RNA–Protein interactions for RNA: ENST00000529521.1

FDFT1-216, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 418 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-216ENST00000529521 COX6B2Q6YFQ2 88 aa1.42□□□□□ -2.18
FDFT1-216ENST00000529521 Q6ZSA8 131 aa1.41□□□□□ -2.18
FDFT1-216ENST00000529521 BIRC6Q9NR09 4857 aa1.41□□□□□ -2.18
FDFT1-216ENST00000529521 CUBNO60494 3623 aa1.41□□□□□ -2.18
FDFT1-216ENST00000529521 PP632Q6XCG6 107 aa1.4□□□□□ -2.19
FDFT1-216ENST00000529521 KRTAP5-5Q701N2 237 aaPredicted RBP1.4□□□□□ -2.19
FDFT1-216ENST00000529521 KRTAP13-1Q8IUC0 172 aa1.4□□□□□ -2.19
FDFT1-216ENST00000529521 C10orf95Q9H7T3 257 aa1.4□□□□□ -2.19
FDFT1-216ENST00000529521 VWFP04275 2813 aa1.39□□□□□ -2.19
FDFT1-216ENST00000529521 TENM1Q9UKZ4 2725 aa1.39□□□□□ -2.19
FDFT1-216ENST00000529521 AKAP9Q99996 3911 aa1.39□□□□□ -2.19
FDFT1-216ENST00000529521 A0A096LNI7 61 aa1.39□□□□□ -2.19
FDFT1-216ENST00000529521 RPL37P61927 97 aaKnown RBP1.39□□□□□ -2.19
FDFT1-216ENST00000529521 KRTAP13-3Q3SY46 172 aa1.39□□□□□ -2.19
FDFT1-216ENST00000529521 H1FX-AS1Q4G0G2 97 aa1.39□□□□□ -2.19
FDFT1-216ENST00000529521 UBE2DNLQ8IWF7 75 aa1.39□□□□□ -2.19
FDFT1-216ENST00000529521 RYR3Q15413 4870 aa1.39□□□□□ -2.19
FDFT1-216ENST00000529521 BSNQ9UPA5 3926 aa1.38□□□□□ -2.19
FDFT1-216ENST00000529521 APLNQ9ULZ1 77 aa1.38□□□□□ -2.19
FDFT1-216ENST00000529521 KMT2CQ8NEZ4 4911 aaKnown RBP1.38□□□□□ -2.19
FDFT1-216ENST00000529521 PCLOQ9Y6V0 5065 aa1.38□□□□□ -2.19
FDFT1-216ENST00000529521 PRLHP81277 87 aa1.37□□□□□ -2.19
FDFT1-216ENST00000529521 KRTAP13-2Q52LG2 175 aa1.37□□□□□ -2.19
FDFT1-216ENST00000529521 RPS29P62273 56 aaKnown RBP1.36□□□□□ -2.19
FDFT1-216ENST00000529521 UBR4Q5T4S7 5183 aa1.36□□□□□ -2.19
FDFT1-216ENST00000529521 TENM3Q9P273 2699 aa1.36□□□□□ -2.19
FDFT1-216ENST00000529521 SPINK1P00995 79 aa1.35□□□□□ -2.19
FDFT1-216ENST00000529521 LCE3EQ5T5B0 92 aa1.35□□□□□ -2.19
FDFT1-216ENST00000529521 EPPK1P58107 5090 aaKnown RBP1.35□□□□□ -2.19
FDFT1-216ENST00000529521 ZNF469Q96JG9 3925 aaPredicted RBP1.34□□□□□ -2.19
FDFT1-216ENST00000529521 ALMS1Q8TCU4 4167 aa1.34□□□□□ -2.19
FDFT1-216ENST00000529521 K7EIL1 84 aa1.34□□□□□ -2.19
FDFT1-216ENST00000529521 LCE1CQ5T751 118 aa1.34□□□□□ -2.19
FDFT1-216ENST00000529521 LCE1BQ5T7P3 118 aa1.34□□□□□ -2.19
FDFT1-216ENST00000529521 HYDINQ4G0P3 5121 aa1.34□□□□□ -2.2
FDFT1-216ENST00000529521 ANK2Q01484 3957 aa1.33□□□□□ -2.2
FDFT1-216ENST00000529521 SVEP1Q4LDE5 3571 aa1.33□□□□□ -2.2
FDFT1-216ENST00000529521 VPS13CQ709C8 3753 aa1.33□□□□□ -2.2
FDFT1-216ENST00000529521 TENM2Q9NT68 2774 aa1.32□□□□□ -2.2
FDFT1-216ENST00000529521 SPRR5A0A1B0GTR4 108 aa1.32□□□□□ -2.2
FDFT1-216ENST00000529521 KRTAP10-1P60331 282 aa1.32□□□□□ -2.2
FDFT1-216ENST00000529521 SRRM2Q9UQ35 2752 aaKnown RBP1.31□□□□□ -2.2
FDFT1-216ENST00000529521 SPINK6Q6UWN8 80 aa1.31□□□□□ -2.2
FDFT1-216ENST00000529521 STAB2Q8WWQ8 2551 aa1.3□□□□□ -2.2
FDFT1-216ENST00000529521 PRKDCP78527 4128 aaKnown RBP1.29□□□□□ -2.2
FDFT1-216ENST00000529521 RYR2Q92736 4967 aa1.29□□□□□ -2.2
FDFT1-216ENST00000529521 HERC2O95714 4834 aa1.28□□□□□ -2.2
FDFT1-216ENST00000529521 MUC19Q7Z5P9 8384 aa1.28□□□□□ -2.2
FDFT1-216ENST00000529521 KRTAP1-4P0C5Y4 121 aa1.28□□□□□ -2.2
FDFT1-216ENST00000529521 RYR1P21817 5038 aa1.28□□□□□ -2.2
FDFT1-216ENST00000529521 S4R3F8 94 aa1.27□□□□□ -2.21
FDFT1-216ENST00000529521 DMBT1Q9UGM3 2413 aaPredicted RBP1.27□□□□□ -2.21
FDFT1-216ENST00000529521 FLG2Q5D862 2391 aaPredicted RBP1.27□□□□□ -2.21
FDFT1-216ENST00000529521 TRRAPQ9Y4A5 3859 aa1.26□□□□□ -2.21
FDFT1-216ENST00000529521 COL7A1Q02388 2944 aa1.26□□□□□ -2.21
FDFT1-216ENST00000529521 KRTAP13-4Q3LI77 160 aa1.25□□□□□ -2.21
FDFT1-216ENST00000529521 Q5VSD8 79 aa1.24□□□□□ -2.21
FDFT1-216ENST00000529521 KIAA1109Q2LD37 5005 aa1.24□□□□□ -2.21
FDFT1-216ENST00000529521 HMCN1Q96RW7 5635 aa1.24□□□□□ -2.21
FDFT1-216ENST00000529521 M0QZ58 72 aa1.23□□□□□ -2.21
FDFT1-216ENST00000529521 CRCT1Q9UGL9 99 aa1.23□□□□□ -2.21
FDFT1-216ENST00000529521 ANK3Q12955 4377 aaKnown RBP1.2□□□□□ -2.22
FDFT1-216ENST00000529521 A0A0D9SG42 100 aa1.2□□□□□ -2.22
FDFT1-216ENST00000529521 KRTAP12-1P59990 96 aa1.19□□□□□ -2.22
FDFT1-216ENST00000529521 HERC1Q15751 4861 aa1.19□□□□□ -2.22
FDFT1-216ENST00000529521 DNAH1Q9P2D7 4330 aa1.19□□□□□ -2.22
FDFT1-216ENST00000529521 ABCA13Q86UQ4 5058 aa1.18□□□□□ -2.22
FDFT1-216ENST00000529521 DYNC2H1Q8NCM8 4307 aaKnown RBP1.18□□□□□ -2.22
FDFT1-216ENST00000529521 MUC2Q02817 5179 aa1.16□□□□□ -2.22
FDFT1-216ENST00000529521 SACSQ9NZJ4 4579 aa1.15□□□□□ -2.23
FDFT1-216ENST00000529521 C9orf92A6NGG3 77 aa1.15□□□□□ -2.23
FDFT1-216ENST00000529521 KRTAP10-4P60372 401 aaPredicted RBP1.15□□□□□ -2.23
FDFT1-216ENST00000529521 DNAH3Q8TD57 4116 aa1.14□□□□□ -2.23
FDFT1-216ENST00000529521 KRTAP10-10P60014 251 aa1.14□□□□□ -2.23
FDFT1-216ENST00000529521 CMYA5Q8N3K9 4069 aa1.14□□□□□ -2.23
FDFT1-216ENST00000529521 CSMD3Q7Z407 3707 aa1.12□□□□□ -2.23
FDFT1-216ENST00000529521 FRAS1Q86XX4 4008 aa1.12□□□□□ -2.23
FDFT1-216ENST00000529521 SMR3BP02814 79 aaPredicted RBP1.11□□□□□ -2.23
FDFT1-216ENST00000529521 LYSTQ99698 3801 aa1.11□□□□□ -2.23
FDFT1-216ENST00000529521 HECTD4Q9Y4D8 3996 aa1.1□□□□□ -2.23
FDFT1-216ENST00000529521 KRTAP5-7Q6L8G8 165 aa1.1□□□□□ -2.23
FDFT1-216ENST00000529521 FSIP2Q5CZC0 6907 aa1.1□□□□□ -2.23
FDFT1-216ENST00000529521 KRTAP6-3Q3LI67 103 aa1.09□□□□□ -2.23
FDFT1-216ENST00000529521 HUWE1Q7Z6Z7 4374 aaKnown RBP1.09□□□□□ -2.24
FDFT1-216ENST00000529521 VPS13DQ5THJ4 4388 aa1.08□□□□□ -2.24
FDFT1-216ENST00000529521 DNAH9Q9NYC9 4486 aa1.07□□□□□ -2.24
FDFT1-216ENST00000529521 RNF213Q63HN8 5207 aa1.07□□□□□ -2.24
FDFT1-216ENST00000529521 TNP1P09430 55 aa1.07□□□□□ -2.24
FDFT1-216ENST00000529521 KRTAP12-4P60329 112 aa1.07□□□□□ -2.24
FDFT1-216ENST00000529521 KRTAP20-1Q3LI63 56 aa1.07□□□□□ -2.24
FDFT1-216ENST00000529521 FAT4Q6V0I7 4981 aa1.07□□□□□ -2.24
FDFT1-216ENST00000529521 MT1HL1P0DM35 61 aa1.06□□□□□ -2.24
FDFT1-216ENST00000529521 HMCN2Q8NDA2 5059 aa1.06□□□□□ -2.24
FDFT1-216ENST00000529521 HSPG2P98160 4391 aa1.05□□□□□ -2.24
FDFT1-216ENST00000529521 PKHD1P08F94 4074 aa1.05□□□□□ -2.24
FDFT1-216ENST00000529521 STARD9Q9P2P6 4700 aa1.05□□□□□ -2.24
FDFT1-216ENST00000529521 DNAH10Q8IVF4 4471 aa1.05□□□□□ -2.24
FDFT1-216ENST00000529521 DNAH7Q8WXX0 4024 aa1.05□□□□□ -2.24
FDFT1-216ENST00000529521 KMT2AQ03164 3969 aa1.04□□□□□ -2.24
FDFT1-216ENST00000529521 DNAH2Q9P225 4427 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms