RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 DNAH8Q96JB1 4490 aa4.02□□□□□ -1.77
CLK4-202ENST00000519132 Q96NJ1 140 aa4.01□□□□□ -1.77
CLK4-202ENST00000519132 A0A1B0GU33 70 aa4.01□□□□□ -1.77
CLK4-202ENST00000519132 KRTAP10-1P60331 282 aa4□□□□□ -1.77
CLK4-202ENST00000519132 KRTAP4-7Q9BYR0 210 aa3.99□□□□□ -1.77
CLK4-202ENST00000519132 RYR3Q15413 4870 aa3.98□□□□□ -1.77
CLK4-202ENST00000519132 Q6ZRX8 168 aa3.97□□□□□ -1.77
CLK4-202ENST00000519132 K7EQZ3 153 aa3.97□□□□□ -1.77
CLK4-202ENST00000519132 LINC00304Q8N9R0 145 aa3.97□□□□□ -1.77
CLK4-202ENST00000519132 PKHD1P08F94 4074 aa3.97□□□□□ -1.77
CLK4-202ENST00000519132 DYNC1H1Q14204 4646 aaKnown RBP3.95□□□□□ -1.78
CLK4-202ENST00000519132 KRTAP13-1Q8IUC0 172 aa3.95□□□□□ -1.78
CLK4-202ENST00000519132 LRP1BQ9NZR2 4599 aa3.94□□□□□ -1.78
CLK4-202ENST00000519132 PSORS1C2Q9UIG4 136 aa3.94□□□□□ -1.78
CLK4-202ENST00000519132 KRTAP10-12P60413 245 aa3.93□□□□□ -1.78
CLK4-202ENST00000519132 ANAPC11Q9NYG5 84 aa3.93□□□□□ -1.78
CLK4-202ENST00000519132 SSBP3-AS1Q7Z2R9 100 aa3.92□□□□□ -1.78
CLK4-202ENST00000519132 PRLHP81277 87 aa3.92□□□□□ -1.78
CLK4-202ENST00000519132 IGLV5-48A0A075B6I7 105 aa3.91□□□□□ -1.78
CLK4-202ENST00000519132 APOBP04114 4563 aaKnown RBP3.91□□□□□ -1.78
CLK4-202ENST00000519132 RPL37AP61513 92 aaKnown RBP3.9□□□□□ -1.79
CLK4-202ENST00000519132 PCOTHQ58A44 107 aa3.9□□□□□ -1.79
CLK4-202ENST00000519132 WFDC13Q8IUB5 93 aa3.9□□□□□ -1.79
CLK4-202ENST00000519132 SPRR1BP22528 89 aa3.89□□□□□ -1.79
CLK4-202ENST00000519132 KRTAP4-2Q9BYR5 136 aa3.89□□□□□ -1.79
CLK4-202ENST00000519132 KRTAP17-1Q9BYP8 105 aa3.88□□□□□ -1.79
CLK4-202ENST00000519132 ACYP2P14621 99 aa3.88□□□□□ -1.79
CLK4-202ENST00000519132 KRTAP4-5Q9BYR2 181 aa3.87□□□□□ -1.79
CLK4-202ENST00000519132 KRTAP10-4P60372 401 aaPredicted RBP3.86□□□□□ -1.79
CLK4-202ENST00000519132 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
CLK4-202ENST00000519132 VPS13BQ7Z7G8 4022 aa3.85□□□□□ -1.79
CLK4-202ENST00000519132 SPINK6Q6UWN8 80 aa3.85□□□□□ -1.79
CLK4-202ENST00000519132 DEFB105AQ8NG35 78 aa3.85□□□□□ -1.79
CLK4-202ENST00000519132 CRIPTQ9P021 101 aa3.85□□□□□ -1.79
CLK4-202ENST00000519132 PRO2289Q9P1D8 64 aa3.85□□□□□ -1.79
CLK4-202ENST00000519132 EPPK1P58107 5090 aaKnown RBP3.84□□□□□ -1.79
CLK4-202ENST00000519132 SMR3BP02814 79 aaPredicted RBP3.84□□□□□ -1.8
CLK4-202ENST00000519132 KRTAP10-6P60371 365 aaPredicted RBP3.84□□□□□ -1.8
CLK4-202ENST00000519132 HSPG2P98160 4391 aa3.83□□□□□ -1.8
CLK4-202ENST00000519132 SRRM2Q9UQ35 2752 aaKnown RBP3.82□□□□□ -1.8
CLK4-202ENST00000519132 RYR1P21817 5038 aa3.82□□□□□ -1.8
CLK4-202ENST00000519132 A0A0G2JQZ4 141 aa3.82□□□□□ -1.8
CLK4-202ENST00000519132 FAT1Q14517 4588 aa3.81□□□□□ -1.8
CLK4-202ENST00000519132 PKHD1L1Q86WI1 4243 aa3.81□□□□□ -1.8
CLK4-202ENST00000519132 TP53AIP1Q9HCN2 124 aa3.81□□□□□ -1.8
CLK4-202ENST00000519132 Q5VSD8 79 aa3.8□□□□□ -1.8
CLK4-202ENST00000519132 KIAA1109Q2LD37 5005 aa3.79□□□□□ -1.8
CLK4-202ENST00000519132 IGFL1Q6UW32 110 aa3.78□□□□□ -1.8
CLK4-202ENST00000519132 TPRXLQ17RH7 258 aa3.77□□□□□ -1.81
CLK4-202ENST00000519132 KRTAP13-2Q52LG2 175 aa3.76□□□□□ -1.81
CLK4-202ENST00000519132 BIRC6Q9NR09 4857 aa3.73□□□□□ -1.81
CLK4-202ENST00000519132 RPS29P62273 56 aaKnown RBP3.72□□□□□ -1.81
CLK4-202ENST00000519132 H0YAA0 97 aa3.71□□□□□ -1.82
CLK4-202ENST00000519132 KRTAP10-8P60410 259 aa3.7□□□□□ -1.82
CLK4-202ENST00000519132 SPINK1P00995 79 aa3.7□□□□□ -1.82
CLK4-202ENST00000519132 HERC2O95714 4834 aa3.68□□□□□ -1.82
CLK4-202ENST00000519132 MMP24-AS1A0A0U1RRL7 71 aa3.68□□□□□ -1.82
CLK4-202ENST00000519132 FAT3Q8TDW7 4589 aa3.68□□□□□ -1.82
CLK4-202ENST00000519132 TNXBP22105 4242 aa3.67□□□□□ -1.82
CLK4-202ENST00000519132 MT1HL1P0DM35 61 aa3.66□□□□□ -1.82
CLK4-202ENST00000519132 LRP1Q07954 4544 aaKnown RBP3.66□□□□□ -1.82
CLK4-202ENST00000519132 FLG2Q5D862 2391 aaPredicted RBP3.64□□□□□ -1.83
CLK4-202ENST00000519132 PLAC4Q8WY50 150 aa3.63□□□□□ -1.83
CLK4-202ENST00000519132 MYCBP2O75592 4640 aa3.62□□□□□ -1.83
CLK4-202ENST00000519132 ABCA13Q86UQ4 5058 aa3.61□□□□□ -1.83
CLK4-202ENST00000519132 MRPL34Q9BQ48 92 aaKnown RBP3.61□□□□□ -1.83
CLK4-202ENST00000519132 C10orf95Q9H7T3 257 aa3.6□□□□□ -1.83
CLK4-202ENST00000519132 INE1O15225 51 aa3.56□□□□□ -1.84
CLK4-202ENST00000519132 DMBT1Q9UGM3 2413 aaPredicted RBP3.55□□□□□ -1.84
CLK4-202ENST00000519132 PCLOQ9Y6V0 5065 aa3.54□□□□□ -1.84
CLK4-202ENST00000519132 H1FX-AS1Q4G0G2 97 aa3.53□□□□□ -1.84
CLK4-202ENST00000519132 KRTAP12-2P59991 146 aa3.53□□□□□ -1.85
CLK4-202ENST00000519132 KRTAP13-3Q3SY46 172 aa3.53□□□□□ -1.85
CLK4-202ENST00000519132 COX6B2Q6YFQ2 88 aa3.5□□□□□ -1.85
CLK4-202ENST00000519132 C9orf92A6NGG3 77 aa3.47□□□□□ -1.85
CLK4-202ENST00000519132 KRTAP10-5P60370 271 aa3.46□□□□□ -1.85
CLK4-202ENST00000519132 RPL37P61927 97 aaKnown RBP3.46□□□□□ -1.85
CLK4-202ENST00000519132 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
CLK4-202ENST00000519132 LCE3DQ9BYE3 92 aa3.42□□□□□ -1.86
CLK4-202ENST00000519132 HERC1Q15751 4861 aa3.4□□□□□ -1.87
CLK4-202ENST00000519132 LPAP08519 4548 aa3.4□□□□□ -1.87
CLK4-202ENST00000519132 HMCN2Q8NDA2 5059 aa3.39□□□□□ -1.87
CLK4-202ENST00000519132 LRP2P98164 4655 aa3.37□□□□□ -1.87
CLK4-202ENST00000519132 UBR4Q5T4S7 5183 aa3.36□□□□□ -1.87
CLK4-202ENST00000519132 MUC17Q685J3 4493 aa3.35□□□□□ -1.87
CLK4-202ENST00000519132 KRTAP5-3Q6L8H2 238 aa3.3□□□□□ -1.88
CLK4-202ENST00000519132 PP632Q6XCG6 107 aa3.3□□□□□ -1.88
CLK4-202ENST00000519132 SPRR5A0A1B0GTR4 108 aa3.29□□□□□ -1.88
CLK4-202ENST00000519132 KRTAP4-1Q9BYQ7 146 aa3.27□□□□□ -1.89
CLK4-202ENST00000519132 S4R3F8 94 aa3.26□□□□□ -1.89
CLK4-202ENST00000519132 KRTAP19-2Q3LHN2 52 aa3.21□□□□□ -1.9
CLK4-202ENST00000519132 A0A0D9SG42 100 aa3.2□□□□□ -1.9
CLK4-202ENST00000519132 RNF213Q63HN8 5207 aa3.19□□□□□ -1.9
CLK4-202ENST00000519132 MUC2Q02817 5179 aa3.19□□□□□ -1.9
CLK4-202ENST00000519132 KRTAP10-7P60409 375 aaPredicted RBP3.18□□□□□ -1.9
CLK4-202ENST00000519132 KRTAP12-1P59990 96 aa3.16□□□□□ -1.9
CLK4-202ENST00000519132 KRTAP13-4Q3LI77 160 aa3.15□□□□□ -1.91
CLK4-202ENST00000519132 KRTAP10-10P60014 251 aa3.14□□□□□ -1.91
CLK4-202ENST00000519132 KRTAP6-3Q3LI67 103 aa3.13□□□□□ -1.91
CLK4-202ENST00000519132 FLGP20930 4061 aaPredicted RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms