RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 COL7A1Q02388 2944 aa7.76□□□□□ -1.17
BEST1-203ENST00000524877 VPS13DQ5THJ4 4388 aa7.75□□□□□ -1.17
BEST1-203ENST00000524877 PLECQ15149 4684 aaKnown RBP7.72□□□□□ -1.17
BEST1-203ENST00000524877 DNHD1Q96M86 4753 aa7.72□□□□□ -1.17
BEST1-203ENST00000524877 KRTAP10-6P60371 365 aaPredicted RBP7.65□□□□□ -1.18
BEST1-203ENST00000524877 DNAH17Q9UFH2 4485 aa7.63□□□□□ -1.19
BEST1-203ENST00000524877 DYNC1H1Q14204 4646 aaKnown RBP7.61□□□□□ -1.19
BEST1-203ENST00000524877 KRTAP3-3Q9BYR6 98 aa7.57□□□□□ -1.2
BEST1-203ENST00000524877 DNAH3Q8TD57 4116 aa7.57□□□□□ -1.2
BEST1-203ENST00000524877 DNAH2Q9P225 4427 aa7.56□□□□□ -1.2
BEST1-203ENST00000524877 DNAH6Q9C0G6 4158 aa7.56□□□□□ -1.2
BEST1-203ENST00000524877 SRRM2Q9UQ35 2752 aaKnown RBP7.54□□□□□ -1.2
BEST1-203ENST00000524877 FAT2Q9NYQ8 4349 aa7.54□□□□□ -1.2
BEST1-203ENST00000524877 DYNC2H1Q8NCM8 4307 aaKnown RBP7.5□□□□□ -1.21
BEST1-203ENST00000524877 STARD9Q9P2P6 4700 aa7.49□□□□□ -1.21
BEST1-203ENST00000524877 KRTAP10-12P60413 245 aa7.48□□□□□ -1.21
BEST1-203ENST00000524877 LRP1BQ9NZR2 4599 aa7.46□□□□□ -1.21
BEST1-203ENST00000524877 MT1HP80294 61 aa7.46□□□□□ -1.21
BEST1-203ENST00000524877 PRKDCP78527 4128 aaKnown RBP7.45□□□□□ -1.22
BEST1-203ENST00000524877 KRTAP3-2Q9BYR7 98 aa7.45□□□□□ -1.22
BEST1-203ENST00000524877 CMYA5Q8N3K9 4069 aa7.43□□□□□ -1.22
BEST1-203ENST00000524877 KRTAP4-1Q9BYQ7 146 aa7.42□□□□□ -1.22
BEST1-203ENST00000524877 SACSQ9NZJ4 4579 aa7.3□□□□□ -1.24
BEST1-203ENST00000524877 DNAH8Q96JB1 4490 aa7.27□□□□□ -1.25
BEST1-203ENST00000524877 KRTAP8-1Q8IUC2 63 aa7.23□□□□□ -1.25
BEST1-203ENST00000524877 LORP23490 312 aaPredicted RBP7.21□□□□□ -1.25
BEST1-203ENST00000524877 MT2AP02795 61 aa7.2□□□□□ -1.26
BEST1-203ENST00000524877 RYR1P21817 5038 aa7.18□□□□□ -1.26
BEST1-203ENST00000524877 DNAH7Q8WXX0 4024 aa7.16□□□□□ -1.26
BEST1-203ENST00000524877 CSMD3Q7Z407 3707 aa7.15□□□□□ -1.26
BEST1-203ENST00000524877 CRCT1Q9UGL9 99 aa7.15□□□□□ -1.27
BEST1-203ENST00000524877 KRTAP17-1Q9BYP8 105 aa7.14□□□□□ -1.27
BEST1-203ENST00000524877 FAT1Q14517 4588 aa7.13□□□□□ -1.27
BEST1-203ENST00000524877 KMT2AQ03164 3969 aa7.13□□□□□ -1.27
BEST1-203ENST00000524877 RYR3Q15413 4870 aa7.12□□□□□ -1.27
BEST1-203ENST00000524877 KRTAP12-3P60328 96 aa7.12□□□□□ -1.27
BEST1-203ENST00000524877 BIRC6Q9NR09 4857 aa7.07□□□□□ -1.28
BEST1-203ENST00000524877 LCE3AQ5TA76 89 aa7.06□□□□□ -1.28
BEST1-203ENST00000524877 RYR2Q92736 4967 aa7.06□□□□□ -1.28
BEST1-203ENST00000524877 MT1FP04733 61 aa7.03□□□□□ -1.28
BEST1-203ENST00000524877 SPRR2GQ9BYE4 73 aa7□□□□□ -1.29
BEST1-203ENST00000524877 APOBP04114 4563 aaKnown RBP7□□□□□ -1.29
BEST1-203ENST00000524877 VPS13BQ7Z7G8 4022 aa6.93□□□□□ -1.3
BEST1-203ENST00000524877 FAT3Q8TDW7 4589 aa6.92□□□□□ -1.3
BEST1-203ENST00000524877 HERC1Q15751 4861 aa6.88□□□□□ -1.31
BEST1-203ENST00000524877 HSPG2P98160 4391 aa6.84□□□□□ -1.31
BEST1-203ENST00000524877 PKHD1L1Q86WI1 4243 aa6.81□□□□□ -1.32
BEST1-203ENST00000524877 SPRR2FQ96RM1 72 aa6.81□□□□□ -1.32
BEST1-203ENST00000524877 KIAA1109Q2LD37 5005 aa6.77□□□□□ -1.33
BEST1-203ENST00000524877 HECTD4Q9Y4D8 3996 aa6.76□□□□□ -1.33
BEST1-203ENST00000524877 LYSTQ99698 3801 aa6.73□□□□□ -1.33
BEST1-203ENST00000524877 KRTAP10-5P60370 271 aa6.69□□□□□ -1.34
BEST1-203ENST00000524877 HYDINQ4G0P3 5121 aa6.68□□□□□ -1.34
BEST1-203ENST00000524877 FRAS1Q86XX4 4008 aa6.66□□□□□ -1.34
BEST1-203ENST00000524877 HERC2O95714 4834 aa6.65□□□□□ -1.34
BEST1-203ENST00000524877 KRTAP19-8Q3LI54 63 aa6.6□□□□□ -1.35
BEST1-203ENST00000524877 KRTAP10-7P60409 375 aaPredicted RBP6.59□□□□□ -1.36
BEST1-203ENST00000524877 SPRR2EP22531 72 aa6.56□□□□□ -1.36
BEST1-203ENST00000524877 SPRR2BP35325 72 aa6.56□□□□□ -1.36
BEST1-203ENST00000524877 SPRR2AP35326 72 aa6.56□□□□□ -1.36
BEST1-203ENST00000524877 KRTAP9-8Q9BYQ0 159 aa6.53□□□□□ -1.36
BEST1-203ENST00000524877 MYCBP2O75592 4640 aa6.53□□□□□ -1.36
BEST1-203ENST00000524877 PKD1P98161 4303 aa6.53□□□□□ -1.36
BEST1-203ENST00000524877 LRP1Q07954 4544 aaKnown RBP6.53□□□□□ -1.36
BEST1-203ENST00000524877 KRTAP19-5Q3LI72 72 aa6.53□□□□□ -1.36
BEST1-203ENST00000524877 LCE2CQ5TA81 110 aa6.52□□□□□ -1.37
BEST1-203ENST00000524877 KRTAP19-1Q8IUB9 90 aa6.48□□□□□ -1.37
BEST1-203ENST00000524877 KRTAP9-3Q9BYQ3 159 aa6.42□□□□□ -1.38
BEST1-203ENST00000524877 MUC17Q685J3 4493 aa6.38□□□□□ -1.39
BEST1-203ENST00000524877 PKHD1P08F94 4074 aa6.38□□□□□ -1.39
BEST1-203ENST00000524877 KRTAP19-4Q3LI73 84 aa6.38□□□□□ -1.39
BEST1-203ENST00000524877 SPRR2DP22532 72 aa6.37□□□□□ -1.39
BEST1-203ENST00000524877 MT1BP07438 61 aa6.36□□□□□ -1.39
BEST1-203ENST00000524877 TNXBP22105 4242 aa6.35□□□□□ -1.39
BEST1-203ENST00000524877 PCLOQ9Y6V0 5065 aa6.33□□□□□ -1.4
BEST1-203ENST00000524877 MT1XP80297 61 aa6.31□□□□□ -1.4
BEST1-203ENST00000524877 KRTAP9-2Q9BYQ4 174 aa6.31□□□□□ -1.4
BEST1-203ENST00000524877 LCE3CQ5T5A8 94 aa6.27□□□□□ -1.41
BEST1-203ENST00000524877 LCE2BO14633 110 aa6.26□□□□□ -1.41
BEST1-203ENST00000524877 KMT2CQ8NEZ4 4911 aaKnown RBP6.25□□□□□ -1.41
BEST1-203ENST00000524877 LPAP08519 4548 aa6.21□□□□□ -1.42
BEST1-203ENST00000524877 EPPK1P58107 5090 aaKnown RBP6.2□□□□□ -1.42
BEST1-203ENST00000524877 KRTAP19-2Q3LHN2 52 aa6.2□□□□□ -1.42
BEST1-203ENST00000524877 LCE2DQ5TA82 110 aaPredicted RBP6.2□□□□□ -1.42
BEST1-203ENST00000524877 KRTAP9-6A0A140TA67 174 aa6.1□□□□□ -1.43
BEST1-203ENST00000524877 LRP2P98164 4655 aa6.07□□□□□ -1.44
BEST1-203ENST00000524877 ABCA13Q86UQ4 5058 aa6.07□□□□□ -1.44
BEST1-203ENST00000524877 LCE2AQ5TA79 106 aaPredicted RBP6.04□□□□□ -1.44
BEST1-203ENST00000524877 MT1GP13640 62 aa6.03□□□□□ -1.44
BEST1-203ENST00000524877 KRTAP19-6Q3LI70 58 aa6.03□□□□□ -1.44
BEST1-203ENST00000524877 KRTAP4-8A0A0G2JLE6 195 aa6.02□□□□□ -1.45
BEST1-203ENST00000524877 KRTAP4-8Q9BYQ9 185 aa6.02□□□□□ -1.45
BEST1-203ENST00000524877 SPRR5A0A1B0GTR4 108 aa6□□□□□ -1.45
BEST1-203ENST00000524877 KRTAP12-4P60329 112 aa5.96□□□□□ -1.46
BEST1-203ENST00000524877 FLGP20930 4061 aaPredicted RBP5.92□□□□□ -1.46
BEST1-203ENST00000524877 KRTAP19-3Q7Z4W3 81 aa5.86□□□□□ -1.47
BEST1-203ENST00000524877 LCE3BQ5TA77 95 aa5.76□□□□□ -1.49
BEST1-203ENST00000524877 MT1EP04732 61 aa5.72□□□□□ -1.49
BEST1-203ENST00000524877 RNF213Q63HN8 5207 aa5.71□□□□□ -1.5
BEST1-203ENST00000524877 FAT4Q6V0I7 4981 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms