RNA–Protein interactions for RNA: ENST00000523619.5

PSD3-218, Transcript of pleckstrin and Sec7 domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PSD3, Length 8,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSD3-218ENST00000523619 DCAF8L2P0C7V8 631 aa12.14□□□□□ -0.47
PSD3-218ENST00000523619 PELP1Q8IZL8 1130 aaKnown RBP11.6□□□□□ -0.55
PSD3-218ENST00000523619 MYT1Q01538 1121 aa11.35□□□□□ -0.59
PSD3-218ENST00000523619 SUPT5HO00267 1087 aaKnown RBP11.29□□□□□ -0.6
PSD3-218ENST00000523619 NISCHQ9Y2I1 1504 aa11.28□□□□□ -0.6
PSD3-218ENST00000523619 FAM9AQ8IZU1 332 aaPredicted RBP11.08□□□□□ -0.64
PSD3-218ENST00000523619 YTHDC1Q96MU7 727 aaKnown RBP11.05□□□□□ -0.64
PSD3-218ENST00000523619 SHROOM4Q9ULL8 1493 aa11.02□□□□□ -0.64
PSD3-218ENST00000523619 APLP2Q06481 763 aa11.01□□□□□ -0.65
PSD3-218ENST00000523619 CCER1Q8TC90 406 aaPredicted RBP10.96□□□□□ -0.65
PSD3-218ENST00000523619 EHMT2Q96KQ7 1210 aa10.89□□□□□ -0.67
PSD3-218ENST00000523619 TTBK1Q5TCY1 1321 aaPredicted RBP10.83□□□□□ -0.68
PSD3-218ENST00000523619 ERICH6Q7L0X2 663 aa10.8□□□□□ -0.68
PSD3-218ENST00000523619 ATP1B4Q9UN42 357 aaPredicted RBP10.57□□□□□ -0.72
PSD3-218ENST00000523619 RANGAP1P46060 587 aaPredicted RBP10.53□□□□□ -0.72
PSD3-218ENST00000523619 TRIM41Q8WV44 630 aa10.53□□□□□ -0.72
PSD3-218ENST00000523619 UBTFP17480 764 aaKnown RBP10.48□□□□□ -0.73
PSD3-218ENST00000523619 PCGF6Q9BYE7 350 aa10.44□□□□□ -0.74
PSD3-218ENST00000523619 ZEB1P37275 1124 aaPredicted RBP10.39□□□□□ -0.75
PSD3-218ENST00000523619 CENPBP07199 599 aaPredicted RBP10.34□□□□□ -0.75
PSD3-218ENST00000523619 MYT1LQ9UL68 1186 aa10.32□□□□□ -0.76
PSD3-218ENST00000523619 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.28□□□□□ -0.76
PSD3-218ENST00000523619 HNRNPUL2Q1KMD3 747 aaKnown RBP10.28□□□□□ -0.76
PSD3-218ENST00000523619 NEFLP07196 543 aa10.24□□□□□ -0.77
PSD3-218ENST00000523619 DAXXQ9UER7 740 aaPredicted RBP10.21□□□□□ -0.77
PSD3-218ENST00000523619 CLSPNQ9HAW4 1339 aa10.17□□□□□ -0.78
PSD3-218ENST00000523619 GLIPR1L2Q4G1C9 344 aa10.12□□□□□ -0.79
PSD3-218ENST00000523619 ITGAEP38570 1179 aa10.07□□□□□ -0.8
PSD3-218ENST00000523619 POLR3GLQ9BT43 218 aa10.05□□□□□ -0.8
PSD3-218ENST00000523619 PPARGC1BQ86YN6 1023 aaKnown RBP10.02□□□□□ -0.81
PSD3-218ENST00000523619 CHIC1Q5VXU3 224 aa10.01□□□□□ -0.81
PSD3-218ENST00000523619 TRIM26Q12899 539 aaPredicted RBP10.01□□□□□ -0.81
PSD3-218ENST00000523619 SLC4A1APQ9BWU0 796 aaKnown RBP9.98□□□□□ -0.81
PSD3-218ENST00000523619 RTL5Q5HYW3 569 aaPredicted RBP9.93□□□□□ -0.82
PSD3-218ENST00000523619 ABCC9O60706 1549 aa9.93□□□□□ -0.82
PSD3-218ENST00000523619 PABPN1Q86U42 306 aaKnown RBP eCLIP9.92□□□□□ -0.82
PSD3-218ENST00000523619 FBLN2P98095 1184 aa9.87□□□□□ -0.83
PSD3-218ENST00000523619 FAM50AQ14320 339 aaKnown RBP9.86□□□□□ -0.83
PSD3-218ENST00000523619 CNGB1Q14028 1251 aaPredicted RBP9.86□□□□□ -0.83
PSD3-218ENST00000523619 TRIM52Q96A61 297 aa9.85□□□□□ -0.83
PSD3-218ENST00000523619 ZNF316A6NFI3 1004 aaPredicted RBP9.82□□□□□ -0.84
PSD3-218ENST00000523619 LOC105371045A0A1W2PR82 267 aa9.81□□□□□ -0.84
PSD3-218ENST00000523619 HRCP23327 699 aa9.78□□□□□ -0.84
PSD3-218ENST00000523619 BCANQ96GW7 911 aa9.75□□□□□ -0.85
PSD3-218ENST00000523619 ESF1Q9H501 851 aaKnown RBP9.74□□□□□ -0.85
PSD3-218ENST00000523619 ZBTB47Q9UFB7 747 aaPredicted RBP9.74□□□□□ -0.85
PSD3-218ENST00000523619 CDK11AQ9UQ88 783 aaPredicted RBP9.73□□□□□ -0.85
PSD3-218ENST00000523619 NEFMP07197 916 aa9.73□□□□□ -0.85
PSD3-218ENST00000523619 ZNF326Q5BKZ1 582 aaKnown RBP9.71□□□□□ -0.86
PSD3-218ENST00000523619 NPM1P06748 294 aaKnown RBP eCLIP9.69□□□□□ -0.86
PSD3-218ENST00000523619 NEUROD1Q13562 356 aa9.69□□□□□ -0.86
PSD3-218ENST00000523619 SLC24A1O60721 1099 aa9.66□□□□□ -0.86
PSD3-218ENST00000523619 TNNT2P45379 298 aaPredicted RBP9.65□□□□□ -0.86
PSD3-218ENST00000523619 ANP32BQ92688 251 aaKnown RBP9.64□□□□□ -0.87
PSD3-218ENST00000523619 ANP32CO43423 234 aa9.63□□□□□ -0.87
PSD3-218ENST00000523619 DIEXFQ68CQ4 756 aaKnown RBP9.62□□□□□ -0.87
PSD3-218ENST00000523619 ZNF777Q9ULD5 760 aaPredicted RBP9.61□□□□□ -0.87
PSD3-218ENST00000523619 STAG3Q9UJ98 1225 aa9.61□□□□□ -0.87
PSD3-218ENST00000523619 P3H3Q8IVL6 736 aa9.6□□□□□ -0.87
PSD3-218ENST00000523619 CSRNP3Q8WYN3 585 aa9.6□□□□□ -0.87
PSD3-218ENST00000523619 ARID3CA6NKF2 412 aa9.59□□□□□ -0.87
PSD3-218ENST00000523619 CANXP27824 592 aaKnown RBP9.59□□□□□ -0.87
PSD3-218ENST00000523619 CHGAP10645 457 aaKnown RBP9.53□□□□□ -0.88
PSD3-218ENST00000523619 NCLP19338 710 aaKnown RBP9.52□□□□□ -0.89
PSD3-218ENST00000523619 TRIM44Q96DX7 344 aaPredicted RBP9.51□□□□□ -0.89
PSD3-218ENST00000523619 PLPPR3Q6T4P5 718 aa9.48□□□□□ -0.89
PSD3-218ENST00000523619 SCRIBQ14160 1630 aa9.48□□□□□ -0.89
PSD3-218ENST00000523619 BCL11AQ9H165 835 aa9.47□□□□□ -0.89
PSD3-218ENST00000523619 CDK11BP21127 795 aaKnown RBP9.47□□□□□ -0.89
PSD3-218ENST00000523619 TSPY4P0CV99 314 aa9.46□□□□□ -0.89
PSD3-218ENST00000523619 TSPY10P0CW01 314 aa9.46□□□□□ -0.89
PSD3-218ENST00000523619 CHMP7Q8WUX9 453 aaPredicted RBP9.46□□□□□ -0.9
PSD3-218ENST00000523619 TONSLQ96HA7 1378 aa9.43□□□□□ -0.9
PSD3-218ENST00000523619 EIF5BO60841 1220 aaKnown RBP9.42□□□□□ -0.9
PSD3-218ENST00000523619 CALRP27797 417 aaKnown RBP9.42□□□□□ -0.9
PSD3-218ENST00000523619 NPM2Q86SE8 214 aaKnown RBP9.39□□□□□ -0.91
PSD3-218ENST00000523619 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.39□□□□□ -0.913e-6■■■■□ 22.2
PSD3-218ENST00000523619 MTUS2Q5JR59 1369 aa9.36□□□□□ -0.91
PSD3-218ENST00000523619 SCAF1Q9H7N4 1312 aaKnown RBP9.35□□□□□ -0.91
PSD3-218ENST00000523619 ACIN1Q9UKV3 1341 aaKnown RBP9.35□□□□□ -0.91
PSD3-218ENST00000523619 PPP1R15AO75807 674 aaPredicted RBP9.34□□□□□ -0.91
PSD3-218ENST00000523619 UPF2Q9HAU5 1272 aaKnown RBP9.34□□□□□ -0.91
PSD3-218ENST00000523619 HSP90AA1P07900 732 aaKnown RBP9.33□□□□□ -0.92
PSD3-218ENST00000523619 ANP32AP39687 249 aaKnown RBP9.33□□□□□ -0.92
PSD3-218ENST00000523619 CHIC2Q9UKJ5 165 aa9.33□□□□□ -0.92
PSD3-218ENST00000523619 PLEKHD1A6NEE1 506 aa9.33□□□□□ -0.92
PSD3-218ENST00000523619 PTMSP20962 102 aa9.32□□□□□ -0.92
PSD3-218ENST00000523619 C14orf37Q86TY3 774 aa9.32□□□□□ -0.92
PSD3-218ENST00000523619 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.31□□□□□ -0.92
PSD3-218ENST00000523619 TMC1Q8TDI8 760 aa9.3□□□□□ -0.92
PSD3-218ENST00000523619 A0A0G2JS52 829 aa9.3□□□□□ -0.92
PSD3-218ENST00000523619 WDR43Q15061 677 aaKnown RBP eCLIP9.3□□□□□ -0.92
PSD3-218ENST00000523619 KCNH8Q96L42 1107 aa9.29□□□□□ -0.92
PSD3-218ENST00000523619 ARID4BQ4LE39 1312 aaPredicted RBP9.29□□□□□ -0.92
PSD3-218ENST00000523619 RB1CC1Q8TDY2 1594 aa9.28□□□□□ -0.92
PSD3-218ENST00000523619 KDM2AQ9Y2K7 1162 aa9.27□□□□□ -0.93
PSD3-218ENST00000523619 HAP1P54257 671 aaPredicted RBP9.27□□□□□ -0.93
PSD3-218ENST00000523619 RSF1Q96T23 1441 aaPredicted RBP9.27□□□□□ -0.93
PSD3-218ENST00000523619 ZCCHC6Q5VYS8 1495 aaKnown RBP9.27□□□□□ -0.93
PSD3-218ENST00000523619 GTF3C3Q9Y5Q9 886 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms