□□□□ 0.71
PLXNB3-209ENST00000538966 NEFMP07197 916 aa19.47■□□□□ 0.71
PLXNB3-209ENST00000538966 ZNF777Q9ULD5 760 aaPredicted RBP19.41■□□□□ 0.7
PLXNB3-209ENST00000538966 SCRIBQ14160 1630 aa19.38■□□□□ 0.69
PLXNB3-209ENST00000538966 CCDC180Q9P1Z9 1646 aa19.38■□□□□ 0.69
PLXNB3-209ENST00000538966 ZCCHC6Q5VYS8 1495 aaKnown RBP19.34■□□□□ 0.69
PLXNB3-209ENST00000538966 SALL2Q9Y467 1007 aaPredicted RBP19.33■□□□□ 0.69
PLXNB3-209ENST00000538966 HSP90AA1P07900 732 aaKnown RBP19.32■□□□□ 0.68
PLXNB3-209ENST00000538966 FAM9BQ8IZU0 186 aa19.32■□□□□ 0.68
PLXNB3-209ENST00000538966 HNRNPUQ00839 825 aaKnown RBP eCLIP19.31■□□□□ 0.68
PLXNB3-209ENST00000538966 ANP32BQ92688 251 aaKnown RBP19.29■□□□□ 0.68
PLXNB3-209ENST00000538966 NBR1Q14596 966 aa19.29■□□□□ 0.68
PLXNB3-209ENST00000538966 DDX10Q13206 875 aaKnown RBP19.27■□□□□ 0.67
PLXNB3-209ENST00000538966 ARXQ96QS3 562 aa19.26■□□□□ 0.67
PLXNB3-209ENST00000538966 CSRNP3Q8WYN3 585 aa19.23■□□□□ 0.67
PLXNB3-209ENST00000538966 CHGAP10645 457 aaKnown RBP19.21■□□□□ 0.67
PLXNB3-209ENST00000538966 TONSLQ96HA7 1378 aa19.2■□□□□ 0.66
PLXNB3-209ENST00000538966 UPF2Q9HAU5 1272 aaKnown RBP19.19■□□□□ 0.66
PLXNB3-209ENST00000538966 IRX6P78412 446 aaPredicted RBP19.14■□□□□ 0.65
PLXNB3-209ENST00000538966 CCDC136Q96JN2 1154 aa19.13■□□□□ 0.65
PLXNB3-209ENST00000538966 STAG3Q9UJ98 1225 aa19.08■□□□□ 0.64
PLXNB3-209ENST00000538966 CHIC2Q9UKJ5 165 aa19.07■□□□□ 0.64
PLXNB3-209ENST00000538966 TMC1Q8TDI8 760 aa19.06■□□□□ 0.64
PLXNB3-209ENST00000538966 ESF1Q9H501 851 aaKnown RBP19.05■□□□□ 0.64
PLXNB3-209ENST00000538966 HIRIP3Q9BW71 556 aaPredicted RBP19.03■□□□□ 0.64
PLXNB3-209ENST00000538966 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.02■□□□□ 0.64
PLXNB3-209ENST00000538966 SCAF1Q9H7N4 1312 aaKnown RBP19.02■□□□□ 0.63
PLXNB3-209ENST00000538966 GLIPR1L2Q4G1C9 344 aa19.01■□□□□ 0.63
PLXNB3-209ENST00000538966 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.99■□□□□ 0.63
PLXNB3-209ENST00000538966 MRS2Q9HD23 443 aa18.99■□□□□ 0.63
PLXNB3-209ENST00000538966 KDM2AQ9Y2K7 1162 aa18.99■□□□□ 0.63
PLXNB3-209ENST00000538966 WDR43Q15061 677 aaKnown RBP eCLIP18.98■□□□□ 0.63
PLXNB3-209ENST00000538966 MIER1Q8N108 512 aa18.98■□□□□ 0.63
PLXNB3-209ENST00000538966 RB1CC1Q8TDY2 1594 aa18.98■□□□□ 0.63
PLXNB3-209ENST00000538966 A0A0G2JS52 829 aa18.96■□□□□ 0.63
PLXNB3-209ENST00000538966 SENP3Q9H4L4 574 aaPredicted RBP18.91■□□□□ 0.62
PLXNB3-209ENST00000538966 SENP3-EIF4A1A0A087X0R7 540 aa18.9■□□□□ 0.62
PLXNB3-209ENST00000538966 DCAF1Q9Y4B6 1507 aa18.86■□□□□ 0.61
PLXNB3-209ENST00000538966 PLEKHG5O94827 1062 aa18.83■□□□□ 0.61
PLXNB3-209ENST00000538966 MYH16Q9H6N6 1097 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 194.4 ms