RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 CELSR3Q9NYQ7 3312 aa-0.13□□□□□ -2.43
SCARNA3-201ENST00000517097 DNAH3Q8TD57 4116 aa-0.14□□□□□ -2.43
SCARNA3-201ENST00000517097 LAMA1P25391 3075 aa-0.14□□□□□ -2.43
SCARNA3-201ENST00000517097 USP9XQ93008 2570 aaPredicted RBP-0.14□□□□□ -2.43
SCARNA3-201ENST00000517097 SPART-AS1P0CW21 52 aa-0.14□□□□□ -2.43
SCARNA3-201ENST00000517097 SSPOA2VEC9 5147 aa-0.14□□□□□ -2.43
SCARNA3-201ENST00000517097 HTTP42858 3142 aa-0.14□□□□□ -2.43
SCARNA3-201ENST00000517097 MROH2BQ7Z745 1585 aa-0.15□□□□□ -2.43
SCARNA3-201ENST00000517097 RANBP2P49792 3224 aaKnown RBP-0.15□□□□□ -2.43
SCARNA3-201ENST00000517097 DEFB1P60022 68 aa-0.15□□□□□ -2.43
SCARNA3-201ENST00000517097 KRTAP19-8Q3LI54 63 aa-0.15□□□□□ -2.43
SCARNA3-201ENST00000517097 GCC2Q8IWJ2 1684 aa-0.15□□□□□ -2.43
SCARNA3-201ENST00000517097 AKAP9Q99996 3911 aa-0.15□□□□□ -2.43
SCARNA3-201ENST00000517097 SPENQ96T58 3664 aaKnown RBP-0.16□□□□□ -2.44
SCARNA3-201ENST00000517097 DNAH9Q9NYC9 4486 aa-0.17□□□□□ -2.44
SCARNA3-201ENST00000517097 FAT3Q8TDW7 4589 aa-0.17□□□□□ -2.44
SCARNA3-201ENST00000517097 DUOX1Q9NRD9 1551 aa-0.18□□□□□ -2.44
SCARNA3-201ENST00000517097 MT1HP80294 61 aa-0.18□□□□□ -2.44
SCARNA3-201ENST00000517097 FRYQ5TBA9 3013 aa-0.18□□□□□ -2.44
SCARNA3-201ENST00000517097 TRIOO75962 3097 aa-0.19□□□□□ -2.44
SCARNA3-201ENST00000517097 PCLOQ9Y6V0 5065 aa-0.2□□□□□ -2.44
SCARNA3-201ENST00000517097 DNAH2Q9P225 4427 aa-0.2□□□□□ -2.44
SCARNA3-201ENST00000517097 SPTAN1Q13813 2472 aaKnown RBP-0.21□□□□□ -2.44
SCARNA3-201ENST00000517097 USP9YO00507 2555 aaPredicted RBP-0.21□□□□□ -2.44
SCARNA3-201ENST00000517097 DNAH11Q96DT5 4516 aa-0.21□□□□□ -2.44
SCARNA3-201ENST00000517097 RPL39P62891 51 aaKnown RBP-0.21□□□□□ -2.44
SCARNA3-201ENST00000517097 DNAH6Q9C0G6 4158 aa-0.22□□□□□ -2.44
SCARNA3-201ENST00000517097 GPR98Q8WXG9 6306 aa-0.22□□□□□ -2.44
SCARNA3-201ENST00000517097 NBPF19A0A087WUL8 3843 aa-0.22□□□□□ -2.44
SCARNA3-201ENST00000517097 FSIP2Q5CZC0 6907 aa-0.22□□□□□ -2.44
SCARNA3-201ENST00000517097 MUC2Q02817 5179 aa-0.22□□□□□ -2.44
SCARNA3-201ENST00000517097 APOBP04114 4563 aaKnown RBP-0.22□□□□□ -2.45
SCARNA3-201ENST00000517097 FAT1Q14517 4588 aa-0.23□□□□□ -2.45
SCARNA3-201ENST00000517097 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.23□□□□□ -2.45
SCARNA3-201ENST00000517097 CHD7Q9P2D1 2997 aa-0.23□□□□□ -2.45
SCARNA3-201ENST00000517097 SYNE2Q8WXH0 6885 aaKnown RBP-0.23□□□□□ -2.45
SCARNA3-201ENST00000517097 SPTBN5Q9NRC6 3674 aaKnown RBP-0.25□□□□□ -2.45
SCARNA3-201ENST00000517097 LEAP2Q969E1 77 aa-0.25□□□□□ -2.45
SCARNA3-201ENST00000517097 TOMM7Q9P0U1 55 aa-0.25□□□□□ -2.45
SCARNA3-201ENST00000517097 DNAH7Q8WXX0 4024 aa-0.25□□□□□ -2.45
SCARNA3-201ENST00000517097 WDR87Q6ZQQ6 2873 aa-0.25□□□□□ -2.45
SCARNA3-201ENST00000517097 ITPR3Q14573 2671 aa-0.26□□□□□ -2.45
SCARNA3-201ENST00000517097 RPL39LQ96EH5 51 aaKnown RBP-0.26□□□□□ -2.45
SCARNA3-201ENST00000517097 DOPEY1Q5JWR5 2465 aa-0.26□□□□□ -2.45
SCARNA3-201ENST00000517097 ITPR1Q14643 2758 aa-0.27□□□□□ -2.45
SCARNA3-201ENST00000517097 HERC1Q15751 4861 aa-0.27□□□□□ -2.45
SCARNA3-201ENST00000517097 ADGRG4Q8IZF6 3080 aa-0.27□□□□□ -2.45
SCARNA3-201ENST00000517097 DNAH1Q9P2D7 4330 aa-0.27□□□□□ -2.45
SCARNA3-201ENST00000517097 VPS13DQ5THJ4 4388 aa-0.28□□□□□ -2.45
SCARNA3-201ENST00000517097 MT1EP04732 61 aa-0.28□□□□□ -2.45
SCARNA3-201ENST00000517097 SNRPGP62308 76 aaKnown RBP-0.28□□□□□ -2.45
SCARNA3-201ENST00000517097 KRTAP20-2Q3LI61 65 aa-0.28□□□□□ -2.45
SCARNA3-201ENST00000517097 C5orf42Q9H799 3197 aa-0.29□□□□□ -2.46
SCARNA3-201ENST00000517097 MGAQ8IWI9 3026 aa-0.3□□□□□ -2.46
SCARNA3-201ENST00000517097 MUC12Q9UKN1 5478 aa-0.3□□□□□ -2.46
SCARNA3-201ENST00000517097 SRCAPQ6ZRS2 3230 aa-0.3□□□□□ -2.46
SCARNA3-201ENST00000517097 MT4P47944 62 aa-0.3□□□□□ -2.46
SCARNA3-201ENST00000517097 ZFHX4Q86UP3 3567 aa-0.31□□□□□ -2.46
SCARNA3-201ENST00000517097 STARD9Q9P2P6 4700 aa-0.31□□□□□ -2.46
SCARNA3-201ENST00000517097 MT1XP80297 61 aa-0.31□□□□□ -2.46
SCARNA3-201ENST00000517097 LAMA3Q16787 3333 aa-0.31□□□□□ -2.46
SCARNA3-201ENST00000517097 DNAH8Q96JB1 4490 aa-0.32□□□□□ -2.46
SCARNA3-201ENST00000517097 KMT2CQ8NEZ4 4911 aaKnown RBP-0.32□□□□□ -2.46
SCARNA3-201ENST00000517097 RELNP78509 3460 aa-0.32□□□□□ -2.46
SCARNA3-201ENST00000517097 MT1LQ93083 61 aa-0.32□□□□□ -2.46
SCARNA3-201ENST00000517097 LINC01590Q5TEZ4 76 aa-0.33□□□□□ -2.46
SCARNA3-201ENST00000517097 CRYBG3Q68DQ2 2970 aa-0.33□□□□□ -2.46
SCARNA3-201ENST00000517097 DSTQ03001 7570 aaKnown RBP-0.34□□□□□ -2.46
SCARNA3-201ENST00000517097 MACF1Q9UPN3 7388 aaKnown RBP-0.34□□□□□ -2.46
SCARNA3-201ENST00000517097 CSMD1Q96PZ7 3565 aa-0.34□□□□□ -2.46
SCARNA3-201ENST00000517097 MYO9AB2RTY4 2548 aa-0.34□□□□□ -2.46
SCARNA3-201ENST00000517097 TEX15Q9BXT5 2789 aa-0.35□□□□□ -2.47
SCARNA3-201ENST00000517097 DEFB136Q30KP8 78 aa-0.35□□□□□ -2.47
SCARNA3-201ENST00000517097 MUC17Q685J3 4493 aa-0.35□□□□□ -2.47
SCARNA3-201ENST00000517097 LRBAP50851 2863 aa-0.35□□□□□ -2.47
SCARNA3-201ENST00000517097 PLECQ15149 4684 aaKnown RBP-0.36□□□□□ -2.47
SCARNA3-201ENST00000517097 TLN1Q9Y490 2541 aaKnown RBP-0.36□□□□□ -2.47
SCARNA3-201ENST00000517097 UBR4Q5T4S7 5183 aa-0.38□□□□□ -2.47
SCARNA3-201ENST00000517097 DMXL2Q8TDJ6 3036 aa-0.38□□□□□ -2.47
SCARNA3-201ENST00000517097 CFAP46Q8IYW2 2715 aa-0.38□□□□□ -2.47
SCARNA3-201ENST00000517097 CMYA5Q8N3K9 4069 aa-0.38□□□□□ -2.47
SCARNA3-201ENST00000517097 DNAH10Q8IVF4 4471 aa-0.39□□□□□ -2.47
SCARNA3-201ENST00000517097 LAMA2P24043 3122 aaKnown RBP-0.41□□□□□ -2.47
SCARNA3-201ENST00000517097 CEP250Q9BV73 2442 aa-0.41□□□□□ -2.48
SCARNA3-201ENST00000517097 DEFB4AO15263 64 aa-0.42□□□□□ -2.48
SCARNA3-201ENST00000517097 DEFB104AQ8WTQ1 72 aa-0.42□□□□□ -2.48
SCARNA3-201ENST00000517097 DYNC1H1Q14204 4646 aaKnown RBP-0.42□□□□□ -2.48
SCARNA3-201ENST00000517097 NIPBLQ6KC79 2804 aaeCLIP-0.43□□□□□ -2.48
SCARNA3-201ENST00000517097 RHPN1-AS1Q9BWJ2 59 aa-0.43□□□□□ -2.48
SCARNA3-201ENST00000517097 RYR1P21817 5038 aa-0.43□□□□□ -2.48
SCARNA3-201ENST00000517097 TRRAPQ9Y4A5 3859 aa-0.44□□□□□ -2.48
SCARNA3-201ENST00000517097 DNAH17Q9UFH2 4485 aa-0.44□□□□□ -2.48
SCARNA3-201ENST00000517097 EYSQ5T1H1 3165 aa-0.45□□□□□ -2.48
SCARNA3-201ENST00000517097 USH2AO75445 5202 aa-0.45□□□□□ -2.48
SCARNA3-201ENST00000517097 MT1GP13640 62 aa-0.45□□□□□ -2.48
SCARNA3-201ENST00000517097 ARHGAP5-AS1Q96IT6 56 aa-0.47□□□□□ -2.48
SCARNA3-201ENST00000517097 CFAP54Q96N23 3096 aa-0.48□□□□□ -2.49
SCARNA3-201ENST00000517097 HERC2O95714 4834 aa-0.49□□□□□ -2.49
SCARNA3-201ENST00000517097 A0A096LNI7 61 aa-0.49□□□□□ -2.49
SCARNA3-201ENST00000517097 MT1HL1P0DM35 61 aa-0.49□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms