RNA–Protein interactions for RNA: ENST00000523619.5

PSD3-218, Transcript of pleckstrin and Sec7 domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PSD3, Length 8,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSD3-218ENST00000523619 LORP23490 312 aaPredicted RBP2.85□□□□□ -1.95
PSD3-218ENST00000523619 ALMS1Q8TCU4 4167 aa2.83□□□□□ -1.96
PSD3-218ENST00000523619 HUWE1Q7Z6Z7 4374 aaKnown RBP2.81□□□□□ -1.96
PSD3-218ENST00000523619 MT1HP80294 61 aa2.81□□□□□ -1.96
PSD3-218ENST00000523619 SVEP1Q4LDE5 3571 aa2.79□□□□□ -1.96
PSD3-218ENST00000523619 PLECQ15149 4684 aaKnown RBP2.78□□□□□ -1.96
PSD3-218ENST00000523619 DNAH5Q8TE73 4624 aa2.78□□□□□ -1.97
PSD3-218ENST00000523619 MT2AP02795 61 aa2.77□□□□□ -1.97
PSD3-218ENST00000523619 SPRR2GQ9BYE4 73 aa2.77□□□□□ -1.97
PSD3-218ENST00000523619 DNAH1Q9P2D7 4330 aa2.76□□□□□ -1.97
PSD3-218ENST00000523619 KRTAP4-1Q9BYQ7 146 aa2.76□□□□□ -1.97
PSD3-218ENST00000523619 SPRR2FQ96RM1 72 aa2.74□□□□□ -1.97
PSD3-218ENST00000523619 DNAH11Q96DT5 4516 aa2.7□□□□□ -1.98
PSD3-218ENST00000523619 FAT1Q14517 4588 aa2.69□□□□□ -1.98
PSD3-218ENST00000523619 MT1FP04733 61 aa2.69□□□□□ -1.98
PSD3-218ENST00000523619 DNHD1Q96M86 4753 aa2.69□□□□□ -1.98
PSD3-218ENST00000523619 DNAH9Q9NYC9 4486 aa2.68□□□□□ -1.98
PSD3-218ENST00000523619 CSMD3Q7Z407 3707 aa2.68□□□□□ -1.98
PSD3-218ENST00000523619 DNAH10Q8IVF4 4471 aa2.67□□□□□ -1.98
PSD3-218ENST00000523619 AKAP9Q99996 3911 aa2.67□□□□□ -1.98
PSD3-218ENST00000523619 VPS13CQ709C8 3753 aa2.65□□□□□ -1.99
PSD3-218ENST00000523619 KRTAP19-5Q3LI72 72 aa2.63□□□□□ -1.99
PSD3-218ENST00000523619 RYR1P21817 5038 aa2.62□□□□□ -1.99
PSD3-218ENST00000523619 BSNQ9UPA5 3926 aa2.61□□□□□ -1.99
PSD3-218ENST00000523619 LCE3CQ5T5A8 94 aa2.61□□□□□ -1.99
PSD3-218ENST00000523619 DNAH2Q9P225 4427 aa2.59□□□□□ -1.99
PSD3-218ENST00000523619 DNAH17Q9UFH2 4485 aa2.58□□□□□ -2
PSD3-218ENST00000523619 SPRR2EP22531 72 aa2.57□□□□□ -2
PSD3-218ENST00000523619 SPRR2BP35325 72 aa2.57□□□□□ -2
PSD3-218ENST00000523619 SPRR2AP35326 72 aa2.57□□□□□ -2
PSD3-218ENST00000523619 SACSQ9NZJ4 4579 aa2.57□□□□□ -2
PSD3-218ENST00000523619 KRTAP19-8Q3LI54 63 aa2.57□□□□□ -2
PSD3-218ENST00000523619 DNAH8Q96JB1 4490 aa2.57□□□□□ -2
PSD3-218ENST00000523619 DYNC1H1Q14204 4646 aaKnown RBP2.56□□□□□ -2
PSD3-218ENST00000523619 CMYA5Q8N3K9 4069 aa2.55□□□□□ -2
PSD3-218ENST00000523619 LRP1BQ9NZR2 4599 aa2.55□□□□□ -2
PSD3-218ENST00000523619 KRTAP12-4P60329 112 aa2.54□□□□□ -2
PSD3-218ENST00000523619 VPS13DQ5THJ4 4388 aa2.53□□□□□ -2
PSD3-218ENST00000523619 FAT2Q9NYQ8 4349 aa2.52□□□□□ -2.01
PSD3-218ENST00000523619 ZNF469Q96JG9 3925 aaPredicted RBP2.52□□□□□ -2.01
PSD3-218ENST00000523619 KRTAP19-1Q8IUB9 90 aa2.51□□□□□ -2.01
PSD3-218ENST00000523619 LRP1Q07954 4544 aaKnown RBP2.51□□□□□ -2.01
PSD3-218ENST00000523619 DNAH3Q8TD57 4116 aa2.5□□□□□ -2.01
PSD3-218ENST00000523619 SPRR2DP22532 72 aa2.5□□□□□ -2.01
PSD3-218ENST00000523619 LCE2BO14633 110 aa2.5□□□□□ -2.01
PSD3-218ENST00000523619 FAT3Q8TDW7 4589 aa2.49□□□□□ -2.01
PSD3-218ENST00000523619 VPS13BQ7Z7G8 4022 aa2.48□□□□□ -2.01
PSD3-218ENST00000523619 DYNC2H1Q8NCM8 4307 aaKnown RBP2.47□□□□□ -2.01
PSD3-218ENST00000523619 RYR3Q15413 4870 aa2.47□□□□□ -2.01
PSD3-218ENST00000523619 MT1GP13640 62 aa2.46□□□□□ -2.02
PSD3-218ENST00000523619 ANK2Q01484 3957 aa2.45□□□□□ -2.02
PSD3-218ENST00000523619 APOBP04114 4563 aaKnown RBP2.45□□□□□ -2.02
PSD3-218ENST00000523619 MT1XP80297 61 aa2.44□□□□□ -2.02
PSD3-218ENST00000523619 KIAA1109Q2LD37 5005 aa2.44□□□□□ -2.02
PSD3-218ENST00000523619 LCE3DQ9BYE3 92 aa2.44□□□□□ -2.02
PSD3-218ENST00000523619 STARD9Q9P2P6 4700 aa2.44□□□□□ -2.02
PSD3-218ENST00000523619 KRTAP9-8Q9BYQ0 159 aa2.43□□□□□ -2.02
PSD3-218ENST00000523619 PRKDCP78527 4128 aaKnown RBP2.43□□□□□ -2.02
PSD3-218ENST00000523619 MT1BP07438 61 aa2.42□□□□□ -2.02
PSD3-218ENST00000523619 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
PSD3-218ENST00000523619 DNAH7Q8WXX0 4024 aa2.42□□□□□ -2.02
PSD3-218ENST00000523619 LCE3BQ5TA77 95 aa2.42□□□□□ -2.02
PSD3-218ENST00000523619 LYSTQ99698 3801 aa2.41□□□□□ -2.02
PSD3-218ENST00000523619 MYCBP2O75592 4640 aa2.39□□□□□ -2.03
PSD3-218ENST00000523619 PCLOQ9Y6V0 5065 aa2.39□□□□□ -2.03
PSD3-218ENST00000523619 KRTAP9-3Q9BYQ3 159 aa2.39□□□□□ -2.03
PSD3-218ENST00000523619 FLGP20930 4061 aaPredicted RBP2.37□□□□□ -2.03
PSD3-218ENST00000523619 KRTAP17-1Q9BYP8 105 aa2.37□□□□□ -2.03
PSD3-218ENST00000523619 DNAH6Q9C0G6 4158 aa2.36□□□□□ -2.03
PSD3-218ENST00000523619 RYR2Q92736 4967 aa2.36□□□□□ -2.03
PSD3-218ENST00000523619 HERC2O95714 4834 aa2.35□□□□□ -2.03
PSD3-218ENST00000523619 LCE2CQ5TA81 110 aa2.35□□□□□ -2.03
PSD3-218ENST00000523619 KMT2AQ03164 3969 aa2.35□□□□□ -2.03
PSD3-218ENST00000523619 EPPK1P58107 5090 aaKnown RBP2.34□□□□□ -2.03
PSD3-218ENST00000523619 PKD1P98161 4303 aa2.34□□□□□ -2.03
PSD3-218ENST00000523619 KRTAP4-8A0A0G2JLE6 195 aa2.34□□□□□ -2.03
PSD3-218ENST00000523619 KRTAP4-8Q9BYQ9 185 aa2.34□□□□□ -2.03
PSD3-218ENST00000523619 SYNE1Q8NF91 8797 aaKnown RBP2.33□□□□□ -2.04
PSD3-218ENST00000523619 KRTAP19-3Q7Z4W3 81 aa2.33□□□□□ -2.04
PSD3-218ENST00000523619 LCE2DQ5TA82 110 aaPredicted RBP2.31□□□□□ -2.04
PSD3-218ENST00000523619 BIRC6Q9NR09 4857 aa2.3□□□□□ -2.04
PSD3-218ENST00000523619 HECTD4Q9Y4D8 3996 aa2.29□□□□□ -2.04
PSD3-218ENST00000523619 MT1LQ93083 61 aa2.28□□□□□ -2.04
PSD3-218ENST00000523619 HERC1Q15751 4861 aa2.27□□□□□ -2.05
PSD3-218ENST00000523619 FRAS1Q86XX4 4008 aa2.27□□□□□ -2.05
PSD3-218ENST00000523619 LRP2P98164 4655 aa2.25□□□□□ -2.05
PSD3-218ENST00000523619 KRTAP9-2Q9BYQ4 174 aa2.25□□□□□ -2.05
PSD3-218ENST00000523619 PKHD1L1Q86WI1 4243 aa2.25□□□□□ -2.05
PSD3-218ENST00000523619 MT1EP04732 61 aa2.24□□□□□ -2.05
PSD3-218ENST00000523619 SPRR5A0A1B0GTR4 108 aa2.23□□□□□ -2.05
PSD3-218ENST00000523619 KRTAP19-6Q3LI70 58 aa2.23□□□□□ -2.05
PSD3-218ENST00000523619 HSPG2P98160 4391 aa2.23□□□□□ -2.05
PSD3-218ENST00000523619 PRM1P04553 51 aa2.2□□□□□ -2.06
PSD3-218ENST00000523619 KRTAP19-2Q3LHN2 52 aa2.19□□□□□ -2.06
PSD3-218ENST00000523619 MT1MQ8N339 61 aa2.18□□□□□ -2.06
PSD3-218ENST00000523619 MT4P47944 62 aa2.18□□□□□ -2.06
PSD3-218ENST00000523619 PKHD1P08F94 4074 aa2.18□□□□□ -2.06
PSD3-218ENST00000523619 KRTAP9-6A0A140TA67 174 aa2.16□□□□□ -2.06
PSD3-218ENST00000523619 HYDINQ4G0P3 5121 aa2.15□□□□□ -2.07
PSD3-218ENST00000523619 KRTAP4-7Q9BYR0 210 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms