RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 SPENQ96T58 3664 aaKnown RBP1.32□□□□□ -2.2
NIPBL-207ENST00000513819 HRNRQ86YZ3 2850 aaPredicted RBP1.32□□□□□ -2.2
NIPBL-207ENST00000513819 DNAH2Q9P225 4427 aa1.32□□□□□ -2.2
NIPBL-207ENST00000513819 HECTD1Q9ULT8 2610 aa1.32□□□□□ -2.2
NIPBL-207ENST00000513819 ANK2Q01484 3957 aa1.31□□□□□ -2.2
NIPBL-207ENST00000513819 HUWE1Q7Z6Z7 4374 aaKnown RBP1.31□□□□□ -2.2
NIPBL-207ENST00000513819 CFAP46Q8IYW2 2715 aa1.31□□□□□ -2.2
NIPBL-207ENST00000513819 KRTAP10-4P60372 401 aaPredicted RBP1.31□□□□□ -2.2
NIPBL-207ENST00000513819 KRTAP8-1Q8IUC2 63 aa1.31□□□□□ -2.2
NIPBL-207ENST00000513819 LRRK2Q5S007 2527 aa1.31□□□□□ -2.2
NIPBL-207ENST00000513819 VCANP13611 3396 aa1.31□□□□□ -2.2
NIPBL-207ENST00000513819 GCN1Q92616 2671 aaKnown RBP1.31□□□□□ -2.2
NIPBL-207ENST00000513819 CSMD1Q96PZ7 3565 aa1.31□□□□□ -2.2
NIPBL-207ENST00000513819 COL7A1Q02388 2944 aa1.3□□□□□ -2.2
NIPBL-207ENST00000513819 USP9YO00507 2555 aaPredicted RBP1.3□□□□□ -2.2
NIPBL-207ENST00000513819 APOBP04114 4563 aaKnown RBP1.29□□□□□ -2.2
NIPBL-207ENST00000513819 ASPMQ8IZT6 3477 aa1.29□□□□□ -2.2
NIPBL-207ENST00000513819 CRCT1Q9UGL9 99 aa1.29□□□□□ -2.2
NIPBL-207ENST00000513819 TRRAPQ9Y4A5 3859 aa1.29□□□□□ -2.2
NIPBL-207ENST00000513819 TGP01266 2768 aa1.29□□□□□ -2.2
NIPBL-207ENST00000513819 BSNQ9UPA5 3926 aa1.29□□□□□ -2.2
NIPBL-207ENST00000513819 DNAH17Q9UFH2 4485 aa1.28□□□□□ -2.2
NIPBL-207ENST00000513819 ACANP16112 2415 aa1.28□□□□□ -2.2
NIPBL-207ENST00000513819 CMYA5Q8N3K9 4069 aa1.28□□□□□ -2.2
NIPBL-207ENST00000513819 CACNA1AO00555 2505 aa1.28□□□□□ -2.2
NIPBL-207ENST00000513819 MTORP42345 2549 aa1.28□□□□□ -2.2
NIPBL-207ENST00000513819 CHD8Q9HCK8 2581 aa1.28□□□□□ -2.2
NIPBL-207ENST00000513819 DYNC2H1Q8NCM8 4307 aaKnown RBP1.28□□□□□ -2.2
NIPBL-207ENST00000513819 BRCA2P51587 3418 aa1.28□□□□□ -2.2
NIPBL-207ENST00000513819 NBEAL1Q6ZS30 2694 aa1.28□□□□□ -2.2
NIPBL-207ENST00000513819 KMT2AQ03164 3969 aa1.28□□□□□ -2.21
NIPBL-207ENST00000513819 DNAH9Q9NYC9 4486 aa1.28□□□□□ -2.21
NIPBL-207ENST00000513819 CSMD3Q7Z407 3707 aa1.27□□□□□ -2.21
NIPBL-207ENST00000513819 TENM4Q6N022 2769 aa1.27□□□□□ -2.21
NIPBL-207ENST00000513819 ZNF292O60281 2723 aa1.27□□□□□ -2.21
NIPBL-207ENST00000513819 PIEZO1Q92508 2521 aa1.27□□□□□ -2.21
NIPBL-207ENST00000513819 M0R2T5 61 aa1.27□□□□□ -2.21
NIPBL-207ENST00000513819 EPG5Q9HCE0 2579 aa1.27□□□□□ -2.21
NIPBL-207ENST00000513819 ADGRG4Q8IZF6 3080 aa1.26□□□□□ -2.21
NIPBL-207ENST00000513819 DNAH3Q8TD57 4116 aa1.26□□□□□ -2.21
NIPBL-207ENST00000513819 VPS13BQ7Z7G8 4022 aa1.26□□□□□ -2.21
NIPBL-207ENST00000513819 USP24Q9UPU5 2620 aa1.26□□□□□ -2.21
NIPBL-207ENST00000513819 CDH23Q9H251 3354 aa1.26□□□□□ -2.21
NIPBL-207ENST00000513819 MUC3AQ02505 3323 aa1.26□□□□□ -2.21
NIPBL-207ENST00000513819 SMG1Q96Q15 3661 aaKnown RBP1.26□□□□□ -2.21
NIPBL-207ENST00000513819 UNC79Q9P2D8 2635 aa1.25□□□□□ -2.21
NIPBL-207ENST00000513819 DNAH6Q9C0G6 4158 aa1.25□□□□□ -2.21
NIPBL-207ENST00000513819 PKHD1L1Q86WI1 4243 aa1.25□□□□□ -2.21
NIPBL-207ENST00000513819 PDZD2O15018 2839 aa1.25□□□□□ -2.21
NIPBL-207ENST00000513819 PRKDCP78527 4128 aaKnown RBP1.25□□□□□ -2.21
NIPBL-207ENST00000513819 NBEAL2Q6ZNJ1 2754 aa1.25□□□□□ -2.21
NIPBL-207ENST00000513819 DNAH7Q8WXX0 4024 aa1.24□□□□□ -2.21
NIPBL-207ENST00000513819 STAB2Q8WWQ8 2551 aa1.24□□□□□ -2.21
NIPBL-207ENST00000513819 ANKRD11Q6UB99 2663 aaPredicted RBP1.24□□□□□ -2.21
NIPBL-207ENST00000513819 BDP1A6H8Y1 2624 aa1.24□□□□□ -2.21
NIPBL-207ENST00000513819 TEP1Q99973 2627 aaKnown RBP1.24□□□□□ -2.21
NIPBL-207ENST00000513819 MYO9AB2RTY4 2548 aa1.24□□□□□ -2.21
NIPBL-207ENST00000513819 CEP295Q9C0D2 2601 aa1.23□□□□□ -2.21
NIPBL-207ENST00000513819 MYO18BQ8IUG5 2567 aa1.23□□□□□ -2.21
NIPBL-207ENST00000513819 ZFYVE26Q68DK2 2539 aa1.23□□□□□ -2.21
NIPBL-207ENST00000513819 MXRA5Q9NR99 2828 aa1.22□□□□□ -2.21
NIPBL-207ENST00000513819 NOTCH1P46531 2555 aa1.22□□□□□ -2.21
NIPBL-207ENST00000513819 FLNCQ14315 2725 aa1.22□□□□□ -2.21
NIPBL-207ENST00000513819 FAT3Q8TDW7 4589 aa1.22□□□□□ -2.21
NIPBL-207ENST00000513819 LYSTQ99698 3801 aa1.22□□□□□ -2.21
NIPBL-207ENST00000513819 PKD1L1Q8TDX9 2849 aa1.22□□□□□ -2.21
NIPBL-207ENST00000513819 ATRQ13535 2644 aa1.21□□□□□ -2.22
NIPBL-207ENST00000513819 FBN3Q75N90 2809 aa1.21□□□□□ -2.22
NIPBL-207ENST00000513819 ITPR2Q14571 2701 aa1.21□□□□□ -2.22
NIPBL-207ENST00000513819 KRTAP4-1Q9BYQ7 146 aa1.21□□□□□ -2.22
NIPBL-207ENST00000513819 ZNF469Q96JG9 3925 aaPredicted RBP1.2□□□□□ -2.22
NIPBL-207ENST00000513819 MYO15AQ9UKN7 3530 aa1.2□□□□□ -2.22
NIPBL-207ENST00000513819 HSPG2P98160 4391 aa1.2□□□□□ -2.22
NIPBL-207ENST00000513819 PLECQ15149 4684 aaKnown RBP1.2□□□□□ -2.22
NIPBL-207ENST00000513819 PKD1P98161 4303 aa1.2□□□□□ -2.22
NIPBL-207ENST00000513819 FASNP49327 2511 aaKnown RBP1.2□□□□□ -2.22
NIPBL-207ENST00000513819 EYSQ5T1H1 3165 aa1.2□□□□□ -2.22
NIPBL-207ENST00000513819 HIVEP1P15822 2718 aa1.19□□□□□ -2.22
NIPBL-207ENST00000513819 FCGBPQ9Y6R7 5405 aaPredicted RBP1.19□□□□□ -2.22
NIPBL-207ENST00000513819 SMR3BP02814 79 aaPredicted RBP1.19□□□□□ -2.22
NIPBL-207ENST00000513819 CSMD2Q7Z408 3487 aa1.19□□□□□ -2.22
NIPBL-207ENST00000513819 STAB1Q9NY15 2570 aa1.19□□□□□ -2.22
NIPBL-207ENST00000513819 SVEP1Q4LDE5 3571 aa1.18□□□□□ -2.22
NIPBL-207ENST00000513819 ZANQ9Y493 2812 aa1.18□□□□□ -2.22
NIPBL-207ENST00000513819 DNAH5Q8TE73 4624 aa1.18□□□□□ -2.22
NIPBL-207ENST00000513819 FLGP20930 4061 aaPredicted RBP1.18□□□□□ -2.22
NIPBL-207ENST00000513819 HECTD4Q9Y4D8 3996 aa1.18□□□□□ -2.22
NIPBL-207ENST00000513819 TENM1Q9UKZ4 2725 aa1.17□□□□□ -2.22
NIPBL-207ENST00000513819 POLQO75417 2590 aa1.17□□□□□ -2.22
NIPBL-207ENST00000513819 VPS13CQ709C8 3753 aa1.16□□□□□ -2.22
NIPBL-207ENST00000513819 CUBNO60494 3623 aa1.16□□□□□ -2.22
NIPBL-207ENST00000513819 LRP1Q07954 4544 aaKnown RBP1.16□□□□□ -2.22
NIPBL-207ENST00000513819 TNXBP22105 4242 aa1.15□□□□□ -2.22
NIPBL-207ENST00000513819 FBN2P35556 2912 aa1.15□□□□□ -2.23
NIPBL-207ENST00000513819 ACACBO00763 2458 aa1.13□□□□□ -2.23
NIPBL-207ENST00000513819 FLNAP21333 2647 aaKnown RBP1.13□□□□□ -2.23
NIPBL-207ENST00000513819 PRM1P04553 51 aa1.12□□□□□ -2.23
NIPBL-207ENST00000513819 KRTAP19-5Q3LI72 72 aa1.12□□□□□ -2.23
NIPBL-207ENST00000513819 FAT2Q9NYQ8 4349 aa1.12□□□□□ -2.23
NIPBL-207ENST00000513819 TENM3Q9P273 2699 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms