RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 MAPK1IP1LQ8NDC0 245 aa3.26□□□□□ -1.89
SDC2-208ENST00000523877 DNAH1Q9P2D7 4330 aa3.24□□□□□ -1.89
SDC2-208ENST00000523877 KRTAP10-7P60409 375 aaPredicted RBP3.24□□□□□ -1.89
SDC2-208ENST00000523877 DYNC2H1Q8NCM8 4307 aaKnown RBP3.24□□□□□ -1.89
SDC2-208ENST00000523877 SPINK1P00995 79 aa3.22□□□□□ -1.89
SDC2-208ENST00000523877 APLNQ9ULZ1 77 aa3.22□□□□□ -1.89
SDC2-208ENST00000523877 UBR4Q5T4S7 5183 aa3.21□□□□□ -1.9
SDC2-208ENST00000523877 COL7A1Q02388 2944 aa3.19□□□□□ -1.9
SDC2-208ENST00000523877 NOP10Q9NPE3 64 aaKnown RBP3.19□□□□□ -1.9
SDC2-208ENST00000523877 S4R3F8 94 aa3.19□□□□□ -1.9
SDC2-208ENST00000523877 CMYA5Q8N3K9 4069 aa3.19□□□□□ -1.9
SDC2-208ENST00000523877 KRTAP13-2Q52LG2 175 aa3.18□□□□□ -1.9
SDC2-208ENST00000523877 ROS1P08922 2347 aa3.18□□□□□ -1.9
SDC2-208ENST00000523877 NOTCH3Q9UM47 2321 aa3.18□□□□□ -1.9
SDC2-208ENST00000523877 KRTAP10-6P60371 365 aaPredicted RBP3.17□□□□□ -1.9
SDC2-208ENST00000523877 KRTAP1-5Q9BYS1 174 aa3.15□□□□□ -1.91
SDC2-208ENST00000523877 SPRR5A0A1B0GTR4 108 aa3.14□□□□□ -1.91
SDC2-208ENST00000523877 LYSTQ99698 3801 aa3.14□□□□□ -1.91
SDC2-208ENST00000523877 PRO0255Q9UI72 69 aa3.14□□□□□ -1.91
SDC2-208ENST00000523877 TENM2Q9NT68 2774 aa3.14□□□□□ -1.91
SDC2-208ENST00000523877 KIAA1109Q2LD37 5005 aa3.13□□□□□ -1.91
SDC2-208ENST00000523877 ABCA13Q86UQ4 5058 aa3.13□□□□□ -1.91
SDC2-208ENST00000523877 DNAH9Q9NYC9 4486 aa3.11□□□□□ -1.91
SDC2-208ENST00000523877 HERC1Q15751 4861 aa3.11□□□□□ -1.91
SDC2-208ENST00000523877 KRTAP2-2Q9BYT5 123 aa3.1□□□□□ -1.91
SDC2-208ENST00000523877 DEFB136Q30KP8 78 aa3.09□□□□□ -1.91
SDC2-208ENST00000523877 Q5VSD8 79 aa3.08□□□□□ -1.92
SDC2-208ENST00000523877 DNAH3Q8TD57 4116 aa3.08□□□□□ -1.92
SDC2-208ENST00000523877 FRAS1Q86XX4 4008 aa3.06□□□□□ -1.92
SDC2-208ENST00000523877 A0A0D9SG42 100 aa3.06□□□□□ -1.92
SDC2-208ENST00000523877 HECTD4Q9Y4D8 3996 aa3.06□□□□□ -1.92
SDC2-208ENST00000523877 CSMD3Q7Z407 3707 aa3.06□□□□□ -1.92
SDC2-208ENST00000523877 STAB2Q8WWQ8 2551 aa3.06□□□□□ -1.92
SDC2-208ENST00000523877 A0A1B0GVY2 172 aa3.04□□□□□ -1.92
SDC2-208ENST00000523877 STARD9Q9P2P6 4700 aa3.04□□□□□ -1.92
SDC2-208ENST00000523877 DNAH7Q8WXX0 4024 aa3.03□□□□□ -1.92
SDC2-208ENST00000523877 LCE1EQ5T753 118 aa3.01□□□□□ -1.93
SDC2-208ENST00000523877 KRTAP10-3P60369 221 aa3□□□□□ -1.93
SDC2-208ENST00000523877 PLECQ15149 4684 aaKnown RBP2.98□□□□□ -1.93
SDC2-208ENST00000523877 KRTAP12-1P59990 96 aa2.98□□□□□ -1.93
SDC2-208ENST00000523877 KRTAP13-4Q3LI77 160 aa2.98□□□□□ -1.93
SDC2-208ENST00000523877 A0A096LNI7 61 aa2.95□□□□□ -1.94
SDC2-208ENST00000523877 HUWE1Q7Z6Z7 4374 aaKnown RBP2.94□□□□□ -1.94
SDC2-208ENST00000523877 A0A096LPF7 62 aa2.94□□□□□ -1.94
SDC2-208ENST00000523877 SPINK6Q6UWN8 80 aa2.94□□□□□ -1.94
SDC2-208ENST00000523877 DNAH10Q8IVF4 4471 aa2.92□□□□□ -1.94
SDC2-208ENST00000523877 M0QZ58 72 aa2.92□□□□□ -1.94
SDC2-208ENST00000523877 PKHD1P08F94 4074 aa2.92□□□□□ -1.94
SDC2-208ENST00000523877 DMBT1Q9UGM3 2413 aaPredicted RBP2.91□□□□□ -1.94
SDC2-208ENST00000523877 DNAH11Q96DT5 4516 aa2.91□□□□□ -1.94
SDC2-208ENST00000523877 DYNC1H1Q14204 4646 aaKnown RBP2.91□□□□□ -1.94
SDC2-208ENST00000523877 HSPG2P98160 4391 aa2.91□□□□□ -1.94
SDC2-208ENST00000523877 KRTAP1-4P0C5Y4 121 aa2.89□□□□□ -1.95
SDC2-208ENST00000523877 HMCN2Q8NDA2 5059 aa2.89□□□□□ -1.95
SDC2-208ENST00000523877 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
SDC2-208ENST00000523877 KRTAP13-1Q8IUC0 172 aa2.87□□□□□ -1.95
SDC2-208ENST00000523877 KMT2AQ03164 3969 aa2.87□□□□□ -1.95
SDC2-208ENST00000523877 H3BNG1 76 aa2.86□□□□□ -1.95
SDC2-208ENST00000523877 FAT2Q9NYQ8 4349 aa2.85□□□□□ -1.95
SDC2-208ENST00000523877 LINC01556Q5JQF7 62 aa2.85□□□□□ -1.95
SDC2-208ENST00000523877 DNAH2Q9P225 4427 aa2.83□□□□□ -1.96
SDC2-208ENST00000523877 MYCBP2O75592 4640 aa2.83□□□□□ -1.96
SDC2-208ENST00000523877 VPS13DQ5THJ4 4388 aa2.82□□□□□ -1.96
SDC2-208ENST00000523877 MT3P25713 68 aa2.82□□□□□ -1.96
SDC2-208ENST00000523877 APOBP04114 4563 aaKnown RBP2.8□□□□□ -1.96
SDC2-208ENST00000523877 MUC2Q02817 5179 aa2.79□□□□□ -1.96
SDC2-208ENST00000523877 KRTAP10-1P60331 282 aa2.79□□□□□ -1.96
SDC2-208ENST00000523877 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
SDC2-208ENST00000523877 PKD1P98161 4303 aa2.79□□□□□ -1.96
SDC2-208ENST00000523877 SRRM2Q9UQ35 2752 aaKnown RBP2.78□□□□□ -1.97
SDC2-208ENST00000523877 RNF213Q63HN8 5207 aa2.77□□□□□ -1.97
SDC2-208ENST00000523877 SPART-AS1P0CW21 52 aa2.77□□□□□ -1.97
SDC2-208ENST00000523877 KRTAP5-4Q6L8H1 288 aa2.77□□□□□ -1.97
SDC2-208ENST00000523877 LRP1BQ9NZR2 4599 aa2.76□□□□□ -1.97
SDC2-208ENST00000523877 DNAH6Q9C0G6 4158 aa2.76□□□□□ -1.97
SDC2-208ENST00000523877 KRTAP5-9P26371 169 aa2.76□□□□□ -1.97
SDC2-208ENST00000523877 DNAH17Q9UFH2 4485 aa2.76□□□□□ -1.97
SDC2-208ENST00000523877 FAT4Q6V0I7 4981 aa2.74□□□□□ -1.97
SDC2-208ENST00000523877 KRTAP10-10P60014 251 aa2.73□□□□□ -1.97
SDC2-208ENST00000523877 DNAH5Q8TE73 4624 aa2.73□□□□□ -1.97
SDC2-208ENST00000523877 HTN3P15516 51 aa2.7□□□□□ -1.98
SDC2-208ENST00000523877 KRTAP10-5P60370 271 aa2.7□□□□□ -1.98
SDC2-208ENST00000523877 FAT1Q14517 4588 aa2.69□□□□□ -1.98
SDC2-208ENST00000523877 LRP2P98164 4655 aa2.68□□□□□ -1.98
SDC2-208ENST00000523877 VPS13BQ7Z7G8 4022 aa2.65□□□□□ -1.99
SDC2-208ENST00000523877 KRTAP9-6A8MVA2 160 aa2.64□□□□□ -1.99
SDC2-208ENST00000523877 CRCT1Q9UGL9 99 aa2.64□□□□□ -1.99
SDC2-208ENST00000523877 TNP1P09430 55 aa2.63□□□□□ -1.99
SDC2-208ENST00000523877 FSIP2Q5CZC0 6907 aa2.62□□□□□ -1.99
SDC2-208ENST00000523877 PKHD1L1Q86WI1 4243 aa2.59□□□□□ -2
SDC2-208ENST00000523877 DEFB135Q30KP9 77 aa2.57□□□□□ -2
SDC2-208ENST00000523877 LRP1Q07954 4544 aaKnown RBP2.57□□□□□ -2
SDC2-208ENST00000523877 RPS29P62273 56 aaKnown RBP2.56□□□□□ -2
SDC2-208ENST00000523877 FAT3Q8TDW7 4589 aa2.55□□□□□ -2
SDC2-208ENST00000523877 DEFB4AO15263 64 aa2.54□□□□□ -2
SDC2-208ENST00000523877 KRTAP10-12P60413 245 aa2.53□□□□□ -2
SDC2-208ENST00000523877 TNXBP22105 4242 aa2.51□□□□□ -2.01
SDC2-208ENST00000523877 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
SDC2-208ENST00000523877 C9orf92A6NGG3 77 aa2.49□□□□□ -2.01
SDC2-208ENST00000523877 SMR3BP02814 79 aaPredicted RBP2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms