RNA–Protein interactions for RNA: ENST00000528065.1

NCAPD3-207, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 4

Gene NCAPD3, Length 557 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-207ENST00000528065 LRRK2Q5S007 2527 aa1.28□□□□□ -2.2
NCAPD3-207ENST00000528065 SRRM2Q9UQ35 2752 aaKnown RBP1.28□□□□□ -2.2
NCAPD3-207ENST00000528065 CACNA1AO00555 2505 aa1.28□□□□□ -2.2
NCAPD3-207ENST00000528065 CUBNO60494 3623 aa1.28□□□□□ -2.21
NCAPD3-207ENST00000528065 VWFP04275 2813 aa1.27□□□□□ -2.21
NCAPD3-207ENST00000528065 DYNC2H1Q8NCM8 4307 aaKnown RBP1.27□□□□□ -2.21
NCAPD3-207ENST00000528065 C9orf92A6NGG3 77 aa1.27□□□□□ -2.21
NCAPD3-207ENST00000528065 SMR3AQ99954 134 aa1.27□□□□□ -2.21
NCAPD3-207ENST00000528065 PTPN13Q12923 2485 aa1.26□□□□□ -2.21
NCAPD3-207ENST00000528065 NF1P21359 2839 aa1.26□□□□□ -2.21
NCAPD3-207ENST00000528065 USP9YO00507 2555 aaPredicted RBP1.26□□□□□ -2.21
NCAPD3-207ENST00000528065 USP9XQ93008 2570 aaPredicted RBP1.26□□□□□ -2.21
NCAPD3-207ENST00000528065 COL6A5A8TX70 2615 aa1.25□□□□□ -2.21
NCAPD3-207ENST00000528065 HELZ2Q9BYK8 2649 aaKnown RBP1.25□□□□□ -2.21
NCAPD3-207ENST00000528065 ACACBO00763 2458 aa1.25□□□□□ -2.21
NCAPD3-207ENST00000528065 APCP25054 2843 aa1.25□□□□□ -2.21
NCAPD3-207ENST00000528065 CFAP46Q8IYW2 2715 aa1.25□□□□□ -2.21
NCAPD3-207ENST00000528065 SETXQ7Z333 2677 aaKnown RBP1.25□□□□□ -2.21
NCAPD3-207ENST00000528065 MYO9AB2RTY4 2548 aa1.25□□□□□ -2.21
NCAPD3-207ENST00000528065 PDZD2O15018 2839 aa1.25□□□□□ -2.21
NCAPD3-207ENST00000528065 UTP20O75691 2785 aaKnown RBP1.25□□□□□ -2.21
NCAPD3-207ENST00000528065 TEX15Q9BXT5 2789 aa1.25□□□□□ -2.21
NCAPD3-207ENST00000528065 HUWE1Q7Z6Z7 4374 aaKnown RBP1.24□□□□□ -2.21
NCAPD3-207ENST00000528065 TLN2Q9Y4G6 2542 aa1.24□□□□□ -2.21
NCAPD3-207ENST00000528065 ZANQ9Y493 2812 aa1.24□□□□□ -2.21
NCAPD3-207ENST00000528065 CMYA5Q8N3K9 4069 aa1.24□□□□□ -2.21
NCAPD3-207ENST00000528065 ITPR3Q14573 2671 aa1.23□□□□□ -2.21
NCAPD3-207ENST00000528065 IGSF10Q6WRI0 2623 aa1.23□□□□□ -2.21
NCAPD3-207ENST00000528065 DNAH17Q9UFH2 4485 aa1.23□□□□□ -2.21
NCAPD3-207ENST00000528065 KRTAP21-2Q3LI59 83 aa1.23□□□□□ -2.21
NCAPD3-207ENST00000528065 DNAH10Q8IVF4 4471 aa1.23□□□□□ -2.21
NCAPD3-207ENST00000528065 NIPBLQ6KC79 2804 aaeCLIP1.23□□□□□ -2.21
NCAPD3-207ENST00000528065 TRRAPQ9Y4A5 3859 aa1.23□□□□□ -2.21
NCAPD3-207ENST00000528065 DNAH9Q9NYC9 4486 aa1.23□□□□□ -2.21
NCAPD3-207ENST00000528065 LYSTQ99698 3801 aa1.22□□□□□ -2.21
NCAPD3-207ENST00000528065 MEGF8Q7Z7M0 2845 aa1.22□□□□□ -2.21
NCAPD3-207ENST00000528065 PIEZO1Q92508 2521 aa1.22□□□□□ -2.21
NCAPD3-207ENST00000528065 USP24Q9UPU5 2620 aa1.22□□□□□ -2.21
NCAPD3-207ENST00000528065 PRKDCP78527 4128 aaKnown RBP1.22□□□□□ -2.21
NCAPD3-207ENST00000528065 MTORP42345 2549 aa1.22□□□□□ -2.21
NCAPD3-207ENST00000528065 FRAS1Q86XX4 4008 aa1.22□□□□□ -2.21
NCAPD3-207ENST00000528065 MYCBP2O75592 4640 aa1.22□□□□□ -2.21
NCAPD3-207ENST00000528065 PLECQ15149 4684 aaKnown RBP1.21□□□□□ -2.22
NCAPD3-207ENST00000528065 POLQO75417 2590 aa1.21□□□□□ -2.22
NCAPD3-207ENST00000528065 DNAH6Q9C0G6 4158 aa1.21□□□□□ -2.22
NCAPD3-207ENST00000528065 FLNCQ14315 2725 aa1.21□□□□□ -2.22
NCAPD3-207ENST00000528065 CHD8Q9HCK8 2581 aa1.21□□□□□ -2.22
NCAPD3-207ENST00000528065 DNAH8Q96JB1 4490 aa1.21□□□□□ -2.22
NCAPD3-207ENST00000528065 MYO18BQ8IUG5 2567 aa1.2□□□□□ -2.22
NCAPD3-207ENST00000528065 DNAH7Q8WXX0 4024 aa1.2□□□□□ -2.22
NCAPD3-207ENST00000528065 FLNAP21333 2647 aaKnown RBP1.2□□□□□ -2.22
NCAPD3-207ENST00000528065 DNAH2Q9P225 4427 aa1.2□□□□□ -2.22
NCAPD3-207ENST00000528065 CENPEQ02224 2701 aa1.2□□□□□ -2.22
NCAPD3-207ENST00000528065 HECTD4Q9Y4D8 3996 aa1.19□□□□□ -2.22
NCAPD3-207ENST00000528065 ZFYVE26Q68DK2 2539 aa1.19□□□□□ -2.22
NCAPD3-207ENST00000528065 NBEAL2Q6ZNJ1 2754 aa1.19□□□□□ -2.22
NCAPD3-207ENST00000528065 STARD9Q9P2P6 4700 aa1.19□□□□□ -2.22
NCAPD3-207ENST00000528065 UNC79Q9P2D8 2635 aa1.19□□□□□ -2.22
NCAPD3-207ENST00000528065 GCN1Q92616 2671 aaKnown RBP1.18□□□□□ -2.22
NCAPD3-207ENST00000528065 CSMD3Q7Z407 3707 aa1.18□□□□□ -2.22
NCAPD3-207ENST00000528065 HIVEP1P15822 2718 aa1.17□□□□□ -2.22
NCAPD3-207ENST00000528065 NSD1Q96L73 2696 aaPredicted RBP1.17□□□□□ -2.22
NCAPD3-207ENST00000528065 TGP01266 2768 aa1.17□□□□□ -2.22
NCAPD3-207ENST00000528065 DNAH5Q8TE73 4624 aa1.17□□□□□ -2.22
NCAPD3-207ENST00000528065 SACSQ9NZJ4 4579 aa1.17□□□□□ -2.22
NCAPD3-207ENST00000528065 TENM4Q6N022 2769 aa1.17□□□□□ -2.22
NCAPD3-207ENST00000528065 TEP1Q99973 2627 aaKnown RBP1.16□□□□□ -2.22
NCAPD3-207ENST00000528065 ATRQ13535 2644 aa1.15□□□□□ -2.23
NCAPD3-207ENST00000528065 PKHD1L1Q86WI1 4243 aa1.14□□□□□ -2.23
NCAPD3-207ENST00000528065 FASNP49327 2511 aaKnown RBP1.14□□□□□ -2.23
NCAPD3-207ENST00000528065 VPS13BQ7Z7G8 4022 aa1.14□□□□□ -2.23
NCAPD3-207ENST00000528065 LRP1BQ9NZR2 4599 aa1.14□□□□□ -2.23
NCAPD3-207ENST00000528065 TENM1Q9UKZ4 2725 aa1.13□□□□□ -2.23
NCAPD3-207ENST00000528065 KMT2AQ03164 3969 aa1.13□□□□□ -2.23
NCAPD3-207ENST00000528065 M0R2T5 61 aa1.13□□□□□ -2.23
NCAPD3-207ENST00000528065 KRTAP2-3P0C7H8 128 aa1.13□□□□□ -2.23
NCAPD3-207ENST00000528065 KRTAP21-3Q3LHN1 58 aa1.13□□□□□ -2.23
NCAPD3-207ENST00000528065 KRTAP8-1Q8IUC2 63 aa1.13□□□□□ -2.23
NCAPD3-207ENST00000528065 KRTAP2-4Q9BYR9 128 aa1.13□□□□□ -2.23
NCAPD3-207ENST00000528065 KRTAP2-1Q9BYU5 128 aa1.13□□□□□ -2.23
NCAPD3-207ENST00000528065 APOBP04114 4563 aaKnown RBP1.13□□□□□ -2.23
NCAPD3-207ENST00000528065 ITPR2Q14571 2701 aa1.13□□□□□ -2.23
NCAPD3-207ENST00000528065 MAST4O15021 2626 aa1.13□□□□□ -2.23
NCAPD3-207ENST00000528065 STAB2Q8WWQ8 2551 aa1.12□□□□□ -2.23
NCAPD3-207ENST00000528065 FAT2Q9NYQ8 4349 aa1.12□□□□□ -2.23
NCAPD3-207ENST00000528065 PKHD1P08F94 4074 aa1.12□□□□□ -2.23
NCAPD3-207ENST00000528065 TENM3Q9P273 2699 aa1.12□□□□□ -2.23
NCAPD3-207ENST00000528065 PKD1L1Q8TDX9 2849 aa1.11□□□□□ -2.23
NCAPD3-207ENST00000528065 NBEAL1Q6ZS30 2694 aa1.11□□□□□ -2.23
NCAPD3-207ENST00000528065 DNHD1Q96M86 4753 aa1.11□□□□□ -2.23
NCAPD3-207ENST00000528065 COL7A1Q02388 2944 aa1.1□□□□□ -2.23
NCAPD3-207ENST00000528065 KRTAP10-4P60372 401 aaPredicted RBP1.1□□□□□ -2.23
NCAPD3-207ENST00000528065 PKD1P98161 4303 aa1.09□□□□□ -2.23
NCAPD3-207ENST00000528065 DYNC1H1Q14204 4646 aaKnown RBP1.09□□□□□ -2.24
NCAPD3-207ENST00000528065 TNXBP22105 4242 aa1.08□□□□□ -2.24
NCAPD3-207ENST00000528065 FLNBO75369 2602 aaKnown RBP1.08□□□□□ -2.24
NCAPD3-207ENST00000528065 FAT3Q8TDW7 4589 aa1.08□□□□□ -2.24
NCAPD3-207ENST00000528065 HSPG2P98160 4391 aa1.08□□□□□ -2.24
NCAPD3-207ENST00000528065 HYDINQ4G0P3 5121 aa1.08□□□□□ -2.24
NCAPD3-207ENST00000528065 STAB1Q9NY15 2570 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms