RNA–Protein interactions for RNA: ENST00000528065.1

NCAPD3-207, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 4

Gene NCAPD3, Length 557 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-207ENST00000528065 AEBP2Q6ZN18 517 aaPredicted RBP15.84■□□□□ 0.13
NCAPD3-207ENST00000528065 CHIC1Q5VXU3 224 aa15.58■□□□□ 0.08
NCAPD3-207ENST00000528065 PHF23Q9BUL5 403 aaPredicted RBP13.73□□□□□ -0.21
NCAPD3-207ENST00000528065 SENP3Q9H4L4 574 aaPredicted RBP13.51□□□□□ -0.25
NCAPD3-207ENST00000528065 POTEDQ86YR6 584 aa12.77□□□□□ -0.37
NCAPD3-207ENST00000528065 PLPPR3Q6T4P5 718 aa12.71□□□□□ -0.37
NCAPD3-207ENST00000528065 FOXD1Q16676 465 aa12.63□□□□□ -0.39
NCAPD3-207ENST00000528065 ADRA2BP18089 450 aa12.1□□□□□ -0.47
NCAPD3-207ENST00000528065 MSH5O43196 834 aa12.09□□□□□ -0.47
NCAPD3-207ENST00000528065 PPP6R1Q9UPN7 881 aa12.09□□□□□ -0.47
NCAPD3-207ENST00000528065 PIAS4Q8N2W9 510 aaPredicted RBP11.76□□□□□ -0.53
NCAPD3-207ENST00000528065 PPP4R3CPQ6ZMV5 832 aa11.23□□□□□ -0.61
NCAPD3-207ENST00000528065 KCNA4P22459 653 aa11.12□□□□□ -0.63
NCAPD3-207ENST00000528065 SCAF1Q9H7N4 1312 aaKnown RBP11.05□□□□□ -0.64
NCAPD3-207ENST00000528065 NCBP3Q53F19 620 aaKnown RBP10.97□□□□□ -0.65
NCAPD3-207ENST00000528065 MAPK8IP2Q13387 824 aaPredicted RBP10.95□□□□□ -0.66
NCAPD3-207ENST00000528065 CNKSR2Q8WXI2 1034 aa10.88□□□□□ -0.67
NCAPD3-207ENST00000528065 NPM3O75607 178 aaKnown RBP10.81□□□□□ -0.68
NCAPD3-207ENST00000528065 CACNB1Q02641 598 aaPredicted RBP10.78□□□□□ -0.68
NCAPD3-207ENST00000528065 DMRT2Q9Y5R5 561 aa10.72□□□□□ -0.69
NCAPD3-207ENST00000528065 SLC4A1APQ9BWU0 796 aaKnown RBP10.62□□□□□ -0.71
NCAPD3-207ENST00000528065 RNF216Q9NWF9 866 aaPredicted RBP10.62□□□□□ -0.71
NCAPD3-207ENST00000528065 HOXD11P31277 338 aaPredicted RBP10.54□□□□□ -0.72
NCAPD3-207ENST00000528065 EHMT2Q96KQ7 1210 aa10.5□□□□□ -0.73
NCAPD3-207ENST00000528065 DNAJC5BQ9UF47 199 aa10.41□□□□□ -0.74
NCAPD3-207ENST00000528065 DCAF8L1A6NGE4 600 aa10.31□□□□□ -0.76
NCAPD3-207ENST00000528065 CSRNP3Q8WYN3 585 aa10.29□□□□□ -0.76
NCAPD3-207ENST00000528065 ZBTB22O15209 634 aa10.23□□□□□ -0.77
NCAPD3-207ENST00000528065 RNF39Q9H2S5 420 aa10.22□□□□□ -0.77
NCAPD3-207ENST00000528065 SLC4A2P04920 1241 aa10.18□□□□□ -0.78
NCAPD3-207ENST00000528065 FOXD4L1Q9NU39 408 aa10.18□□□□□ -0.78
NCAPD3-207ENST00000528065 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.09□□□□□ -0.79
NCAPD3-207ENST00000528065 C1QBPQ07021 282 aaKnown RBP10.07□□□□□ -0.8
NCAPD3-207ENST00000528065 MYCNP04198 464 aaPredicted RBP9.97□□□□□ -0.81
NCAPD3-207ENST00000528065 POTEHQ6S545 545 aa9.92□□□□□ -0.82
NCAPD3-207ENST00000528065 U3KPZ7 1027 aaPredicted RBP9.92□□□□□ -0.82
NCAPD3-207ENST00000528065 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.82□□□□□ -0.84
NCAPD3-207ENST00000528065 HNRNPUL2Q1KMD3 747 aaKnown RBP9.82□□□□□ -0.84
NCAPD3-207ENST00000528065 ATXN8OSP0DMR3 200 aa9.8□□□□□ -0.84
NCAPD3-207ENST00000528065 SAMD1Q6SPF0 538 aaPredicted RBP9.79□□□□□ -0.84
NCAPD3-207ENST00000528065 ATF5Q9Y2D1 282 aaPredicted RBP9.73□□□□□ -0.85
NCAPD3-207ENST00000528065 APLP2Q06481 763 aa9.68□□□□□ -0.86
NCAPD3-207ENST00000528065 SPINK5Q9NQ38 1064 aaPredicted RBP9.62□□□□□ -0.87
NCAPD3-207ENST00000528065 CAPN15O75808 1086 aa9.59□□□□□ -0.87
NCAPD3-207ENST00000528065 TRHP20396 242 aaPredicted RBP9.58□□□□□ -0.88
NCAPD3-207ENST00000528065 ZNF219Q9P2Y4 722 aaPredicted RBP9.56□□□□□ -0.88
NCAPD3-207ENST00000528065 POLA2Q14181 598 aa9.44□□□□□ -0.9
NCAPD3-207ENST00000528065 ABCB7O75027 752 aa9.42□□□□□ -0.9
NCAPD3-207ENST00000528065 DSG3P32926 999 aa9.39□□□□□ -0.91
NCAPD3-207ENST00000528065 FBLN2P98095 1184 aa9.3□□□□□ -0.92
NCAPD3-207ENST00000528065 MKRN4PQ13434 485 aaPredicted RBP9.3□□□□□ -0.92
NCAPD3-207ENST00000528065 FKBP8Q14318 412 aa9.3□□□□□ -0.92
NCAPD3-207ENST00000528065 ZBTB12Q9Y330 459 aaPredicted RBP9.25□□□□□ -0.93
NCAPD3-207ENST00000528065 SPDYE4A6NLX3 237 aa9.16□□□□□ -0.94
NCAPD3-207ENST00000528065 OSCARQ8IYS5 282 aa9.1□□□□□ -0.95
NCAPD3-207ENST00000528065 ZNF692Q9BU19 519 aaPredicted RBP9.05□□□□□ -0.96
NCAPD3-207ENST00000528065 CHRDL2Q6WN34 429 aa9.03□□□□□ -0.96
NCAPD3-207ENST00000528065 SPDYE2BA6NHP3 402 aa9.02□□□□□ -0.97
NCAPD3-207ENST00000528065 SPDYE6P0CI01 402 aa9.02□□□□□ -0.97
NCAPD3-207ENST00000528065 SPDYE2Q495Y8 402 aa9.02□□□□□ -0.97
NCAPD3-207ENST00000528065 SP7Q8TDD2 431 aaPredicted RBP9.02□□□□□ -0.97
NCAPD3-207ENST00000528065 RBM42Q9BTD8 480 aaKnown RBP9.02□□□□□ -0.97
NCAPD3-207ENST00000528065 PROM2Q8N271 834 aa8.98□□□□□ -0.97
NCAPD3-207ENST00000528065 SSUH2Q9Y2M2 353 aa8.96□□□□□ -0.98
NCAPD3-207ENST00000528065 PABPN1Q86U42 306 aaKnown RBP eCLIP8.92□□□□□ -0.98
NCAPD3-207ENST00000528065 FBXO3Q9UK99 471 aa8.91□□□□□ -0.98
NCAPD3-207ENST00000528065 AKT1S1Q96B36 256 aa8.83□□□□□ -1
NCAPD3-207ENST00000528065 VASPP50552 380 aaPredicted RBP8.79□□□□□ -1
NCAPD3-207ENST00000528065 STAG3Q9UJ98 1225 aa8.78□□□□□ -1
NCAPD3-207ENST00000528065 REM2Q8IYK8 340 aaPredicted RBP8.77□□□□□ -1.01
NCAPD3-207ENST00000528065 HAX1O00165 279 aa8.76□□□□□ -1.01
NCAPD3-207ENST00000528065 SPDYE1Q8NFV5 336 aaPredicted RBP8.74□□□□□ -1.01
NCAPD3-207ENST00000528065 CLEC11AQ9Y240 323 aa8.73□□□□□ -1.01
NCAPD3-207ENST00000528065 MIER1Q8N108 512 aa8.7□□□□□ -1.02
NCAPD3-207ENST00000528065 IFNLR1Q8IU57 520 aaPredicted RBP8.69□□□□□ -1.02
NCAPD3-207ENST00000528065 PLCD3Q8N3E9 789 aa8.69□□□□□ -1.02
NCAPD3-207ENST00000528065 PIP4P2Q8N4L2 257 aa8.68□□□□□ -1.02
NCAPD3-207ENST00000528065 RTN4Q9NQC3 1192 aaKnown RBP8.68□□□□□ -1.02
NCAPD3-207ENST00000528065 AMER1Q5JTC6 1135 aaPredicted RBP8.67□□□□□ -1.02
NCAPD3-207ENST00000528065 PITPNM1O00562 1244 aa8.66□□□□□ -1.02
NCAPD3-207ENST00000528065 PRR29P0C7W0 189 aa8.66□□□□□ -1.02
NCAPD3-207ENST00000528065 KLHL34Q8N239 644 aa8.66□□□□□ -1.02
NCAPD3-207ENST00000528065 PLEKHG5O94827 1062 aa8.62□□□□□ -1.03
NCAPD3-207ENST00000528065 SPOCK2Q92563 424 aa8.57□□□□□ -1.04
NCAPD3-207ENST00000528065 CREBZFQ9NS37 354 aa8.56□□□□□ -1.04
NCAPD3-207ENST00000528065 ZBTB47Q9UFB7 747 aaPredicted RBP8.54□□□□□ -1.04
NCAPD3-207ENST00000528065 FXR2P51116 673 aaKnown RBP eCLIP8.51□□□□□ -1.05
NCAPD3-207ENST00000528065 EVX2Q03828 476 aa8.51□□□□□ -1.05
NCAPD3-207ENST00000528065 CHADLQ6NUI6 762 aa8.5□□□□□ -1.05
NCAPD3-207ENST00000528065 PLSCR2Q9NRY7 297 aa8.49□□□□□ -1.05
NCAPD3-207ENST00000528065 MNX1P50219 401 aaPredicted RBP8.47□□□□□ -1.05
NCAPD3-207ENST00000528065 LHX8Q68G74 356 aa8.47□□□□□ -1.05
NCAPD3-207ENST00000528065 PRKAR2AP13861 404 aaKnown RBP8.46□□□□□ -1.06
NCAPD3-207ENST00000528065 PKD2Q13563 968 aa8.45□□□□□ -1.06
NCAPD3-207ENST00000528065 CIZ1Q9ULV3 898 aaPredicted RBP8.44□□□□□ -1.06
NCAPD3-207ENST00000528065 NUBP1P53384 320 aa8.43□□□□□ -1.06
NCAPD3-207ENST00000528065 NPM1P06748 294 aaKnown RBP eCLIP8.42□□□□□ -1.06
NCAPD3-207ENST00000528065 FARP1Q9Y4F1 1045 aaPredicted RBP8.41□□□□□ -1.06
NCAPD3-207ENST00000528065 DCAF8Q5TAQ9 597 aa8.4□□□□□ -1.06
NCAPD3-207ENST00000528065 ECM2O94769 699 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms