RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 DNAH11Q96DT5 4516 aa3.98□□□□□ -1.77
PCM1-212ENST00000519253 DNAH5Q8TE73 4624 aa3.93□□□□□ -1.78
PCM1-212ENST00000519253 MT1HL1P0DM35 61 aa3.92□□□□□ -1.78
PCM1-212ENST00000519253 DNAH2Q9P225 4427 aa3.91□□□□□ -1.78
PCM1-212ENST00000519253 LRP1BQ9NZR2 4599 aa3.91□□□□□ -1.78
PCM1-212ENST00000519253 DNAH3Q8TD57 4116 aa3.91□□□□□ -1.78
PCM1-212ENST00000519253 STARD9Q9P2P6 4700 aa3.88□□□□□ -1.79
PCM1-212ENST00000519253 KRTAP23-1A1A580 65 aa3.83□□□□□ -1.8
PCM1-212ENST00000519253 SACSQ9NZJ4 4579 aa3.82□□□□□ -1.8
PCM1-212ENST00000519253 DYNC2H1Q8NCM8 4307 aaKnown RBP3.81□□□□□ -1.8
PCM1-212ENST00000519253 DYNC1H1Q14204 4646 aaKnown RBP3.8□□□□□ -1.8
PCM1-212ENST00000519253 ANK2Q01484 3957 aa3.77□□□□□ -1.81
PCM1-212ENST00000519253 KRTAP10-10P60014 251 aa3.76□□□□□ -1.81
PCM1-212ENST00000519253 LORP23490 312 aaPredicted RBP3.76□□□□□ -1.81
PCM1-212ENST00000519253 FAT1Q14517 4588 aa3.76□□□□□ -1.81
PCM1-212ENST00000519253 INE1O15225 51 aa3.72□□□□□ -1.81
PCM1-212ENST00000519253 HECTD4Q9Y4D8 3996 aa3.71□□□□□ -1.81
PCM1-212ENST00000519253 PRO2289Q9P1D8 64 aa3.7□□□□□ -1.82
PCM1-212ENST00000519253 CMYA5Q8N3K9 4069 aa3.69□□□□□ -1.82
PCM1-212ENST00000519253 KMT2AQ03164 3969 aa3.69□□□□□ -1.82
PCM1-212ENST00000519253 FRAS1Q86XX4 4008 aa3.68□□□□□ -1.82
PCM1-212ENST00000519253 DNHD1Q96M86 4753 aa3.68□□□□□ -1.82
PCM1-212ENST00000519253 VPS13BQ7Z7G8 4022 aa3.68□□□□□ -1.82
PCM1-212ENST00000519253 PRKDCP78527 4128 aaKnown RBP3.68□□□□□ -1.82
PCM1-212ENST00000519253 LYSTQ99698 3801 aa3.65□□□□□ -1.83
PCM1-212ENST00000519253 APOBP04114 4563 aaKnown RBP3.64□□□□□ -1.83
PCM1-212ENST00000519253 FAT2Q9NYQ8 4349 aa3.62□□□□□ -1.83
PCM1-212ENST00000519253 DNAH7Q8WXX0 4024 aa3.62□□□□□ -1.83
PCM1-212ENST00000519253 DNAH6Q9C0G6 4158 aa3.61□□□□□ -1.83
PCM1-212ENST00000519253 MYCBP2O75592 4640 aa3.59□□□□□ -1.83
PCM1-212ENST00000519253 KRTAP4-5Q9BYR2 181 aa3.57□□□□□ -1.84
PCM1-212ENST00000519253 FAT3Q8TDW7 4589 aa3.57□□□□□ -1.84
PCM1-212ENST00000519253 LCE3AQ5TA76 89 aa3.56□□□□□ -1.84
PCM1-212ENST00000519253 KRTAP4-1Q9BYQ7 146 aa3.56□□□□□ -1.84
PCM1-212ENST00000519253 KRTAP12-3P60328 96 aa3.53□□□□□ -1.84
PCM1-212ENST00000519253 KRTAP10-12P60413 245 aa3.53□□□□□ -1.84
PCM1-212ENST00000519253 RYR1P21817 5038 aa3.53□□□□□ -1.84
PCM1-212ENST00000519253 KIAA1109Q2LD37 5005 aa3.49□□□□□ -1.85
PCM1-212ENST00000519253 LRP1Q07954 4544 aaKnown RBP3.49□□□□□ -1.85
PCM1-212ENST00000519253 HYDINQ4G0P3 5121 aa3.48□□□□□ -1.85
PCM1-212ENST00000519253 SPRR2GQ9BYE4 73 aa3.47□□□□□ -1.85
PCM1-212ENST00000519253 RYR2Q92736 4967 aa3.47□□□□□ -1.85
PCM1-212ENST00000519253 SPRR5A0A1B0GTR4 108 aa3.47□□□□□ -1.85
PCM1-212ENST00000519253 PKD1P98161 4303 aa3.42□□□□□ -1.86
PCM1-212ENST00000519253 KRTAP8-1Q8IUC2 63 aa3.42□□□□□ -1.86
PCM1-212ENST00000519253 PKHD1L1Q86WI1 4243 aa3.4□□□□□ -1.86
PCM1-212ENST00000519253 RYR3Q15413 4870 aa3.4□□□□□ -1.87
PCM1-212ENST00000519253 KRTAP17-1Q9BYP8 105 aa3.4□□□□□ -1.87
PCM1-212ENST00000519253 LRP2P98164 4655 aa3.38□□□□□ -1.87
PCM1-212ENST00000519253 PKHD1P08F94 4074 aa3.37□□□□□ -1.87
PCM1-212ENST00000519253 MT2AP02795 61 aa3.32□□□□□ -1.88
PCM1-212ENST00000519253 KRTAP19-1Q8IUB9 90 aa3.32□□□□□ -1.88
PCM1-212ENST00000519253 KMT2CQ8NEZ4 4911 aaKnown RBP3.31□□□□□ -1.88
PCM1-212ENST00000519253 HSPG2P98160 4391 aa3.31□□□□□ -1.88
PCM1-212ENST00000519253 MT1HP80294 61 aa3.3□□□□□ -1.88
PCM1-212ENST00000519253 MT1FP04733 61 aa3.28□□□□□ -1.88
PCM1-212ENST00000519253 KRTAP19-2Q3LHN2 52 aa3.26□□□□□ -1.89
PCM1-212ENST00000519253 KRTAP19-8Q3LI54 63 aa3.26□□□□□ -1.89
PCM1-212ENST00000519253 TNXBP22105 4242 aa3.25□□□□□ -1.89
PCM1-212ENST00000519253 LCE3CQ5T5A8 94 aa3.2□□□□□ -1.9
PCM1-212ENST00000519253 MUC17Q685J3 4493 aa3.2□□□□□ -1.9
PCM1-212ENST00000519253 HERC2O95714 4834 aa3.18□□□□□ -1.9
PCM1-212ENST00000519253 KRTAP19-4Q3LI73 84 aa3.18□□□□□ -1.9
PCM1-212ENST00000519253 MT1XP80297 61 aa3.17□□□□□ -1.9
PCM1-212ENST00000519253 KRTAP19-5Q3LI72 72 aa3.17□□□□□ -1.9
PCM1-212ENST00000519253 HERC1Q15751 4861 aa3.16□□□□□ -1.9
PCM1-212ENST00000519253 KRTAP10-5P60370 271 aa3.16□□□□□ -1.9
PCM1-212ENST00000519253 LCE2CQ5TA81 110 aa3.15□□□□□ -1.9
PCM1-212ENST00000519253 MT1BP07438 61 aa3.14□□□□□ -1.91
PCM1-212ENST00000519253 KRTAP10-7P60409 375 aaPredicted RBP3.14□□□□□ -1.91
PCM1-212ENST00000519253 LPAP08519 4548 aa3.13□□□□□ -1.91
PCM1-212ENST00000519253 KRTAP9-8Q9BYQ0 159 aa3.11□□□□□ -1.91
PCM1-212ENST00000519253 FLGP20930 4061 aaPredicted RBP3.1□□□□□ -1.91
PCM1-212ENST00000519253 CRCT1Q9UGL9 99 aa3.04□□□□□ -1.92
PCM1-212ENST00000519253 EPPK1P58107 5090 aaKnown RBP3.04□□□□□ -1.92
PCM1-212ENST00000519253 ABCA13Q86UQ4 5058 aa3.04□□□□□ -1.92
PCM1-212ENST00000519253 BIRC6Q9NR09 4857 aa3.03□□□□□ -1.92
PCM1-212ENST00000519253 KRTAP9-3Q9BYQ3 159 aa3□□□□□ -1.93
PCM1-212ENST00000519253 MUC2Q02817 5179 aa2.97□□□□□ -1.93
PCM1-212ENST00000519253 PCLOQ9Y6V0 5065 aa2.97□□□□□ -1.93
PCM1-212ENST00000519253 RNF213Q63HN8 5207 aa2.93□□□□□ -1.94
PCM1-212ENST00000519253 KRTAP4-8A0A0G2JLE6 195 aa2.9□□□□□ -1.95
PCM1-212ENST00000519253 KRTAP4-8Q9BYQ9 185 aa2.9□□□□□ -1.95
PCM1-212ENST00000519253 FAT4Q6V0I7 4981 aa2.89□□□□□ -1.95
PCM1-212ENST00000519253 HMCN2Q8NDA2 5059 aa2.88□□□□□ -1.95
PCM1-212ENST00000519253 KRTAP12-4P60329 112 aa2.86□□□□□ -1.95
PCM1-212ENST00000519253 UBR4Q5T4S7 5183 aa2.83□□□□□ -1.96
PCM1-212ENST00000519253 MT1LQ93083 61 aa2.83□□□□□ -1.96
PCM1-212ENST00000519253 LCE2BO14633 110 aa2.82□□□□□ -1.96
PCM1-212ENST00000519253 KRTAP2-3P0C7H8 128 aa2.82□□□□□ -1.96
PCM1-212ENST00000519253 KRTAP2-4Q9BYR9 128 aa2.82□□□□□ -1.96
PCM1-212ENST00000519253 KRTAP2-1Q9BYU5 128 aa2.82□□□□□ -1.96
PCM1-212ENST00000519253 KRTAP4-7Q9BYR0 210 aa2.81□□□□□ -1.96
PCM1-212ENST00000519253 MT1EP04732 61 aa2.8□□□□□ -1.96
PCM1-212ENST00000519253 MT1GP13640 62 aa2.78□□□□□ -1.96
PCM1-212ENST00000519253 OBSCNQ5VST9 7968 aa2.78□□□□□ -1.96
PCM1-212ENST00000519253 KRTAP19-7Q3SYF9 63 aa2.76□□□□□ -1.97
PCM1-212ENST00000519253 KRTAP9-6A8MVA2 160 aa2.73□□□□□ -1.97
PCM1-212ENST00000519253 SPRR2FQ96RM1 72 aa2.73□□□□□ -1.97
PCM1-212ENST00000519253 SYNE1Q8NF91 8797 aaKnown RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms