RNA–Protein interactions for RNA: ENST00000529993.5

LRP5-206, Transcript of LDL receptor related protein 5, humanhuman

TSL 1 (best)

Gene LRP5, Length 5,103 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP5-206ENST00000529993 DNAH1Q9P2D7 4330 aa6.98□□□□□ -1.29
LRP5-206ENST00000529993 PRO2289Q9P1D8 64 aa6.97□□□□□ -1.29
LRP5-206ENST00000529993 DNHD1Q96M86 4753 aa6.97□□□□□ -1.29
LRP5-206ENST00000529993 STARD9Q9P2P6 4700 aa6.79□□□□□ -1.32
LRP5-206ENST00000529993 VPS13DQ5THJ4 4388 aa6.79□□□□□ -1.32
LRP5-206ENST00000529993 FAT1Q14517 4588 aa6.77□□□□□ -1.33
LRP5-206ENST00000529993 ALMS1Q8TCU4 4167 aa6.77□□□□□ -1.33
LRP5-206ENST00000529993 DNAH17Q9UFH2 4485 aa6.75□□□□□ -1.33
LRP5-206ENST00000529993 DYNC1H1Q14204 4646 aaKnown RBP6.69□□□□□ -1.34
LRP5-206ENST00000529993 LORP23490 312 aaPredicted RBP6.68□□□□□ -1.34
LRP5-206ENST00000529993 LRP1BQ9NZR2 4599 aa6.67□□□□□ -1.34
LRP5-206ENST00000529993 DNAH8Q96JB1 4490 aa6.67□□□□□ -1.34
LRP5-206ENST00000529993 PRKDCP78527 4128 aaKnown RBP6.65□□□□□ -1.34
LRP5-206ENST00000529993 KRTAP15-1Q3LI76 137 aa6.63□□□□□ -1.35
LRP5-206ENST00000529993 DNAH2Q9P225 4427 aa6.63□□□□□ -1.35
LRP5-206ENST00000529993 KMT2AQ03164 3969 aa6.58□□□□□ -1.36
LRP5-206ENST00000529993 RYR1P21817 5038 aa6.54□□□□□ -1.36
LRP5-206ENST00000529993 ANK2Q01484 3957 aa6.53□□□□□ -1.36
LRP5-206ENST00000529993 LYSTQ99698 3801 aa6.51□□□□□ -1.37
LRP5-206ENST00000529993 DNAH3Q8TD57 4116 aa6.5□□□□□ -1.37
LRP5-206ENST00000529993 KRTAP4-1Q9BYQ7 146 aa6.48□□□□□ -1.37
LRP5-206ENST00000529993 SACSQ9NZJ4 4579 aa6.47□□□□□ -1.37
LRP5-206ENST00000529993 MYCBP2O75592 4640 aa6.46□□□□□ -1.37
LRP5-206ENST00000529993 DYNC2H1Q8NCM8 4307 aaKnown RBP6.43□□□□□ -1.38
LRP5-206ENST00000529993 KRTAP10-12P60413 245 aa6.43□□□□□ -1.38
LRP5-206ENST00000529993 VPS13BQ7Z7G8 4022 aa6.4□□□□□ -1.38
LRP5-206ENST00000529993 FAT2Q9NYQ8 4349 aa6.4□□□□□ -1.39
LRP5-206ENST00000529993 KIAA1109Q2LD37 5005 aa6.37□□□□□ -1.39
LRP5-206ENST00000529993 APOBP04114 4563 aaKnown RBP6.36□□□□□ -1.39
LRP5-206ENST00000529993 LCE3AQ5TA76 89 aa6.35□□□□□ -1.39
LRP5-206ENST00000529993 FRAS1Q86XX4 4008 aa6.34□□□□□ -1.39
LRP5-206ENST00000529993 KRTAP12-3P60328 96 aa6.3□□□□□ -1.4
LRP5-206ENST00000529993 CMYA5Q8N3K9 4069 aa6.29□□□□□ -1.4
LRP5-206ENST00000529993 DNAH6Q9C0G6 4158 aa6.28□□□□□ -1.4
LRP5-206ENST00000529993 LRP1Q07954 4544 aaKnown RBP6.27□□□□□ -1.41
LRP5-206ENST00000529993 RYR3Q15413 4870 aa6.24□□□□□ -1.41
LRP5-206ENST00000529993 DNAH7Q8WXX0 4024 aa6.23□□□□□ -1.41
LRP5-206ENST00000529993 FAT3Q8TDW7 4589 aa6.23□□□□□ -1.41
LRP5-206ENST00000529993 KRTAP17-1Q9BYP8 105 aa6.23□□□□□ -1.41
LRP5-206ENST00000529993 KRTAP23-1A1A580 65 aa6.2□□□□□ -1.42
LRP5-206ENST00000529993 HECTD4Q9Y4D8 3996 aa6.19□□□□□ -1.42
LRP5-206ENST00000529993 CRCT1Q9UGL9 99 aa6.17□□□□□ -1.42
LRP5-206ENST00000529993 INE1O15225 51 aa6.13□□□□□ -1.43
LRP5-206ENST00000529993 MT1HP80294 61 aa6.13□□□□□ -1.43
LRP5-206ENST00000529993 HYDINQ4G0P3 5121 aa6.1□□□□□ -1.43
LRP5-206ENST00000529993 MT2AP02795 61 aa6.08□□□□□ -1.44
LRP5-206ENST00000529993 SPRR2GQ9BYE4 73 aa6.02□□□□□ -1.45
LRP5-206ENST00000529993 MT1FP04733 61 aa6.01□□□□□ -1.45
LRP5-206ENST00000529993 PKHD1P08F94 4074 aa6□□□□□ -1.45
LRP5-206ENST00000529993 RYR2Q92736 4967 aa5.99□□□□□ -1.45
LRP5-206ENST00000529993 LRP2P98164 4655 aa5.99□□□□□ -1.45
LRP5-206ENST00000529993 HERC2O95714 4834 aa5.9□□□□□ -1.47
LRP5-206ENST00000529993 KRTAP8-1Q8IUC2 63 aa5.84□□□□□ -1.48
LRP5-206ENST00000529993 HSPG2P98160 4391 aa5.83□□□□□ -1.48
LRP5-206ENST00000529993 KRTAP19-1Q8IUB9 90 aa5.8□□□□□ -1.48
LRP5-206ENST00000529993 KMT2CQ8NEZ4 4911 aaKnown RBP5.76□□□□□ -1.49
LRP5-206ENST00000529993 PKD1P98161 4303 aa5.76□□□□□ -1.49
LRP5-206ENST00000529993 LPAP08519 4548 aa5.74□□□□□ -1.49
LRP5-206ENST00000529993 KRTAP19-5Q3LI72 72 aa5.73□□□□□ -1.49
LRP5-206ENST00000529993 KRTAP10-5P60370 271 aa5.7□□□□□ -1.5
LRP5-206ENST00000529993 KRTAP10-7P60409 375 aaPredicted RBP5.65□□□□□ -1.5
LRP5-206ENST00000529993 KRTAP19-8Q3LI54 63 aa5.62□□□□□ -1.51
LRP5-206ENST00000529993 PCLOQ9Y6V0 5065 aa5.6□□□□□ -1.51
LRP5-206ENST00000529993 LCE2CQ5TA81 110 aa5.59□□□□□ -1.52
LRP5-206ENST00000529993 BIRC6Q9NR09 4857 aa5.58□□□□□ -1.52
LRP5-206ENST00000529993 LCE3CQ5T5A8 94 aa5.58□□□□□ -1.52
LRP5-206ENST00000529993 MT1XP80297 61 aa5.57□□□□□ -1.52
LRP5-206ENST00000529993 KRTAP9-8Q9BYQ0 159 aa5.57□□□□□ -1.52
LRP5-206ENST00000529993 MT1BP07438 61 aa5.55□□□□□ -1.52
LRP5-206ENST00000529993 HERC1Q15751 4861 aa5.55□□□□□ -1.52
LRP5-206ENST00000529993 TNXBP22105 4242 aa5.51□□□□□ -1.53
LRP5-206ENST00000529993 EPPK1P58107 5090 aaKnown RBP5.48□□□□□ -1.53
LRP5-206ENST00000529993 SPRR2FQ96RM1 72 aa5.48□□□□□ -1.53
LRP5-206ENST00000529993 PKHD1L1Q86WI1 4243 aa5.47□□□□□ -1.53
LRP5-206ENST00000529993 ABCA13Q86UQ4 5058 aa5.45□□□□□ -1.54
LRP5-206ENST00000529993 KRTAP19-2Q3LHN2 52 aa5.44□□□□□ -1.54
LRP5-206ENST00000529993 KRTAP4-8A0A0G2JLE6 195 aa5.4□□□□□ -1.54
LRP5-206ENST00000529993 KRTAP4-8Q9BYQ9 185 aa5.4□□□□□ -1.54
LRP5-206ENST00000529993 MUC17Q685J3 4493 aa5.4□□□□□ -1.55
LRP5-206ENST00000529993 KRTAP9-3Q9BYQ3 159 aa5.39□□□□□ -1.55
LRP5-206ENST00000529993 KRTAP19-4Q3LI73 84 aa5.35□□□□□ -1.55
LRP5-206ENST00000529993 SPRR5A0A1B0GTR4 108 aa5.31□□□□□ -1.56
LRP5-206ENST00000529993 FLGP20930 4061 aaPredicted RBP5.29□□□□□ -1.56
LRP5-206ENST00000529993 UBR4Q5T4S7 5183 aa5.21□□□□□ -1.58
LRP5-206ENST00000529993 LCE2BO14633 110 aa5.2□□□□□ -1.58
LRP5-206ENST00000529993 MT1GP13640 62 aa5.19□□□□□ -1.58
LRP5-206ENST00000529993 FSIP2Q5CZC0 6907 aa5.17□□□□□ -1.58
LRP5-206ENST00000529993 FAT4Q6V0I7 4981 aa5.15□□□□□ -1.59
LRP5-206ENST00000529993 KRTAP4-7Q9BYR0 210 aa5.13□□□□□ -1.59
LRP5-206ENST00000529993 RNF213Q63HN8 5207 aa5.13□□□□□ -1.59
LRP5-206ENST00000529993 MUC2Q02817 5179 aa5.13□□□□□ -1.59
LRP5-206ENST00000529993 LCE3BQ5TA77 95 aa5.11□□□□□ -1.59
LRP5-206ENST00000529993 HMCN2Q8NDA2 5059 aa5.07□□□□□ -1.6
LRP5-206ENST00000529993 SPRR2EP22531 72 aa5.03□□□□□ -1.6
LRP5-206ENST00000529993 SPRR2BP35325 72 aa5.03□□□□□ -1.6
LRP5-206ENST00000529993 SPRR2AP35326 72 aa5.03□□□□□ -1.6
LRP5-206ENST00000529993 KRTAP12-4P60329 112 aa5□□□□□ -1.61
LRP5-206ENST00000529993 MT1LQ93083 61 aa4.98□□□□□ -1.61
LRP5-206ENST00000529993 SYNE1Q8NF91 8797 aaKnown RBP4.98□□□□□ -1.61
LRP5-206ENST00000529993 MT1EP04732 61 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms