RNA–Protein interactions for RNA: ENST00000517570.5

MTCL1-205, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MTCL1, Length 6,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-205ENST00000517570 VPS13CQ709C8 3753 aa6.78□□□□□ -1.32
MTCL1-205ENST00000517570 CSMD2Q7Z408 3487 aa6.78□□□□□ -1.32
MTCL1-205ENST00000517570 KRTAP8-1Q8IUC2 63 aa6.73□□□□□ -1.33
MTCL1-205ENST00000517570 COL7A1Q02388 2944 aa6.64□□□□□ -1.35
MTCL1-205ENST00000517570 DNAH2Q9P225 4427 aa6.61□□□□□ -1.35
MTCL1-205ENST00000517570 DNAH1Q9P2D7 4330 aa6.61□□□□□ -1.35
MTCL1-205ENST00000517570 DNAH9Q9NYC9 4486 aa6.58□□□□□ -1.36
MTCL1-205ENST00000517570 CSMD3Q7Z407 3707 aa6.58□□□□□ -1.36
MTCL1-205ENST00000517570 KRTAP4-1Q9BYQ7 146 aa6.57□□□□□ -1.36
MTCL1-205ENST00000517570 DNAH10Q8IVF4 4471 aa6.52□□□□□ -1.37
MTCL1-205ENST00000517570 MT1HP80294 61 aa6.48□□□□□ -1.37
MTCL1-205ENST00000517570 DNAH3Q8TD57 4116 aa6.45□□□□□ -1.38
MTCL1-205ENST00000517570 DNAH11Q96DT5 4516 aa6.45□□□□□ -1.38
MTCL1-205ENST00000517570 DNAH5Q8TE73 4624 aa6.44□□□□□ -1.38
MTCL1-205ENST00000517570 KRTAP19-5Q3LI72 72 aa6.43□□□□□ -1.38
MTCL1-205ENST00000517570 DNAH8Q96JB1 4490 aa6.41□□□□□ -1.38
MTCL1-205ENST00000517570 SPRR2GQ9BYE4 73 aa6.4□□□□□ -1.39
MTCL1-205ENST00000517570 MT2AP02795 61 aa6.39□□□□□ -1.39
MTCL1-205ENST00000517570 DNAH17Q9UFH2 4485 aa6.39□□□□□ -1.39
MTCL1-205ENST00000517570 LCE3CQ5T5A8 94 aa6.38□□□□□ -1.39
MTCL1-205ENST00000517570 PLECQ15149 4684 aaKnown RBP6.32□□□□□ -1.4
MTCL1-205ENST00000517570 VPS13DQ5THJ4 4388 aa6.31□□□□□ -1.4
MTCL1-205ENST00000517570 MT1FP04733 61 aa6.28□□□□□ -1.4
MTCL1-205ENST00000517570 KRTAP10-7P60409 375 aaPredicted RBP6.22□□□□□ -1.41
MTCL1-205ENST00000517570 ANK2Q01484 3957 aa6.2□□□□□ -1.42
MTCL1-205ENST00000517570 SPRR2FQ96RM1 72 aa6.19□□□□□ -1.42
MTCL1-205ENST00000517570 SACSQ9NZJ4 4579 aa6.17□□□□□ -1.42
MTCL1-205ENST00000517570 FAT2Q9NYQ8 4349 aa6.15□□□□□ -1.42
MTCL1-205ENST00000517570 CMYA5Q8N3K9 4069 aa6.15□□□□□ -1.43
MTCL1-205ENST00000517570 ZNF469Q96JG9 3925 aaPredicted RBP6.14□□□□□ -1.43
MTCL1-205ENST00000517570 DYNC1H1Q14204 4646 aaKnown RBP6.13□□□□□ -1.43
MTCL1-205ENST00000517570 DYNC2H1Q8NCM8 4307 aaKnown RBP6.13□□□□□ -1.43
MTCL1-205ENST00000517570 KRTAP19-4Q3LI73 84 aa6.08□□□□□ -1.44
MTCL1-205ENST00000517570 LRP1BQ9NZR2 4599 aa6.07□□□□□ -1.44
MTCL1-205ENST00000517570 DNAH6Q9C0G6 4158 aa6.04□□□□□ -1.44
MTCL1-205ENST00000517570 STARD9Q9P2P6 4700 aa6.03□□□□□ -1.44
MTCL1-205ENST00000517570 FRAS1Q86XX4 4008 aa6.03□□□□□ -1.44
MTCL1-205ENST00000517570 DNAH7Q8WXX0 4024 aa6□□□□□ -1.45
MTCL1-205ENST00000517570 LCE3BQ5TA77 95 aa5.99□□□□□ -1.45
MTCL1-205ENST00000517570 FAT1Q14517 4588 aa5.99□□□□□ -1.45
MTCL1-205ENST00000517570 PRKDCP78527 4128 aaKnown RBP5.98□□□□□ -1.45
MTCL1-205ENST00000517570 VPS13BQ7Z7G8 4022 aa5.95□□□□□ -1.46
MTCL1-205ENST00000517570 KRTAP12-4P60329 112 aa5.88□□□□□ -1.47
MTCL1-205ENST00000517570 APOBP04114 4563 aaKnown RBP5.87□□□□□ -1.47
MTCL1-205ENST00000517570 MT1GP13640 62 aa5.87□□□□□ -1.47
MTCL1-205ENST00000517570 KMT2AQ03164 3969 aa5.87□□□□□ -1.47
MTCL1-205ENST00000517570 KRTAP19-8Q3LI54 63 aa5.87□□□□□ -1.47
MTCL1-205ENST00000517570 MT1XP80297 61 aa5.85□□□□□ -1.47
MTCL1-205ENST00000517570 KRTAP19-1Q8IUB9 90 aa5.84□□□□□ -1.47
MTCL1-205ENST00000517570 SPRR2EP22531 72 aa5.82□□□□□ -1.48
MTCL1-205ENST00000517570 SPRR2BP35325 72 aa5.82□□□□□ -1.48
MTCL1-205ENST00000517570 SPRR2AP35326 72 aa5.82□□□□□ -1.48
MTCL1-205ENST00000517570 DNHD1Q96M86 4753 aa5.78□□□□□ -1.48
MTCL1-205ENST00000517570 RYR1P21817 5038 aa5.78□□□□□ -1.48
MTCL1-205ENST00000517570 SPRR5A0A1B0GTR4 108 aa5.76□□□□□ -1.49
MTCL1-205ENST00000517570 MT1BP07438 61 aa5.68□□□□□ -1.5
MTCL1-205ENST00000517570 HECTD4Q9Y4D8 3996 aa5.67□□□□□ -1.5
MTCL1-205ENST00000517570 FAT3Q8TDW7 4589 aa5.66□□□□□ -1.5
MTCL1-205ENST00000517570 KRTAP4-8A0A0G2JLE6 195 aa5.65□□□□□ -1.5
MTCL1-205ENST00000517570 KRTAP4-8Q9BYQ9 185 aa5.65□□□□□ -1.5
MTCL1-205ENST00000517570 LYSTQ99698 3801 aa5.64□□□□□ -1.51
MTCL1-205ENST00000517570 LRP1Q07954 4544 aaKnown RBP5.63□□□□□ -1.51
MTCL1-205ENST00000517570 KRTAP17-1Q9BYP8 105 aa5.62□□□□□ -1.51
MTCL1-205ENST00000517570 HERC1Q15751 4861 aa5.62□□□□□ -1.51
MTCL1-205ENST00000517570 SPRR2DP22532 72 aa5.62□□□□□ -1.51
MTCL1-205ENST00000517570 RYR3Q15413 4870 aa5.62□□□□□ -1.51
MTCL1-205ENST00000517570 LCE3DQ9BYE3 92 aa5.61□□□□□ -1.51
MTCL1-205ENST00000517570 HSPG2P98160 4391 aa5.61□□□□□ -1.51
MTCL1-205ENST00000517570 LCE2BO14633 110 aa5.58□□□□□ -1.52
MTCL1-205ENST00000517570 RYR2Q92736 4967 aa5.57□□□□□ -1.52
MTCL1-205ENST00000517570 KRTAP9-8Q9BYQ0 159 aa5.55□□□□□ -1.52
MTCL1-205ENST00000517570 MYCBP2O75592 4640 aa5.52□□□□□ -1.53
MTCL1-205ENST00000517570 LCE3EQ5T5B0 92 aa5.51□□□□□ -1.53
MTCL1-205ENST00000517570 KRTAP4-7Q9BYR0 210 aa5.46□□□□□ -1.54
MTCL1-205ENST00000517570 KRTAP9-3Q9BYQ3 159 aa5.44□□□□□ -1.54
MTCL1-205ENST00000517570 LCE2CQ5TA81 110 aa5.41□□□□□ -1.54
MTCL1-205ENST00000517570 PKD1P98161 4303 aa5.41□□□□□ -1.54
MTCL1-205ENST00000517570 MT1LQ93083 61 aa5.33□□□□□ -1.56
MTCL1-205ENST00000517570 KIAA1109Q2LD37 5005 aa5.33□□□□□ -1.56
MTCL1-205ENST00000517570 KRTAP19-3Q7Z4W3 81 aa5.31□□□□□ -1.56
MTCL1-205ENST00000517570 PRM1P04553 51 aa5.28□□□□□ -1.56
MTCL1-205ENST00000517570 LPAP08519 4548 aa5.28□□□□□ -1.56
MTCL1-205ENST00000517570 PKHD1L1Q86WI1 4243 aa5.27□□□□□ -1.57
MTCL1-205ENST00000517570 MT1EP04732 61 aa5.25□□□□□ -1.57
MTCL1-205ENST00000517570 LOC100996750A0A140TA64 210 aa5.2□□□□□ -1.58
MTCL1-205ENST00000517570 TNXBP22105 4242 aa5.19□□□□□ -1.58
MTCL1-205ENST00000517570 KRTAP19-2Q3LHN2 52 aa5.18□□□□□ -1.58
MTCL1-205ENST00000517570 MUC17Q685J3 4493 aa5.11□□□□□ -1.59
MTCL1-205ENST00000517570 PKHD1P08F94 4074 aa5.11□□□□□ -1.59
MTCL1-205ENST00000517570 LCE2DQ5TA82 110 aaPredicted RBP5.11□□□□□ -1.59
MTCL1-205ENST00000517570 MT1MQ8N339 61 aa5.1□□□□□ -1.59
MTCL1-205ENST00000517570 LRP2P98164 4655 aa5.08□□□□□ -1.6
MTCL1-205ENST00000517570 KRTAP4-3Q9BYR4 195 aa5.07□□□□□ -1.6
MTCL1-205ENST00000517570 HYDINQ4G0P3 5121 aa5.07□□□□□ -1.6
MTCL1-205ENST00000517570 HERC2O95714 4834 aa5.07□□□□□ -1.6
MTCL1-205ENST00000517570 BIRC6Q9NR09 4857 aa5.06□□□□□ -1.6
MTCL1-205ENST00000517570 MT3P25713 68 aa5.05□□□□□ -1.6
MTCL1-205ENST00000517570 MT4P47944 62 aa5.02□□□□□ -1.61
MTCL1-205ENST00000517570 FLGP20930 4061 aaPredicted RBP4.97□□□□□ -1.61
MTCL1-205ENST00000517570 PCLOQ9Y6V0 5065 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms